RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 ZKSCAN3Q9BRR0 538 aa6.93□□□□□ -1.3
CTNNA1-239ENST00000523685 PBX4Q9BYU1 374 aa6.93□□□□□ -1.3
CTNNA1-239ENST00000523685 BCO2Q9BYV7 579 aa6.93□□□□□ -1.3
CTNNA1-239ENST00000523685 OSBPL7Q9BZF2 842 aa6.93□□□□□ -1.3
CTNNA1-239ENST00000523685 CNTNAP1P78357 1384 aa6.93□□□□□ -1.3
CTNNA1-239ENST00000523685 VIRMAQ69YN4 1812 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-239ENST00000523685 OIP5O43482 229 aa6.92□□□□□ -1.3
CTNNA1-239ENST00000523685 TRPA1O75762 1119 aa6.92□□□□□ -1.3
CTNNA1-239ENST00000523685 BCRP11274 1271 aa6.92□□□□□ -1.3
CTNNA1-239ENST00000523685 EIF4BP23588 611 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-239ENST00000523685 ALDH1B1P30837 517 aa6.92□□□□□ -1.3
CTNNA1-239ENST00000523685 IARSP41252 1262 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-239ENST00000523685 GRM1Q13255 1194 aa6.92□□□□□ -1.3
CTNNA1-239ENST00000523685 GRM2Q14416 872 aa6.92□□□□□ -1.3
CTNNA1-239ENST00000523685 PSAPL1Q6NUJ1 521 aa6.92□□□□□ -1.3
CTNNA1-239ENST00000523685 NXPE4Q6UWF7 544 aa6.92□□□□□ -1.3
CTNNA1-239ENST00000523685 CNTROBQ8N137 903 aa6.92□□□□□ -1.3
CTNNA1-239ENST00000523685 JDP2Q8WYK2 163 aa6.92□□□□□ -1.3
CTNNA1-239ENST00000523685 NXPE3Q969Y0 559 aa6.92□□□□□ -1.3
CTNNA1-239ENST00000523685 PLD4Q96BZ4 506 aa6.92□□□□□ -1.3
CTNNA1-239ENST00000523685 SRCIN1Q9C0H9 1055 aa6.92□□□□□ -1.3
CTNNA1-239ENST00000523685 SMG9Q9H0W8 520 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-239ENST00000523685 RASSF4Q9H2L5 321 aa6.92□□□□□ -1.3
CTNNA1-239ENST00000523685 LIN7BQ9HAP6 207 aa6.92□□□□□ -1.3
CTNNA1-239ENST00000523685 FRRS1LQ9P0K9 344 aa6.92□□□□□ -1.3
CTNNA1-239ENST00000523685 KIAA1522Q9P206 1035 aaPredicted RBP6.92□□□□□ -1.3
CTNNA1-239ENST00000523685 NAGPAQ9UK23 515 aa6.92□□□□□ -1.3
CTNNA1-239ENST00000523685 ABT1Q9ULW3 272 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-239ENST00000523685 RRP7AQ9Y3A4 280 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-239ENST00000523685 PASKQ96RG2 1323 aa6.92□□□□□ -1.3
CTNNA1-239ENST00000523685 FER1L6Q2WGJ9 1857 aa6.92□□□□□ -1.3
CTNNA1-239ENST00000523685 PDE2AO00408 941 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-239ENST00000523685 RGS9O75916 674 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-239ENST00000523685 SMNDC1O75940 238 aaKnown RBP eCLIP6.91□□□□□ -1.3
CTNNA1-239ENST00000523685 MYL6BP14649 208 aa6.91□□□□□ -1.3
CTNNA1-239ENST00000523685 VAMP1P23763 118 aa6.91□□□□□ -1.3
CTNNA1-239ENST00000523685 GPTP24298 496 aa6.91□□□□□ -1.3
CTNNA1-239ENST00000523685 PPP2R1AP30153 589 aa6.91□□□□□ -1.3
CTNNA1-239ENST00000523685 CTCFP49711 727 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-239ENST00000523685 LBX1P52954 281 aa6.91□□□□□ -1.3
CTNNA1-239ENST00000523685 EIF6P56537 245 aaKnown RBP6.91□□□□□ -1.3
CTNNA1-239ENST00000523685 ATP11AP98196 1134 aa6.91□□□□□ -1.3
CTNNA1-239ENST00000523685 MRPL58Q14197 206 aaKnown RBP6.91□□□□□ -1.3
CTNNA1-239ENST00000523685 TAF7Q15545 349 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-239ENST00000523685 LCE2AQ5TA79 106 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-239ENST00000523685 CEP135Q66GS9 1140 aa6.91□□□□□ -1.3
CTNNA1-239ENST00000523685 KIF6Q6ZMV9 814 aa6.91□□□□□ -1.3
CTNNA1-239ENST00000523685 PNMA8AQ86V59 439 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-239ENST00000523685 TMEM102Q8N9M5 508 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-239ENST00000523685 TTC9Q92623 222 aa6.91□□□□□ -1.3
CTNNA1-239ENST00000523685 RPGRQ92834 1020 aaKnown RBP6.91□□□□□ -1.3
CTNNA1-239ENST00000523685 BTBD6Q96KE9 485 aa6.91□□□□□ -1.3
CTNNA1-239ENST00000523685 TCF12Q99081 682 aa6.91□□□□□ -1.3
CTNNA1-239ENST00000523685 LPIN3Q9BQK8 851 aa6.91□□□□□ -1.3
CTNNA1-239ENST00000523685 C12orf49Q9H741 205 aa6.91□□□□□ -1.3
CTNNA1-239ENST00000523685 VTI1BQ9UEU0 232 aa6.91□□□□□ -1.3
CTNNA1-239ENST00000523685 NPC1L1Q9UHC9 1359 aa6.91□□□□□ -1.3
CTNNA1-239ENST00000523685 CACNA1SQ13698 1873 aa6.9□□□□□ -1.3
CTNNA1-239ENST00000523685 KLRG2A4D1S0 409 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-239ENST00000523685 NEFMP07197 916 aa6.9□□□□□ -1.3
CTNNA1-239ENST00000523685 CELA2BP08218 269 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-239ENST00000523685 DEFB115Q30KQ5 88 aa6.9□□□□□ -1.3
CTNNA1-239ENST00000523685 KANK3Q6NY19 840 aa6.9□□□□□ -1.3
CTNNA1-239ENST00000523685 LYPD4Q6UWN0 246 aa6.9□□□□□ -1.3
CTNNA1-239ENST00000523685 TTLL7Q6ZT98 887 aa6.9□□□□□ -1.3
CTNNA1-239ENST00000523685 SLC51AQ86UW1 340 aa6.9□□□□□ -1.3
CTNNA1-239ENST00000523685 CCNJLQ8IV13 435 aa6.9□□□□□ -1.3
CTNNA1-239ENST00000523685 GPC2Q8N158 579 aa6.9□□□□□ -1.3
CTNNA1-239ENST00000523685 GLIS3Q8NEA6 775 aa6.9□□□□□ -1.3
CTNNA1-239ENST00000523685 POP1Q99575 1024 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-239ENST00000523685 NYXQ9GZU5 481 aa6.9□□□□□ -1.3
CTNNA1-239ENST00000523685 PRDM10Q9NQV6 1147 aa6.9□□□□□ -1.3
CTNNA1-239ENST00000523685 STARD13Q9Y3M8 1113 aa6.9□□□□□ -1.3
CTNNA1-239ENST00000523685 ABCC12Q96J65 1359 aa6.9□□□□□ -1.31
CTNNA1-239ENST00000523685 SIPA1L3O60292 1781 aaPredicted RBP6.9□□□□□ -1.31
CTNNA1-239ENST00000523685 FZD9O00144 591 aa6.89□□□□□ -1.31
CTNNA1-239ENST00000523685 HTATSF1O43719 755 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-239ENST00000523685 EPS15P42566 896 aa6.89□□□□□ -1.31
CTNNA1-239ENST00000523685 C20orf204Q6ZNR8 217 aa6.89□□□□□ -1.31
CTNNA1-239ENST00000523685 CHSY3Q70JA7 882 aa6.89□□□□□ -1.31
CTNNA1-239ENST00000523685 WHAMMQ8TF30 809 aa6.89□□□□□ -1.31
CTNNA1-239ENST00000523685 NUDT8Q8WV74 236 aa6.89□□□□□ -1.31
CTNNA1-239ENST00000523685 RBM17Q96I25 401 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-239ENST00000523685 HHIPQ96QV1 700 aa6.89□□□□□ -1.31
CTNNA1-239ENST00000523685 THUMPD2Q9BTF0 503 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-239ENST00000523685 BHLHE41Q9C0J9 482 aaPredicted RBP6.89□□□□□ -1.31
CTNNA1-239ENST00000523685 FAM8A1Q9UBU6 413 aa6.89□□□□□ -1.31
CTNNA1-239ENST00000523685 WDR33Q9C0J8 1336 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-239ENST00000523685 BCORQ6W2J9 1755 aa6.89□□□□□ -1.31
CTNNA1-239ENST00000523685 DICER1Q9UPY3 1922 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-239ENST00000523685 MAP3K15Q6ZN16 1313 aa6.88□□□□□ -1.31
CTNNA1-239ENST00000523685 TMEM238LA0A1B0GVL6 79 aa6.88□□□□□ -1.31
CTNNA1-239ENST00000523685 RASSF10A6NK89 507 aa6.88□□□□□ -1.31
CTNNA1-239ENST00000523685 SHISA8B8ZZ34 492 aa6.88□□□□□ -1.31
CTNNA1-239ENST00000523685 TRAF5O00463 557 aa6.88□□□□□ -1.31
CTNNA1-239ENST00000523685 PPIP5K2O43314 1243 aa6.88□□□□□ -1.31
CTNNA1-239ENST00000523685 HSPA8P11142 646 aaKnown RBP6.88□□□□□ -1.31
CTNNA1-239ENST00000523685 AMPD1P23109 780 aa6.88□□□□□ -1.31
CTNNA1-239ENST00000523685 GSTT1P30711 240 aa6.88□□□□□ -1.31
CTNNA1-239ENST00000523685 MAP3K10Q02779 954 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms