RNA–Protein interactions for RNA: ENST00000525276.1

CTTN-209, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-209ENST00000525276 NUDT12Q9BQG2 462 aa13.62□□□□□ -0.23
CTTN-209ENST00000525276 MKNK2Q9HBH9 465 aa13.62□□□□□ -0.23
CTTN-209ENST00000525276 ZNF287Q9HBT7 754 aa13.62□□□□□ -0.23
CTTN-209ENST00000525276 EMILIN3Q9NT22 766 aa13.62□□□□□ -0.23
CTTN-209ENST00000525276 FLRT1Q9NZU1 646 aa13.62□□□□□ -0.23
CTTN-209ENST00000525276 CCDC171Q6TFL3 1326 aa13.62□□□□□ -0.23
CTTN-209ENST00000525276 FOXP2O15409 715 aa13.61□□□□□ -0.23
CTTN-209ENST00000525276 SLC3A2P08195 630 aaKnown RBP13.61□□□□□ -0.23
CTTN-209ENST00000525276 ZKSCAN1P17029 563 aaPredicted RBP13.61□□□□□ -0.23
CTTN-209ENST00000525276 USP14P54578 494 aa13.61□□□□□ -0.23
CTTN-209ENST00000525276 IRX3P78415 501 aaPredicted RBP13.61□□□□□ -0.23
CTTN-209ENST00000525276 VPS53Q5VIR6 699 aa13.61□□□□□ -0.23
CTTN-209ENST00000525276 FAM109BQ6ICB4 259 aaPredicted RBP13.61□□□□□ -0.23
CTTN-209ENST00000525276 GPR142Q7Z601 462 aa13.61□□□□□ -0.23
CTTN-209ENST00000525276 MAPK4P31152 587 aa13.6□□□□□ -0.23
CTTN-209ENST00000525276 PPARAQ07869 468 aa13.6□□□□□ -0.23
CTTN-209ENST00000525276 ALX1Q15699 326 aa13.6□□□□□ -0.23
CTTN-209ENST00000525276 CWC27Q6UX04 472 aaKnown RBP13.6□□□□□ -0.23
CTTN-209ENST00000525276 ZNF589Q86UQ0 364 aaPredicted RBP13.6□□□□□ -0.23
CTTN-209ENST00000525276 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.6□□□□□ -0.23
CTTN-209ENST00000525276 STK11IPQ8N1F8 1099 aa13.6□□□□□ -0.23
CTTN-209ENST00000525276 ACER1Q8TDN7 264 aa13.6□□□□□ -0.23
CTTN-209ENST00000525276 C12orf42Q96LP6 360 aa13.6□□□□□ -0.23
CTTN-209ENST00000525276 KIAA1683Q9H0B3 1180 aa13.6□□□□□ -0.23
CTTN-209ENST00000525276 RLFQ13129 1914 aa13.6□□□□□ -0.23
CTTN-209ENST00000525276 HSPD1P10809 573 aaKnown RBP13.59□□□□□ -0.23
CTTN-209ENST00000525276 RASA1P20936 1047 aa13.59□□□□□ -0.23
CTTN-209ENST00000525276 ICA1Q05084 483 aa13.59□□□□□ -0.23
CTTN-209ENST00000525276 PDE4BQ07343 736 aa13.59□□□□□ -0.23
CTTN-209ENST00000525276 ZYXQ15942 572 aaKnown RBP13.59□□□□□ -0.23
CTTN-209ENST00000525276 ZNF444Q8N0Y2 327 aaPredicted RBP13.59□□□□□ -0.23
CTTN-209ENST00000525276 TRPV1Q8NER1 839 aa13.59□□□□□ -0.23
CTTN-209ENST00000525276 APBA2Q99767 749 aa13.59□□□□□ -0.23
CTTN-209ENST00000525276 SH2D4AQ9H788 454 aa13.59□□□□□ -0.23
CTTN-209ENST00000525276 ARHGEF10LQ9HCE6 1279 aa13.59□□□□□ -0.23
CTTN-209ENST00000525276 RGS2P41220 211 aa13.58□□□□□ -0.24
CTTN-209ENST00000525276 PLEKHH3Q7Z736 793 aa13.58□□□□□ -0.24
CTTN-209ENST00000525276 TRMT44Q8IYL2 757 aaKnown RBP13.58□□□□□ -0.24
CTTN-209ENST00000525276 KANSL2Q9H9L4 492 aa13.58□□□□□ -0.24
CTTN-209ENST00000525276 ANAPC4Q9UJX5 808 aa13.58□□□□□ -0.24
CTTN-209ENST00000525276 ZMYM6O95789 1325 aa13.58□□□□□ -0.24
CTTN-209ENST00000525276 MYH8P13535 1937 aa13.57□□□□□ -0.24
CTTN-209ENST00000525276 A0A1W2PRG0 241 aa13.57□□□□□ -0.24
CTTN-209ENST00000525276 PRDM1O75626 825 aa13.57□□□□□ -0.24
CTTN-209ENST00000525276 FGAP02671 866 aa13.57□□□□□ -0.24
CTTN-209ENST00000525276 ATP2B2Q01814 1243 aa13.57□□□□□ -0.24
CTTN-209ENST00000525276 MAP2K5Q13163 448 aa13.57□□□□□ -0.24
CTTN-209ENST00000525276 CLEC10AQ8IUN9 316 aa13.57□□□□□ -0.24
CTTN-209ENST00000525276 RUFY2Q8WXA3 655 aa13.57□□□□□ -0.24
CTTN-209ENST00000525276 FAM161BQ96MY7 647 aa13.57□□□□□ -0.24
CTTN-209ENST00000525276 PAGR1Q9BTK6 254 aa13.57□□□□□ -0.24
CTTN-209ENST00000525276 RAD50Q92878 1312 aa13.57□□□□□ -0.24
CTTN-209ENST00000525276 USP17L15C9J2P7 530 aa13.56□□□□□ -0.24
CTTN-209ENST00000525276 USP17L13C9JLJ4 530 aa13.56□□□□□ -0.24
CTTN-209ENST00000525276 USP17L11C9JVI0 530 aa13.56□□□□□ -0.24
CTTN-209ENST00000525276 USP17L18D6R9N7 530 aa13.56□□□□□ -0.24
CTTN-209ENST00000525276 USP17L22D6RA61 530 aa13.56□□□□□ -0.24
CTTN-209ENST00000525276 USP17L17D6RBQ6 530 aa13.56□□□□□ -0.24
CTTN-209ENST00000525276 USP17L19D6RCP7 530 aa13.56□□□□□ -0.24
CTTN-209ENST00000525276 USP17L20D6RJB6 530 aa13.56□□□□□ -0.24
CTTN-209ENST00000525276 HOXC6P09630 235 aa13.56□□□□□ -0.24
CTTN-209ENST00000525276 EEF2P13639 858 aaKnown RBP13.56□□□□□ -0.24
CTTN-209ENST00000525276 VCAM1P19320 739 aa13.56□□□□□ -0.24
CTTN-209ENST00000525276 CHMLP26374 656 aa13.56□□□□□ -0.24
CTTN-209ENST00000525276 CTDSPL2Q05D32 466 aa13.56□□□□□ -0.24
CTTN-209ENST00000525276 USP17L24Q0WX57 530 aa13.56□□□□□ -0.24
CTTN-209ENST00000525276 ERICH6BQ5W0A0 696 aa13.56□□□□□ -0.24
CTTN-209ENST00000525276 SIAH1Q8IUQ4 282 aa13.56□□□□□ -0.24
CTTN-209ENST00000525276 NPLOC4Q8TAT6 608 aa13.56□□□□□ -0.24
CTTN-209ENST00000525276 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.56□□□□□ -0.24
CTTN-209ENST00000525276 SENP6Q9GZR1 1112 aaPredicted RBP13.56□□□□□ -0.24
CTTN-209ENST00000525276 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.56□□□□□ -0.24
CTTN-209ENST00000525276 TMX2Q9Y320 296 aa13.56□□□□□ -0.24
CTTN-209ENST00000525276 TSPY3P0CV98 308 aa13.55□□□□□ -0.24
CTTN-209ENST00000525276 TSPY8P0CW00 308 aa13.55□□□□□ -0.24
CTTN-209ENST00000525276 ATN1P54259 1190 aaPredicted RBP13.55□□□□□ -0.24
CTTN-209ENST00000525276 GRB14Q14449 540 aa13.55□□□□□ -0.24
CTTN-209ENST00000525276 C9orf50Q5SZB4 431 aa13.55□□□□□ -0.24
CTTN-209ENST00000525276 NEDD1Q8NHV4 660 aa13.55□□□□□ -0.24
CTTN-209ENST00000525276 GTF3C2Q8WUA4 911 aaPredicted RBP13.55□□□□□ -0.24
CTTN-209ENST00000525276 LPAR1Q92633 364 aa13.55□□□□□ -0.24
CTTN-209ENST00000525276 DSCC1Q9BVC3 393 aa13.55□□□□□ -0.24
CTTN-209ENST00000525276 RPAP3Q9H6T3 665 aaPredicted RBP13.55□□□□□ -0.24
CTTN-209ENST00000525276 VCPKMTQ9H867 229 aa13.55□□□□□ -0.24
CTTN-209ENST00000525276 BTBD7Q9P203 1132 aa13.55□□□□□ -0.24
CTTN-209ENST00000525276 DDX20Q9UHI6 824 aaKnown RBP13.55□□□□□ -0.24
CTTN-209ENST00000525276 RABGAP1Q9Y3P9 1069 aa13.55□□□□□ -0.24
CTTN-209ENST00000525276 IGKV6D-41A0A0C4DH26 115 aa13.54□□□□□ -0.24
CTTN-209ENST00000525276 ORC4O43929 436 aa13.54□□□□□ -0.24
CTTN-209ENST00000525276 PTPREP23469 700 aa13.54□□□□□ -0.24
CTTN-209ENST00000525276 RTP1P59025 263 aa13.54□□□□□ -0.24
CTTN-209ENST00000525276 HAND2P61296 217 aa13.54□□□□□ -0.24
CTTN-209ENST00000525276 TFAP4Q01664 338 aa13.54□□□□□ -0.24
CTTN-209ENST00000525276 LBX2Q6XYB7 198 aa13.54□□□□□ -0.24
CTTN-209ENST00000525276 CATSPERGQ6ZRH7 1159 aa13.54□□□□□ -0.24
CTTN-209ENST00000525276 CDX2Q99626 313 aaPredicted RBP13.54□□□□□ -0.24
CTTN-209ENST00000525276 TTYH1Q9H313 450 aaPredicted RBP13.54□□□□□ -0.24
CTTN-209ENST00000525276 GOPCQ9HD26 462 aa13.54□□□□□ -0.24
CTTN-209ENST00000525276 NYAP2Q9P242 653 aa13.54□□□□□ -0.24
CTTN-209ENST00000525276 CTNNA3Q9UI47 895 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms