RNA–Protein interactions for RNA: ENST00000524094.1

LINC01339-204, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-204ENST00000524094 ZNF507Q8TCN5 953 aa3.97□□□□□ -1.77
LINC01339-204ENST00000524094 FAM46AQ96IP4 442 aaKnown RBP3.97□□□□□ -1.77
LINC01339-204ENST00000524094 MYRFLQ96LU7 910 aa3.97□□□□□ -1.77
LINC01339-204ENST00000524094 DPH2Q9BQC3 489 aaPredicted RBP3.97□□□□□ -1.77
LINC01339-204ENST00000524094 IFT57Q9NWB7 429 aa3.97□□□□□ -1.77
LINC01339-204ENST00000524094 SUCOQ9UBS9 1254 aaKnown RBP3.97□□□□□ -1.77
LINC01339-204ENST00000524094 KLHL3Q9UH77 587 aa3.97□□□□□ -1.77
LINC01339-204ENST00000524094 SMARCA2P51531 1590 aa3.97□□□□□ -1.77
LINC01339-204ENST00000524094 KDM2BQ8NHM5 1336 aa3.96□□□□□ -1.77
LINC01339-204ENST00000524094 FAM177BA6PVY3 158 aa3.96□□□□□ -1.78
LINC01339-204ENST00000524094 ARNTLO00327 626 aa3.96□□□□□ -1.78
LINC01339-204ENST00000524094 SLITRK5O94991 958 aa3.96□□□□□ -1.78
LINC01339-204ENST00000524094 HOXA10P31260 410 aaPredicted RBP3.96□□□□□ -1.78
LINC01339-204ENST00000524094 CCNFP41002 786 aa3.96□□□□□ -1.78
LINC01339-204ENST00000524094 GRIA2P42262 883 aa3.96□□□□□ -1.78
LINC01339-204ENST00000524094 PREPP48147 710 aa3.96□□□□□ -1.78
LINC01339-204ENST00000524094 ETF1P62495 437 aaKnown RBP3.96□□□□□ -1.78
LINC01339-204ENST00000524094 PDE4BQ07343 736 aa3.96□□□□□ -1.78
LINC01339-204ENST00000524094 CBX2Q14781 532 aaPredicted RBP3.96□□□□□ -1.78
LINC01339-204ENST00000524094 NBPF12Q5TAG4 269 aaPredicted RBP3.96□□□□□ -1.78
LINC01339-204ENST00000524094 YOD1Q5VVQ6 348 aaPredicted RBP3.96□□□□□ -1.78
LINC01339-204ENST00000524094 PRAMEF13Q5VWM6 474 aa3.96□□□□□ -1.78
LINC01339-204ENST00000524094 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.96□□□□□ -1.78
LINC01339-204ENST00000524094 ACAD11Q709F0 780 aa3.96□□□□□ -1.78
LINC01339-204ENST00000524094 ARMC10Q8N2F6 343 aa3.96□□□□□ -1.78
LINC01339-204ENST00000524094 FAM13CQ8NE31 585 aa3.96□□□□□ -1.78
LINC01339-204ENST00000524094 THAP3Q8WTV1 239 aaPredicted RBP3.96□□□□□ -1.78
LINC01339-204ENST00000524094 EZH1Q92800 747 aaPredicted RBP3.96□□□□□ -1.78
LINC01339-204ENST00000524094 GATA6Q92908 595 aa3.96□□□□□ -1.78
LINC01339-204ENST00000524094 RELTQ969Z4 430 aa3.96□□□□□ -1.78
LINC01339-204ENST00000524094 EXOC2Q96KP1 924 aa3.96□□□□□ -1.78
LINC01339-204ENST00000524094 MRGPRX3Q96LB0 322 aa3.96□□□□□ -1.78
LINC01339-204ENST00000524094 CLUHP3Q96NS8 147 aa3.96□□□□□ -1.78
LINC01339-204ENST00000524094 DBNDD2Q9BQY9 259 aa3.96□□□□□ -1.78
LINC01339-204ENST00000524094 SPATA9Q9BWV2 254 aa3.96□□□□□ -1.78
LINC01339-204ENST00000524094 FAM126AQ9BYI3 521 aaPredicted RBP3.96□□□□□ -1.78
LINC01339-204ENST00000524094 KLHL25Q9H0H3 589 aa3.96□□□□□ -1.78
LINC01339-204ENST00000524094 RNF208Q9H0X6 261 aa3.96□□□□□ -1.78
LINC01339-204ENST00000524094 PHAXQ9H814 394 aaKnown RBP3.96□□□□□ -1.78
LINC01339-204ENST00000524094 ARHGEF4Q9NR80 690 aa3.96□□□□□ -1.78
LINC01339-204ENST00000524094 C1GALT1Q9NS00 363 aa3.96□□□□□ -1.78
LINC01339-204ENST00000524094 RAD18Q9NS91 495 aa3.96□□□□□ -1.78
LINC01339-204ENST00000524094 APEX2Q9UBZ4 518 aa3.96□□□□□ -1.78
LINC01339-204ENST00000524094 CCDC39Q9UFE4 941 aa3.96□□□□□ -1.78
LINC01339-204ENST00000524094 PTCH2Q9Y6C5 1203 aa3.96□□□□□ -1.78
LINC01339-204ENST00000524094 U2SURPO15042 1029 aaKnown RBP3.95□□□□□ -1.78
LINC01339-204ENST00000524094 TBX1O43435 398 aa3.95□□□□□ -1.78
LINC01339-204ENST00000524094 LRRN2O75325 713 aa3.95□□□□□ -1.78
LINC01339-204ENST00000524094 ASPAP45381 313 aa3.95□□□□□ -1.78
LINC01339-204ENST00000524094 RAP1GAPP47736 663 aa3.95□□□□□ -1.78
LINC01339-204ENST00000524094 MASP1P48740 699 aa3.95□□□□□ -1.78
LINC01339-204ENST00000524094 RGS19P49795 217 aa3.95□□□□□ -1.78
LINC01339-204ENST00000524094 NCAPHQ15003 741 aa3.95□□□□□ -1.78
LINC01339-204ENST00000524094 NUTM2GQ5VZR2 741 aa3.95□□□□□ -1.78
LINC01339-204ENST00000524094 NFXL1Q6ZNB6 911 aa3.95□□□□□ -1.78
LINC01339-204ENST00000524094 C16orf86Q6ZW13 317 aa3.95□□□□□ -1.78
LINC01339-204ENST00000524094 STAG1Q8WVM7 1258 aa3.95□□□□□ -1.78
LINC01339-204ENST00000524094 FAM84AQ96KN4 292 aa3.95□□□□□ -1.78
LINC01339-204ENST00000524094 CCDC74BQ96LY2 380 aa3.95□□□□□ -1.78
LINC01339-204ENST00000524094 SLC6A18Q96N87 628 aa3.95□□□□□ -1.78
LINC01339-204ENST00000524094 FOXQ1Q9C009 403 aa3.95□□□□□ -1.78
LINC01339-204ENST00000524094 MRPL18Q9H0U6 180 aaKnown RBP3.95□□□□□ -1.78
LINC01339-204ENST00000524094 ATXN3LQ9H3M9 355 aa3.95□□□□□ -1.78
LINC01339-204ENST00000524094 CEP131Q9UPN4 1083 aa3.95□□□□□ -1.78
LINC01339-204ENST00000524094 ZNF451Q9Y4E5 1061 aa3.95□□□□□ -1.78
LINC01339-204ENST00000524094 A0A087X0B3 334 aa3.94□□□□□ -1.78
LINC01339-204ENST00000524094 EOMESO95936 686 aa3.94□□□□□ -1.78
LINC01339-204ENST00000524094 EPHX1P07099 455 aa3.94□□□□□ -1.78
LINC01339-204ENST00000524094 VIL1P09327 827 aaKnown RBP3.94□□□□□ -1.78
LINC01339-204ENST00000524094 HSP90B1P14625 803 aaKnown RBP3.94□□□□□ -1.78
LINC01339-204ENST00000524094 L1CAMP32004 1257 aa3.94□□□□□ -1.78
LINC01339-204ENST00000524094 CHMP4BP1P59074 171 aa3.94□□□□□ -1.78
LINC01339-204ENST00000524094 SLC7A5Q01650 507 aa3.94□□□□□ -1.78
LINC01339-204ENST00000524094 SSRP1Q08945 709 aaKnown RBP3.94□□□□□ -1.78
LINC01339-204ENST00000524094 MESP2Q0VG99 397 aa3.94□□□□□ -1.78
LINC01339-204ENST00000524094 C21orf62-AS1Q17RA5 79 aa3.94□□□□□ -1.78
LINC01339-204ENST00000524094 LONRF2Q1L5Z9 754 aa3.94□□□□□ -1.78
LINC01339-204ENST00000524094 GNPTABQ3T906 1256 aa3.94□□□□□ -1.78
LINC01339-204ENST00000524094 MTERF2Q49AM1 385 aa3.94□□□□□ -1.78
LINC01339-204ENST00000524094 FAM209AQ5JX71 171 aa3.94□□□□□ -1.78
LINC01339-204ENST00000524094 TDRD10Q5VZ19 366 aaKnown RBP3.94□□□□□ -1.78
LINC01339-204ENST00000524094 DCAF15Q66K64 600 aa3.94□□□□□ -1.78
LINC01339-204ENST00000524094 RNF43Q68DV7 783 aa3.94□□□□□ -1.78
LINC01339-204ENST00000524094 DYMQ7RTS9 669 aa3.94□□□□□ -1.78
LINC01339-204ENST00000524094 SMYD4Q8IYR2 804 aaPredicted RBP3.94□□□□□ -1.78
LINC01339-204ENST00000524094 C12orf50Q8NA57 414 aaPredicted RBP3.94□□□□□ -1.78
LINC01339-204ENST00000524094 CYB5D2Q8WUJ1 264 aa3.94□□□□□ -1.78
LINC01339-204ENST00000524094 OSBP2Q969R2 916 aa3.94□□□□□ -1.78
LINC01339-204ENST00000524094 ZNF512BQ96KM6 892 aaPredicted RBP3.94□□□□□ -1.78
LINC01339-204ENST00000524094 C20orf173Q96LM9 149 aa3.94□□□□□ -1.78
LINC01339-204ENST00000524094 BRINP2Q9C0B6 783 aa3.94□□□□□ -1.78
LINC01339-204ENST00000524094 SEMA6CQ9H3T2 930 aa3.94□□□□□ -1.78
LINC01339-204ENST00000524094 CYP4F12Q9HCS2 524 aa3.94□□□□□ -1.78
LINC01339-204ENST00000524094 R3HCC1Q9Y3T6 440 aaKnown RBP3.94□□□□□ -1.78
LINC01339-204ENST00000524094 SLC12A7Q9Y666 1083 aa3.94□□□□□ -1.78
LINC01339-204ENST00000524094 TP53P04637 393 aaPredicted RBP3.93□□□□□ -1.78
LINC01339-204ENST00000524094 ITGAVP06756 1048 aa3.93□□□□□ -1.78
LINC01339-204ENST00000524094 NFICP08651 508 aa3.93□□□□□ -1.78
LINC01339-204ENST00000524094 C6orf222P0C671 652 aaPredicted RBP3.93□□□□□ -1.78
LINC01339-204ENST00000524094 RAG1P15918 1043 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms