RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 PLXNA1Q9UIW2 1896 aa13.29□□□□□ -0.28
TRAPPC4-204ENST00000524797 RPTORQ8N122 1335 aa13.29□□□□□ -0.28
TRAPPC4-204ENST00000524797 CAPN2P17655 700 aa13.29□□□□□ -0.28
TRAPPC4-204ENST00000524797 IRX6P78412 446 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC4-204ENST00000524797 GRB14Q14449 540 aa13.29□□□□□ -0.28
TRAPPC4-204ENST00000524797 CCL14Q16627 93 aa13.29□□□□□ -0.28
TRAPPC4-204ENST00000524797 FAM83BQ5T0W9 1011 aa13.29□□□□□ -0.28
TRAPPC4-204ENST00000524797 MAP3K21Q5TCX8 1036 aa13.29□□□□□ -0.28
TRAPPC4-204ENST00000524797 NEDD1Q8NHV4 660 aa13.29□□□□□ -0.28
TRAPPC4-204ENST00000524797 CRISPLD2Q9H0B8 497 aa13.29□□□□□ -0.28
TRAPPC4-204ENST00000524797 FBXO28Q9NVF7 368 aa13.29□□□□□ -0.28
TRAPPC4-204ENST00000524797 CLIP2Q9UDT6 1046 aa13.29□□□□□ -0.28
TRAPPC4-204ENST00000524797 ADAMTS5Q9UNA0 930 aa13.29□□□□□ -0.28
TRAPPC4-204ENST00000524797 RAD21O60216 631 aa13.28□□□□□ -0.28
TRAPPC4-204ENST00000524797 FARP2O94887 1054 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC4-204ENST00000524797 CTDSPL2Q05D32 466 aa13.28□□□□□ -0.28
TRAPPC4-204ENST00000524797 FAM47AQ5JRC9 791 aa13.28□□□□□ -0.28
TRAPPC4-204ENST00000524797 SAMD1Q6SPF0 538 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC4-204ENST00000524797 MKL1Q969V6 931 aa13.28□□□□□ -0.28
TRAPPC4-204ENST00000524797 CEP95Q96GE4 821 aa13.28□□□□□ -0.28
TRAPPC4-204ENST00000524797 HMX1Q9NP08 348 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC4-204ENST00000524797 MTMR4Q9NYA4 1195 aa13.28□□□□□ -0.28
TRAPPC4-204ENST00000524797 NDUFB10O96000 172 aa13.27□□□□□ -0.28
TRAPPC4-204ENST00000524797 TFRCP02786 760 aaKnown RBP13.27□□□□□ -0.28
TRAPPC4-204ENST00000524797 PRKAR2AP13861 404 aaKnown RBP13.27□□□□□ -0.28
TRAPPC4-204ENST00000524797 TFAP4Q01664 338 aa13.27□□□□□ -0.28
TRAPPC4-204ENST00000524797 ZNF589Q86UQ0 364 aaPredicted RBP13.27□□□□□ -0.28
TRAPPC4-204ENST00000524797 NUP88Q99567 741 aaPredicted RBP13.27□□□□□ -0.28
TRAPPC4-204ENST00000524797 ANAPC4Q9UJX5 808 aa13.27□□□□□ -0.28
TRAPPC4-204ENST00000524797 PPP1R9AQ9ULJ8 1098 aa13.27□□□□□ -0.28
TRAPPC4-204ENST00000524797 TACC3Q9Y6A5 838 aa13.27□□□□□ -0.28
TRAPPC4-204ENST00000524797 IVNS1ABPQ9Y6Y0 642 aa13.27□□□□□ -0.28
TRAPPC4-204ENST00000524797 CCDC171Q6TFL3 1326 aa13.27□□□□□ -0.29
TRAPPC4-204ENST00000524797 F5H6K3 240 aa13.27□□□□□ -0.29
TRAPPC4-204ENST00000524797 HOXC6P09630 235 aa13.27□□□□□ -0.29
TRAPPC4-204ENST00000524797 TSPY3P0CV98 308 aa13.27□□□□□ -0.29
TRAPPC4-204ENST00000524797 TSPY8P0CW00 308 aa13.27□□□□□ -0.29
TRAPPC4-204ENST00000524797 ERCC3P19447 782 aa13.27□□□□□ -0.29
TRAPPC4-204ENST00000524797 SDSP20132 328 aa13.27□□□□□ -0.29
TRAPPC4-204ENST00000524797 KLRC3Q07444 240 aa13.27□□□□□ -0.29
TRAPPC4-204ENST00000524797 CACNB2Q08289 660 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC4-204ENST00000524797 PLS1Q14651 629 aa13.27□□□□□ -0.29
TRAPPC4-204ENST00000524797 TMEM132BQ14DG7 1078 aa13.27□□□□□ -0.29
TRAPPC4-204ENST00000524797 NPLOC4Q8TAT6 608 aa13.27□□□□□ -0.29
TRAPPC4-204ENST00000524797 INCENPQ9NQS7 918 aa13.27□□□□□ -0.29
TRAPPC4-204ENST00000524797 FLRT1Q9NZU1 646 aa13.27□□□□□ -0.29
TRAPPC4-204ENST00000524797 SYNPO2Q9UMS6 1093 aa13.27□□□□□ -0.29
TRAPPC4-204ENST00000524797 TTLL1O95922 423 aa13.26□□□□□ -0.29
TRAPPC4-204ENST00000524797 LRRC47Q8N1G4 583 aaKnown RBP13.26□□□□□ -0.29
TRAPPC4-204ENST00000524797 REPS2Q8NFH8 660 aa13.26□□□□□ -0.29
TRAPPC4-204ENST00000524797 SLF1Q9BQI6 1058 aa13.26□□□□□ -0.29
TRAPPC4-204ENST00000524797 MROH8Q9H579 483 aa13.26□□□□□ -0.29
TRAPPC4-204ENST00000524797 ZMYM6O95789 1325 aa13.26□□□□□ -0.29
TRAPPC4-204ENST00000524797 VWA5AO00534 786 aa13.25□□□□□ -0.29
TRAPPC4-204ENST00000524797 STRNO43815 780 aa13.25□□□□□ -0.29
TRAPPC4-204ENST00000524797 HSPD1P10809 573 aaKnown RBP13.25□□□□□ -0.29
TRAPPC4-204ENST00000524797 PDE4AP27815 886 aa13.25□□□□□ -0.29
TRAPPC4-204ENST00000524797 NCAPG2Q86XI2 1143 aa13.25□□□□□ -0.29
TRAPPC4-204ENST00000524797 GMCL1P1Q8NEA9 526 aa13.25□□□□□ -0.29
TRAPPC4-204ENST00000524797 ORC4O43929 436 aa13.25□□□□□ -0.29
TRAPPC4-204ENST00000524797 SLC25A27O95847 323 aa13.25□□□□□ -0.29
TRAPPC4-204ENST00000524797 FGAP02671 866 aa13.25□□□□□ -0.29
TRAPPC4-204ENST00000524797 ADORA2AP29274 412 aa13.25□□□□□ -0.29
TRAPPC4-204ENST00000524797 CCND3P30281 292 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC4-204ENST00000524797 MFSD14CQ5VZR4 134 aa13.25□□□□□ -0.29
TRAPPC4-204ENST00000524797 RIOX2Q8IUF8 465 aa13.25□□□□□ -0.29
TRAPPC4-204ENST00000524797 IGHA2P01877 340 aa13.24□□□□□ -0.29
TRAPPC4-204ENST00000524797 FGRP09769 529 aa13.24□□□□□ -0.29
TRAPPC4-204ENST00000524797 SLFN13Q68D06 897 aa13.24□□□□□ -0.29
TRAPPC4-204ENST00000524797 DPP9Q86TI2 863 aa13.24□□□□□ -0.29
TRAPPC4-204ENST00000524797 ANKLE1Q8NAG6 615 aa13.24□□□□□ -0.29
TRAPPC4-204ENST00000524797 ZNF214Q9UL59 606 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC4-204ENST00000524797 TSPY2A6NKD2 308 aa13.23□□□□□ -0.29
TRAPPC4-204ENST00000524797 COBLO75128 1261 aa13.23□□□□□ -0.29
TRAPPC4-204ENST00000524797 COPB2P35606 906 aa13.23□□□□□ -0.29
TRAPPC4-204ENST00000524797 STAT3P40763 770 aa13.23□□□□□ -0.29
TRAPPC4-204ENST00000524797 MFAP1P55081 439 aaKnown RBP13.23□□□□□ -0.29
TRAPPC4-204ENST00000524797 PPP4R3BQ5MIZ7 849 aa13.23□□□□□ -0.29
TRAPPC4-204ENST00000524797 ABRAQ8N0Z2 381 aa13.23□□□□□ -0.29
TRAPPC4-204ENST00000524797 DIS3LQ8TF46 1054 aaKnown RBP13.23□□□□□ -0.29
TRAPPC4-204ENST00000524797 HTATIP2Q9BUP3 242 aa13.23□□□□□ -0.29
TRAPPC4-204ENST00000524797 IL17RBQ9NRM6 502 aa13.23□□□□□ -0.29
TRAPPC4-204ENST00000524797 DIAPH3Q9NSV4 1193 aa13.23□□□□□ -0.29
TRAPPC4-204ENST00000524797 OGDHLQ9ULD0 1010 aa13.23□□□□□ -0.29
TRAPPC4-204ENST00000524797 HIP1O00291 1037 aa13.23□□□□□ -0.29
TRAPPC4-204ENST00000524797 RANBP6O60518 1105 aaKnown RBP13.23□□□□□ -0.29
TRAPPC4-204ENST00000524797 MNX1P50219 401 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC4-204ENST00000524797 OLFML2BQ68BL8 750 aa13.23□□□□□ -0.29
TRAPPC4-204ENST00000524797 PRPF38AQ8NAV1 312 aaKnown RBP13.23□□□□□ -0.29
TRAPPC4-204ENST00000524797 DPF3Q92784 378 aa13.23□□□□□ -0.29
TRAPPC4-204ENST00000524797 MMP19Q99542 508 aa13.23□□□□□ -0.29
TRAPPC4-204ENST00000524797 FEM1BQ9UK73 627 aa13.23□□□□□ -0.29
TRAPPC4-204ENST00000524797 CENPFP49454 3210 aa13.22□□□□□ -0.29
TRAPPC4-204ENST00000524797 NMT2O60551 498 aa13.22□□□□□ -0.29
TRAPPC4-204ENST00000524797 FCER1AP12319 257 aa13.22□□□□□ -0.29
TRAPPC4-204ENST00000524797 BMP3P12645 472 aa13.22□□□□□ -0.29
TRAPPC4-204ENST00000524797 NOVP48745 357 aa13.22□□□□□ -0.29
TRAPPC4-204ENST00000524797 HAND2P61296 217 aa13.22□□□□□ -0.29
TRAPPC4-204ENST00000524797 CWC27Q6UX04 472 aaKnown RBP13.22□□□□□ -0.29
TRAPPC4-204ENST00000524797 TRPV1Q8NER1 839 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms