RNA–Protein interactions for RNA: ENST00000523276.1

SHPRH-210, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 2,030 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-210ENST00000523276 HMGB2P26583 209 aaKnown RBP7.62□□□□□ -1.19
SHPRH-210ENST00000523276 GRM4Q14833 912 aa7.62□□□□□ -1.19
SHPRH-210ENST00000523276 TXNRD1Q16881 649 aa7.62□□□□□ -1.19
SHPRH-210ENST00000523276 DNTTIP2Q5QJE6 756 aaKnown RBP7.62□□□□□ -1.19
SHPRH-210ENST00000523276 FOXP4Q8IVH2 680 aaPredicted RBP7.62□□□□□ -1.19
SHPRH-210ENST00000523276 MAPKAPK5Q8IW41 473 aa7.62□□□□□ -1.19
SHPRH-210ENST00000523276 EFCAB3Q8N7B9 438 aa7.62□□□□□ -1.19
SHPRH-210ENST00000523276 PNMA1Q8ND90 353 aa7.62□□□□□ -1.19
SHPRH-210ENST00000523276 TBC1D22AQ8WUA7 517 aa7.62□□□□□ -1.19
SHPRH-210ENST00000523276 FAM163AQ96GL9 167 aaPredicted RBP7.62□□□□□ -1.19
SHPRH-210ENST00000523276 CSRNP2Q9H175 543 aa7.62□□□□□ -1.19
SHPRH-210ENST00000523276 PCDHA5Q9Y5H7 936 aa7.62□□□□□ -1.19
SHPRH-210ENST00000523276 GAKO14976 1311 aa7.62□□□□□ -1.19
SHPRH-210ENST00000523276 WNT7AO00755 349 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 PPEF1O14829 653 aaPredicted RBP7.61□□□□□ -1.19
SHPRH-210ENST00000523276 FOXN1O15353 648 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 ACTN4O43707 911 aaKnown RBP7.61□□□□□ -1.19
SHPRH-210ENST00000523276 TSPY3P0CV98 308 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 TSPY8P0CW00 308 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 RASA1P20936 1047 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 TRAPPC10P48553 1259 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 GNAQP50148 359 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 PLCD1P51178 756 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 NLRP5P59047 1200 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 MYL5Q02045 173 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 POSTNQ15063 836 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 NOM1Q5C9Z4 860 aaKnown RBP7.61□□□□□ -1.19
SHPRH-210ENST00000523276 TTC38Q5R3I4 469 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 NT5DC1Q5TFE4 455 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 TMCO4Q5TGY1 634 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 ISM2Q6H9L7 571 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 KANK3Q6NY19 840 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 OLFM4Q6UX06 510 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 SLF2Q8IX21 1173 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 PARP9Q8IXQ6 854 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 TEX11Q8IYF3 940 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 ZNF444Q8N0Y2 327 aaPredicted RBP7.61□□□□□ -1.19
SHPRH-210ENST00000523276 SLC44A5Q8NCS7 719 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 FERMT2Q96AC1 680 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 SH3GLB2Q9NR46 395 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 SAP30BPQ9UHR5 308 aaKnown RBP7.61□□□□□ -1.19
SHPRH-210ENST00000523276 SERTAD1Q9UHV2 236 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 ARIH1Q9Y4X5 557 aaPredicted RBP7.61□□□□□ -1.19
SHPRH-210ENST00000523276 FAM205AQ6ZU69 1335 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 CCDC88AQ3V6T2 1871 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 UQCRHLA0A096LP55 91 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 USP17L3A6NCW0 530 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 USP17L4A6NCW7 530 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 C6orf229H3BNL8 230 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 MYO1BO43795 1136 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 UQCRHP07919 91 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 VEGFAP15692 232 aaPredicted RBP7.61□□□□□ -1.19
SHPRH-210ENST00000523276 CALML3P27482 149 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 SARSP49591 514 aaKnown RBP7.61□□□□□ -1.19
SHPRH-210ENST00000523276 RHBDL3P58872 404 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 MFSD10Q14728 455 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 MFSD14BQ5SR56 506 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 C16orf86Q6ZW13 317 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 USP49Q70CQ1 688 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 USP17L1Q7RTZ2 530 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 LRRC8AQ8IWT6 810 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 SP8Q8IXZ3 490 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 POM121Q96HA1 1249 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 PRIMPOLQ96LW4 560 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 XPO4Q9C0E2 1151 aaKnown RBP7.61□□□□□ -1.19
SHPRH-210ENST00000523276 OSBPL5Q9H0X9 879 aaPredicted RBP7.61□□□□□ -1.19
SHPRH-210ENST00000523276 HSD3B7Q9H2F3 369 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 ZNF287Q9HBT7 754 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 IFNKQ9P0W0 207 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 IMPACTQ9P2X3 320 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 MAD2L2Q9UI95 211 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 MAN1B1Q9UKM7 699 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 SNED1Q8TER0 1413 aa7.61□□□□□ -1.19
SHPRH-210ENST00000523276 LRRC37AA6NMS7 1700 aa7.6□□□□□ -1.19
SHPRH-210ENST00000523276 FLT1P17948 1338 aa7.6□□□□□ -1.19
SHPRH-210ENST00000523276 SMC2O95347 1197 aa7.6□□□□□ -1.19
SHPRH-210ENST00000523276 BMP6P22004 513 aa7.6□□□□□ -1.19
SHPRH-210ENST00000523276 CDK8P49336 464 aa7.6□□□□□ -1.19
SHPRH-210ENST00000523276 GSDMDP57764 484 aa7.6□□□□□ -1.19
SHPRH-210ENST00000523276 ATP2C1P98194 919 aaPredicted RBP7.6□□□□□ -1.19
SHPRH-210ENST00000523276 FANCCQ00597 558 aa7.6□□□□□ -1.19
SHPRH-210ENST00000523276 LTBP1Q14766 1721 aa7.6□□□□□ -1.19
SHPRH-210ENST00000523276 ARID5BQ14865 1188 aa7.6□□□□□ -1.19
SHPRH-210ENST00000523276 ZNF174Q15697 407 aa7.6□□□□□ -1.19
SHPRH-210ENST00000523276 FILIP1Q7Z7B0 1213 aa7.6□□□□□ -1.19
SHPRH-210ENST00000523276 STAG2Q8N3U4 1231 aa7.6□□□□□ -1.19
SHPRH-210ENST00000523276 TRIML1Q8N9V2 468 aa7.6□□□□□ -1.19
SHPRH-210ENST00000523276 RETREG2Q8NC44 543 aa7.6□□□□□ -1.19
SHPRH-210ENST00000523276 SMARCE1Q969G3 411 aa7.6□□□□□ -1.19
SHPRH-210ENST00000523276 DDX27Q96GQ7 796 aaKnown RBP7.6□□□□□ -1.19
SHPRH-210ENST00000523276 TMEM47Q9BQJ4 181 aa7.6□□□□□ -1.19
SHPRH-210ENST00000523276 ATP6V0A2Q9Y487 856 aa7.6□□□□□ -1.19
SHPRH-210ENST00000523276 MYH2Q9UKX2 1941 aa7.6□□□□□ -1.19
SHPRH-210ENST00000523276 NAV1Q8NEY1 1877 aa7.6□□□□□ -1.19
SHPRH-210ENST00000523276 DDX60LQ5H9U9 1706 aaKnown RBP7.59□□□□□ -1.19
SHPRH-210ENST00000523276 A0A087X0B3 334 aa7.59□□□□□ -1.19
SHPRH-210ENST00000523276 PALM3A6NDB9 673 aaPredicted RBP7.59□□□□□ -1.19
SHPRH-210ENST00000523276 GPR37O15354 613 aa7.59□□□□□ -1.19
SHPRH-210ENST00000523276 LMOD1P29536 600 aaPredicted RBP7.59□□□□□ -1.19
SHPRH-210ENST00000523276 CCZ1BP86790 482 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms