RNA–Protein interactions for RNA: ENST00000523271.1

EXTL3-214, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 2

Gene EXTL3, Length 8,257 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-214ENST00000523271 MRPL44Q9H9J2 332 aaKnown RBP13.59□□□□□ -0.23
EXTL3-214ENST00000523271 NSD2O96028 1365 aa13.58□□□□□ -0.23
EXTL3-214ENST00000523271 FBXW4P57775 412 aa13.58□□□□□ -0.23
EXTL3-214ENST00000523271 RCN2Q14257 317 aa13.58□□□□□ -0.23
EXTL3-214ENST00000523271 RPSAP08865 295 aaKnown RBP13.58□□□□□ -0.24
EXTL3-214ENST00000523271 PARD3BQ8TEW8 1205 aa13.58□□□□□ -0.24
EXTL3-214ENST00000523271 ATP6V1E2Q96A05 226 aa13.58□□□□□ -0.24
EXTL3-214ENST00000523271 HELLSQ9NRZ9 838 aa13.58□□□□□ -0.24
EXTL3-214ENST00000523271 IFNB1P01574 187 aa13.58□□□□□ -0.24
EXTL3-214ENST00000523271 WAPLQ7Z5K2 1190 aa13.58□□□□□ -0.24
EXTL3-214ENST00000523271 STX19Q8N4C7 294 aa13.58□□□□□ -0.24
EXTL3-214ENST00000523271 CREB3O43889 395 aa13.58□□□□□ -0.24
EXTL3-214ENST00000523271 HDAC4P56524 1084 aa13.58□□□□□ -0.24
EXTL3-214ENST00000523271 TRMT10CQ7L0Y3 403 aaKnown RBP13.58□□□□□ -0.24
EXTL3-214ENST00000523271 DCLK2Q8N568 766 aa13.58□□□□□ -0.24
EXTL3-214ENST00000523271 MKL2Q9ULH7 1088 aa13.58□□□□□ -0.24
EXTL3-214ENST00000523271 GCNT3O95395 438 aa13.58□□□□□ -0.24
EXTL3-214ENST00000523271 KRT19P08727 400 aa13.58□□□□□ -0.24
EXTL3-214ENST00000523271 GNL1P36915 607 aaPredicted RBP13.58□□□□□ -0.24
EXTL3-214ENST00000523271 POLE2P56282 527 aa13.58□□□□□ -0.24
EXTL3-214ENST00000523271 ACBD5Q5T8D3 534 aaPredicted RBP13.58□□□□□ -0.24
EXTL3-214ENST00000523271 OR9Q1Q8NGQ5 310 aa13.58□□□□□ -0.24
EXTL3-214ENST00000523271 RNF217Q8TC41 542 aa13.58□□□□□ -0.24
EXTL3-214ENST00000523271 TSC22D3Q99576 134 aa13.58□□□□□ -0.24
EXTL3-214ENST00000523271 PICK1Q9NRD5 415 aa13.58□□□□□ -0.24
EXTL3-214ENST00000523271 FGFR1OP2Q9NVK5 253 aa13.58□□□□□ -0.24
EXTL3-214ENST00000523271 EXOC5O00471 708 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 SAT1P21673 171 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 NME8Q8N427 588 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 PHKBQ93100 1093 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 SNX21Q969T3 373 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 SNAPC4Q5SXM2 1469 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 PYGBP11216 843 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 ATF2P15336 505 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 CD19P15391 556 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 DAB2P98082 770 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 TTC19Q6DKK2 380 aaPredicted RBP13.57□□□□□ -0.24
EXTL3-214ENST00000523271 MLKLQ8NB16 471 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.57□□□□□ -0.24
EXTL3-214ENST00000523271 NYXQ9GZU5 481 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 ARHGEF10LQ9HCE6 1279 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 TROQ12816 1431 aaPredicted RBP13.57□□□□□ -0.24
EXTL3-214ENST00000523271 ZNF263O14978 683 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 BCAS4Q8TDM0 211 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 LRRC2Q9BYS8 371 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 AZI2Q9H6S1 392 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 BZW2Q9Y6E2 419 aaKnown RBP13.57□□□□□ -0.24
EXTL3-214ENST00000523271 PASKQ96RG2 1323 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 GUCY2FP51841 1108 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 SF3A3Q12874 501 aaKnown RBP eCLIP13.57□□□□□ -0.24
EXTL3-214ENST00000523271 PGBD1Q96JS3 809 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 SMYD2Q9NRG4 433 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 IFT140Q96RY7 1462 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 FAM69CQ0P6D2 419 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 TRIML2Q8N7C3 387 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 CACTINQ8WUQ7 758 aaKnown RBP13.57□□□□□ -0.24
EXTL3-214ENST00000523271 INTS4Q96HW7 963 aaKnown RBP13.57□□□□□ -0.24
EXTL3-214ENST00000523271 DACH2Q96NX9 599 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 MYO1AQ9UBC5 1043 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 ANKLE2Q86XL3 938 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 MED10Q9BTT4 135 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 APOA1P02647 267 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 SETDB2Q96T68 719 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 ATP6V0A4Q9HBG4 840 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 PAG1Q9NWQ8 432 aa13.57□□□□□ -0.24
EXTL3-214ENST00000523271 ATF7P17544 494 aaPredicted RBP13.56□□□□□ -0.24
EXTL3-214ENST00000523271 MAGEA1P43355 309 aa13.56□□□□□ -0.24
EXTL3-214ENST00000523271 BBS5Q8N3I7 341 aa13.56□□□□□ -0.24
EXTL3-214ENST00000523271 MCM9Q9NXL9 1143 aa13.56□□□□□ -0.24
EXTL3-214ENST00000523271 CARSP49589 748 aaKnown RBP13.56□□□□□ -0.24
EXTL3-214ENST00000523271 LETM2Q2VYF4 491 aa13.56□□□□□ -0.24
EXTL3-214ENST00000523271 GJC2Q5T442 439 aaPredicted RBP13.56□□□□□ -0.24
EXTL3-214ENST00000523271 PPP4R4Q6NUP7 873 aa13.56□□□□□ -0.24
EXTL3-214ENST00000523271 PLIN2Q99541 437 aa13.56□□□□□ -0.24
EXTL3-214ENST00000523271 DNM3Q9UQ16 869 aa13.56□□□□□ -0.24
EXTL3-214ENST00000523271 PPP1R12AO14974 1030 aaPredicted RBP13.56□□□□□ -0.24
EXTL3-214ENST00000523271 CHCHD3Q9NX63 227 aaKnown RBP13.56□□□□□ -0.24
EXTL3-214ENST00000523271 C9orf84Q5VXU9 1444 aa13.56□□□□□ -0.24
EXTL3-214ENST00000523271 TMEM232C9JQI7 657 aa13.56□□□□□ -0.24
EXTL3-214ENST00000523271 F6X3S4 739 aa13.56□□□□□ -0.24
EXTL3-214ENST00000523271 SERPINB10P48595 397 aa13.56□□□□□ -0.24
EXTL3-214ENST00000523271 SLC9C2Q5TAH2 1124 aa13.56□□□□□ -0.24
EXTL3-214ENST00000523271 COG4Q9H9E3 785 aa13.56□□□□□ -0.24
EXTL3-214ENST00000523271 XPAP23025 273 aaPredicted RBP13.56□□□□□ -0.24
EXTL3-214ENST00000523271 ZFYVE1Q9HBF4 777 aa13.56□□□□□ -0.24
EXTL3-214ENST00000523271 SLC52A1Q9NWF4 448 aa13.56□□□□□ -0.24
EXTL3-214ENST00000523271 DBNLQ9UJU6 430 aaKnown RBP13.56□□□□□ -0.24
EXTL3-214ENST00000523271 MRPS15P82914 257 aaKnown RBP13.55□□□□□ -0.24
EXTL3-214ENST00000523271 KIAA2013Q8IYS2 634 aa13.55□□□□□ -0.24
EXTL3-214ENST00000523271 CCDC51Q96ER9 411 aa13.55□□□□□ -0.24
EXTL3-214ENST00000523271 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.55□□□□□ -0.24
EXTL3-214ENST00000523271 LIG3P49916 1009 aa13.55□□□□□ -0.24
EXTL3-214ENST00000523271 BLVRAP53004 296 aa13.55□□□□□ -0.24
EXTL3-214ENST00000523271 YARSP54577 528 aaKnown RBP13.55□□□□□ -0.24
EXTL3-214ENST00000523271 ENOX1Q8TC92 643 aaKnown RBP13.55□□□□□ -0.24
EXTL3-214ENST00000523271 STAT1P42224 750 aa13.55□□□□□ -0.24
EXTL3-214ENST00000523271 CEP70Q8NHQ1 597 aa13.55□□□□□ -0.24
EXTL3-214ENST00000523271 PSMB7Q99436 277 aa13.55□□□□□ -0.24
EXTL3-214ENST00000523271 ESYT1Q9BSJ8 1104 aa13.55□□□□□ -0.24
EXTL3-214ENST00000523271 KRT87PA6NCN2 255 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms