RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 XKR5Q6UX68 686 aa4.75□□□□□ -1.65
CSDE1-209ENST00000525132 LINC00114Q6XXX2 140 aa4.75□□□□□ -1.65
CSDE1-209ENST00000525132 SVOPQ8N4V2 548 aa4.75□□□□□ -1.65
CSDE1-209ENST00000525132 RGS22Q8NE09 1264 aa4.75□□□□□ -1.65
CSDE1-209ENST00000525132 DDX54Q8TDD1 881 aaKnown RBP4.75□□□□□ -1.65
CSDE1-209ENST00000525132 EDARADDQ8WWZ3 215 aa4.75□□□□□ -1.65
CSDE1-209ENST00000525132 RNF208Q9H0X6 261 aa4.75□□□□□ -1.65
CSDE1-209ENST00000525132 IRF2BPLQ9H1B7 796 aa4.75□□□□□ -1.65
CSDE1-209ENST00000525132 PRDM12Q9H4Q4 367 aa4.75□□□□□ -1.65
CSDE1-209ENST00000525132 ZNF576Q9H609 170 aa4.75□□□□□ -1.65
CSDE1-209ENST00000525132 NAGPAQ9UK23 515 aa4.75□□□□□ -1.65
CSDE1-209ENST00000525132 ANKRD36BQ8N2N9 1353 aa4.75□□□□□ -1.65
CSDE1-209ENST00000525132 ANKRD26Q9UPS8 1709 aa4.75□□□□□ -1.65
CSDE1-209ENST00000525132 LOC400499M0QZD8 3231 aa4.74□□□□□ -1.65
CSDE1-209ENST00000525132 ELOA3CA0A087WX78 387 aaPredicted RBP4.74□□□□□ -1.65
CSDE1-209ENST00000525132 SOWAHDA6NJG2 315 aa4.74□□□□□ -1.65
CSDE1-209ENST00000525132 ELOA3DA6NLF2 546 aaPredicted RBP4.74□□□□□ -1.65
CSDE1-209ENST00000525132 DCXO43602 365 aa4.74□□□□□ -1.65
CSDE1-209ENST00000525132 ITGB2P05107 769 aa4.74□□□□□ -1.65
CSDE1-209ENST00000525132 TSPY4P0CV99 314 aa4.74□□□□□ -1.65
CSDE1-209ENST00000525132 TSPY10P0CW01 314 aa4.74□□□□□ -1.65
CSDE1-209ENST00000525132 EPB42P16452 691 aa4.74□□□□□ -1.65
CSDE1-209ENST00000525132 HMGB2P26583 209 aaKnown RBP4.74□□□□□ -1.65
CSDE1-209ENST00000525132 MZF1P28698 734 aaPredicted RBP4.74□□□□□ -1.65
CSDE1-209ENST00000525132 SOX18P35713 384 aa4.74□□□□□ -1.65
CSDE1-209ENST00000525132 FKBP4Q02790 459 aaKnown RBP eCLIP4.74□□□□□ -1.65
CSDE1-209ENST00000525132 KCNA1Q09470 495 aa4.74□□□□□ -1.65
CSDE1-209ENST00000525132 RSPO4Q2I0M5 234 aaPredicted RBP4.74□□□□□ -1.65
CSDE1-209ENST00000525132 ELOA3BQ3SY89 546 aa4.74□□□□□ -1.65
CSDE1-209ENST00000525132 TMCO4Q5TGY1 634 aa4.74□□□□□ -1.65
CSDE1-209ENST00000525132 RAB44Q7Z6P3 723 aaPredicted RBP4.74□□□□□ -1.65
CSDE1-209ENST00000525132 ZBTB38Q8NAP3 1195 aaPredicted RBP4.74□□□□□ -1.65
CSDE1-209ENST00000525132 ELOA3Q8NG57 546 aa4.74□□□□□ -1.65
CSDE1-209ENST00000525132 NKD2Q969F2 451 aaPredicted RBP4.74□□□□□ -1.65
CSDE1-209ENST00000525132 BTBD6Q96KE9 485 aa4.74□□□□□ -1.65
CSDE1-209ENST00000525132 NEUROD4Q9HD90 331 aa4.74□□□□□ -1.65
CSDE1-209ENST00000525132 MTMR7Q9Y216 660 aa4.74□□□□□ -1.65
CSDE1-209ENST00000525132 NOTCH2Q04721 2471 aa4.74□□□□□ -1.65
CSDE1-209ENST00000525132 DNHD1Q96M86 4753 aa4.74□□□□□ -1.65
CSDE1-209ENST00000525132 POLQO75417 2590 aa4.73□□□□□ -1.65
CSDE1-209ENST00000525132 COL5A3P25940 1745 aaPredicted RBP4.73□□□□□ -1.65
CSDE1-209ENST00000525132 XYLBO75191 536 aa4.73□□□□□ -1.65
CSDE1-209ENST00000525132 FAM13AO94988 1023 aa4.73□□□□□ -1.65
CSDE1-209ENST00000525132 SGPL1O95470 568 aa4.73□□□□□ -1.65
CSDE1-209ENST00000525132 PROS1P07225 676 aa4.73□□□□□ -1.65
CSDE1-209ENST00000525132 NFKB1P19838 968 aa4.73□□□□□ -1.65
CSDE1-209ENST00000525132 POU3F2P20265 443 aaPredicted RBP4.73□□□□□ -1.65
CSDE1-209ENST00000525132 NBL1P41271 181 aa4.73□□□□□ -1.65
CSDE1-209ENST00000525132 SNRPNP63162 240 aaKnown RBP4.73□□□□□ -1.65
CSDE1-209ENST00000525132 GPLD1P80108 840 aa4.73□□□□□ -1.65
CSDE1-209ENST00000525132 GRIK5Q16478 980 aa4.73□□□□□ -1.65
CSDE1-209ENST00000525132 C9orf50Q5SZB4 431 aa4.73□□□□□ -1.65
CSDE1-209ENST00000525132 C2CD5Q86YS7 1000 aa4.73□□□□□ -1.65
CSDE1-209ENST00000525132 RGL4Q8IZJ4 473 aa4.73□□□□□ -1.65
CSDE1-209ENST00000525132 DIS3LQ8TF46 1054 aaKnown RBP4.73□□□□□ -1.65
CSDE1-209ENST00000525132 FAM129BQ96TA1 746 aa4.73□□□□□ -1.65
CSDE1-209ENST00000525132 CHRDQ9H2X0 955 aa4.73□□□□□ -1.65
CSDE1-209ENST00000525132 GGNBP2Q9H3C7 697 aa4.73□□□□□ -1.65
CSDE1-209ENST00000525132 CACNA2D2Q9NY47 1150 aa4.73□□□□□ -1.65
CSDE1-209ENST00000525132 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.73□□□□□ -1.65
CSDE1-209ENST00000525132 KANK1Q14678 1352 aa4.73□□□□□ -1.65
CSDE1-209ENST00000525132 PLEKHH1Q9ULM0 1364 aa4.73□□□□□ -1.65
CSDE1-209ENST00000525132 VPS13AQ96RL7 3174 aa4.73□□□□□ -1.65
CSDE1-209ENST00000525132 FAM205AQ6ZU69 1335 aa4.72□□□□□ -1.65
CSDE1-209ENST00000525132 NAV3Q8IVL0 2385 aa4.72□□□□□ -1.65
CSDE1-209ENST00000525132 KIF4AO95239 1232 aa4.72□□□□□ -1.65
CSDE1-209ENST00000525132 TFRCP02786 760 aaKnown RBP4.72□□□□□ -1.65
CSDE1-209ENST00000525132 TARSP26639 723 aaKnown RBP4.72□□□□□ -1.65
CSDE1-209ENST00000525132 ADH7P40394 386 aa4.72□□□□□ -1.65
CSDE1-209ENST00000525132 NRLP54845 237 aa4.72□□□□□ -1.65
CSDE1-209ENST00000525132 MFAP1P55081 439 aaKnown RBP4.72□□□□□ -1.65
CSDE1-209ENST00000525132 SP3Q02447 781 aa4.72□□□□□ -1.65
CSDE1-209ENST00000525132 TRAPPC3LQ5T215 181 aa4.72□□□□□ -1.65
CSDE1-209ENST00000525132 PDE12Q6L8Q7 609 aaKnown RBP4.72□□□□□ -1.65
CSDE1-209ENST00000525132 CHSY3Q70JA7 882 aa4.72□□□□□ -1.65
CSDE1-209ENST00000525132 MICALL1Q8N3F8 863 aa4.72□□□□□ -1.65
CSDE1-209ENST00000525132 GALNT6Q8NCL4 622 aa4.72□□□□□ -1.65
CSDE1-209ENST00000525132 LINC00116Q8NCU8 138 aa4.72□□□□□ -1.65
CSDE1-209ENST00000525132 OR13H1Q8NG92 308 aa4.72□□□□□ -1.65
CSDE1-209ENST00000525132 GPR152Q8TDT2 470 aa4.72□□□□□ -1.65
CSDE1-209ENST00000525132 NUDT16Q96DE0 195 aaKnown RBP4.72□□□□□ -1.65
CSDE1-209ENST00000525132 ZNF277Q9NRM2 450 aaPredicted RBP4.72□□□□□ -1.65
CSDE1-209ENST00000525132 ADARB2Q9NS39 739 aaKnown RBP4.72□□□□□ -1.65
CSDE1-209ENST00000525132 TLR7Q9NYK1 1049 aaKnown RBP4.72□□□□□ -1.65
CSDE1-209ENST00000525132 GGA3Q9NZ52 723 aa4.72□□□□□ -1.65
CSDE1-209ENST00000525132 SLC6A14Q9UN76 642 aa4.72□□□□□ -1.65
CSDE1-209ENST00000525132 CCNB3Q8WWL7 1395 aa4.72□□□□□ -1.65
CSDE1-209ENST00000525132 MRC1P22897 1456 aa4.72□□□□□ -1.65
CSDE1-209ENST00000525132 KDM3BQ7LBC6 1761 aa4.72□□□□□ -1.65
CSDE1-209ENST00000525132 SPTAN1Q13813 2472 aaKnown RBP4.72□□□□□ -1.65
CSDE1-209ENST00000525132 ZNF646O15015 1829 aaPredicted RBP4.72□□□□□ -1.65
CSDE1-209ENST00000525132 SSC5DA1L4H1 1573 aa4.71□□□□□ -1.66
CSDE1-209ENST00000525132 H3BRB1 525 aa4.71□□□□□ -1.66
CSDE1-209ENST00000525132 MMP20O60882 483 aa4.71□□□□□ -1.66
CSDE1-209ENST00000525132 SASH3O75995 380 aa4.71□□□□□ -1.66
CSDE1-209ENST00000525132 ALBP02768 609 aa4.71□□□□□ -1.66
CSDE1-209ENST00000525132 GCP02774 474 aa4.71□□□□□ -1.66
CSDE1-209ENST00000525132 NID1P14543 1247 aa4.71□□□□□ -1.66
CSDE1-209ENST00000525132 ALKBH2Q6NS38 261 aa4.71□□□□□ -1.66
CSDE1-209ENST00000525132 KANK3Q6NY19 840 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms