RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 BAZ2BQ9UIF8 2168 aaKnown RBP17.83■□□□□ 0.45
CTNNA1-236ENST00000522792 CCDC96Q2M329 555 aa17.83■□□□□ 0.45
CTNNA1-236ENST00000522792 OXER1Q8TDS5 423 aa17.83■□□□□ 0.45
CTNNA1-236ENST00000522792 GPKOWQ92917 476 aaPredicted RBP eCLIP17.83■□□□□ 0.45
CTNNA1-236ENST00000522792 TEPSINQ96N21 525 aa17.83■□□□□ 0.45
CTNNA1-236ENST00000522792 VAT1LQ9HCJ6 419 aa17.83■□□□□ 0.45
CTNNA1-236ENST00000522792 ISY1Q9ULR0 285 aaKnown RBP17.83■□□□□ 0.45
CTNNA1-236ENST00000522792 TBC1D12O60347 775 aa17.82■□□□□ 0.44
CTNNA1-236ENST00000522792 SNHG28P0DPA3 235 aa17.82■□□□□ 0.44
CTNNA1-236ENST00000522792 U2AF2P26368 475 aaKnown RBP eCLIP17.82■□□□□ 0.442e-14■■■□□ 16.5
CTNNA1-236ENST00000522792 ASPRV1Q53RT3 343 aa17.82■□□□□ 0.44
CTNNA1-236ENST00000522792 CAVIN1Q6NZI2 390 aaKnown RBP17.82■□□□□ 0.44
CTNNA1-236ENST00000522792 PHF20Q9BVI0 1012 aa17.82■□□□□ 0.44
CTNNA1-236ENST00000522792 DEFB129Q9H1M3 183 aa17.82■□□□□ 0.44
CTNNA1-236ENST00000522792 RBM27Q9P2N5 1060 aaKnown RBP17.82■□□□□ 0.44
CTNNA1-236ENST00000522792 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.82■□□□□ 0.44
CTNNA1-236ENST00000522792 MBD3O95983 291 aa17.82■□□□□ 0.44
CTNNA1-236ENST00000522792 UBE2HP62256 183 aa17.82■□□□□ 0.44
CTNNA1-236ENST00000522792 NR5A1Q13285 461 aa17.82■□□□□ 0.44
CTNNA1-236ENST00000522792 GPR162Q16538 588 aa17.82■□□□□ 0.44
CTNNA1-236ENST00000522792 HOMER1Q86YM7 354 aa17.82■□□□□ 0.44
CTNNA1-236ENST00000522792 MKL1Q969V6 931 aa17.82■□□□□ 0.44
CTNNA1-236ENST00000522792 SPZ1Q9BXG8 430 aa17.82■□□□□ 0.44
CTNNA1-236ENST00000522792 ZBTB21Q9ULJ3 1066 aa17.82■□□□□ 0.44
CTNNA1-236ENST00000522792 ELP1O95163 1332 aa17.81■□□□□ 0.44
CTNNA1-236ENST00000522792 HIRAP54198 1017 aaPredicted RBP17.81■□□□□ 0.44
CTNNA1-236ENST00000522792 ZNF543Q08ER8 600 aa17.81■□□□□ 0.44
CTNNA1-236ENST00000522792 KCTD1Q719H9 257 aa17.81■□□□□ 0.44
CTNNA1-236ENST00000522792 CLIC4Q9Y696 253 aa17.81■□□□□ 0.44
CTNNA1-236ENST00000522792 SLFN13Q68D06 897 aa17.81■□□□□ 0.44
CTNNA1-236ENST00000522792 TTBK2Q6IQ55 1244 aa17.81■□□□□ 0.44
CTNNA1-236ENST00000522792 HEATR3Q7Z4Q2 680 aa17.81■□□□□ 0.44
CTNNA1-236ENST00000522792 NOSTRINQ8IVI9 506 aa17.81■□□□□ 0.44
CTNNA1-236ENST00000522792 GGA3Q9NZ52 723 aa17.81■□□□□ 0.44
CTNNA1-236ENST00000522792 KRT2P35908 639 aa17.8■□□□□ 0.44
CTNNA1-236ENST00000522792 NLRP5P59047 1200 aa17.8■□□□□ 0.44
CTNNA1-236ENST00000522792 PRAMEF18Q5VWM3 479 aa17.8■□□□□ 0.44
CTNNA1-236ENST00000522792 WWC2Q6AWC2 1192 aa17.8■□□□□ 0.44
CTNNA1-236ENST00000522792 ATL3Q6DD88 541 aa17.8■□□□□ 0.44
CTNNA1-236ENST00000522792 PIGSQ96S52 555 aa17.8■□□□□ 0.44
CTNNA1-236ENST00000522792 FOXP1Q9H334 677 aaPredicted RBP17.8■□□□□ 0.44
CTNNA1-236ENST00000522792 A0A1W2PRG0 241 aa17.79■□□□□ 0.44
CTNNA1-236ENST00000522792 LMOD1P29536 600 aaPredicted RBP17.79■□□□□ 0.44
CTNNA1-236ENST00000522792 SLC16A2P36021 539 aa17.79■□□□□ 0.44
CTNNA1-236ENST00000522792 CAP2P40123 477 aa17.79■□□□□ 0.44
CTNNA1-236ENST00000522792 NBPF12Q5TAG4 269 aaPredicted RBP17.79■□□□□ 0.44
CTNNA1-236ENST00000522792 APOBEC3FQ8IUX4 373 aaKnown RBP17.79■□□□□ 0.44
CTNNA1-236ENST00000522792 RRP36Q96EU6 259 aaKnown RBP17.79■□□□□ 0.44
CTNNA1-236ENST00000522792 F5H6K3 240 aa17.79■□□□□ 0.44
CTNNA1-236ENST00000522792 ECE1P42892 770 aa17.79■□□□□ 0.44
CTNNA1-236ENST00000522792 SLC1A4P43007 532 aa17.79■□□□□ 0.44
CTNNA1-236ENST00000522792 MAP3K10Q02779 954 aa17.79■□□□□ 0.44
CTNNA1-236ENST00000522792 KLRC3Q07444 240 aa17.79■□□□□ 0.44
CTNNA1-236ENST00000522792 TYW1BQ6NUM6 668 aa17.79■□□□□ 0.44
CTNNA1-236ENST00000522792 ACER1Q8TDN7 264 aa17.79■□□□□ 0.44
CTNNA1-236ENST00000522792 PGBD1Q96JS3 809 aa17.79■□□□□ 0.44
CTNNA1-236ENST00000522792 RIOX1Q9H6W3 641 aa17.79■□□□□ 0.44
CTNNA1-236ENST00000522792 RTEL1Q9NZ71 1219 aa17.79■□□□□ 0.44
CTNNA1-236ENST00000522792 SEC63Q9UGP8 760 aaKnown RBP17.79■□□□□ 0.44
CTNNA1-236ENST00000522792 RCOR1Q9UKL0 485 aa17.79■□□□□ 0.44
CTNNA1-236ENST00000522792 ADAMTS3O15072 1205 aa17.78■□□□□ 0.44
CTNNA1-236ENST00000522792 SMARCA1P28370 1054 aa17.78■□□□□ 0.44
CTNNA1-236ENST00000522792 GSE1Q14687 1217 aa17.78■□□□□ 0.44
CTNNA1-236ENST00000522792 NPY5RQ15761 445 aa17.78■□□□□ 0.44
CTNNA1-236ENST00000522792 GPATCH4Q5T3I0 446 aaKnown RBP17.78■□□□□ 0.44
CTNNA1-236ENST00000522792 CCDC84Q86UT8 332 aaPredicted RBP17.78■□□□□ 0.44
CTNNA1-236ENST00000522792 NUP88Q99567 741 aaPredicted RBP17.78■□□□□ 0.44
CTNNA1-236ENST00000522792 GOLGA6L4A6NEF3 574 aa17.77■□□□□ 0.44
CTNNA1-236ENST00000522792 FAM205CA6NFA0 338 aa17.77■□□□□ 0.44
CTNNA1-236ENST00000522792 PHF20L1A8MW92 1017 aa17.77■□□□□ 0.44
CTNNA1-236ENST00000522792 STXBP3O00186 592 aa17.77■□□□□ 0.44
CTNNA1-236ENST00000522792 NDUFB10O96000 172 aa17.77■□□□□ 0.44
CTNNA1-236ENST00000522792 STK38Q15208 465 aa17.77■□□□□ 0.44
CTNNA1-236ENST00000522792 ANO1Q5XXA6 986 aa17.77■□□□□ 0.44
CTNNA1-236ENST00000522792 DCAF4Q8WV16 495 aa17.77■□□□□ 0.44
CTNNA1-236ENST00000522792 ARHGEF10LQ9HCE6 1279 aa17.77■□□□□ 0.44
CTNNA1-236ENST00000522792 BRMS1Q9HCU9 246 aa17.77■□□□□ 0.44
CTNNA1-236ENST00000522792 TMEM63CQ9P1W3 806 aa17.77■□□□□ 0.44
CTNNA1-236ENST00000522792 NOM1Q5C9Z4 860 aaKnown RBP17.77■□□□□ 0.43
CTNNA1-236ENST00000522792 ADGRF4Q8IZF3 695 aa17.77■□□□□ 0.43
CTNNA1-236ENST00000522792 GMCL1P1Q8NEA9 526 aa17.77■□□□□ 0.43
CTNNA1-236ENST00000522792 POLR3EQ9NVU0 708 aa17.77■□□□□ 0.43
CTNNA1-236ENST00000522792 BARHL2Q9NY43 387 aa17.77■□□□□ 0.43
CTNNA1-236ENST00000522792 SF3A1Q15459 793 aaKnown RBP17.76■□□□□ 0.43
CTNNA1-236ENST00000522792 EARS2Q5JPH6 523 aaKnown RBP17.76■□□□□ 0.43
CTNNA1-236ENST00000522792 SPICE1Q8N0Z3 855 aa17.76■□□□□ 0.43
CTNNA1-236ENST00000522792 LINC00301Q8NCQ3 95 aa17.76■□□□□ 0.43
CTNNA1-236ENST00000522792 JMJD4Q9H9V9 463 aa17.76■□□□□ 0.43
CTNNA1-236ENST00000522792 SH3GLB2Q9NR46 395 aa17.76■□□□□ 0.43
CTNNA1-236ENST00000522792 ADARB2Q9NS39 739 aaKnown RBP17.76■□□□□ 0.43
CTNNA1-236ENST00000522792 USP17L10C9JJH3 530 aa17.76■□□□□ 0.43
CTNNA1-236ENST00000522792 ATP2B1P20020 1258 aa17.76■□□□□ 0.43
CTNNA1-236ENST00000522792 ME1P48163 572 aa17.76■□□□□ 0.43
CTNNA1-236ENST00000522792 NASPP49321 788 aaPredicted RBP17.76■□□□□ 0.43
CTNNA1-236ENST00000522792 ZYXQ15942 572 aaKnown RBP17.76■□□□□ 0.43
CTNNA1-236ENST00000522792 BICD2Q8TD16 824 aa17.76■□□□□ 0.43
CTNNA1-236ENST00000522792 GLIS2Q9BZE0 524 aaPredicted RBP17.76■□□□□ 0.43
CTNNA1-236ENST00000522792 FZD1Q9UP38 647 aa17.76■□□□□ 0.43
CTNNA1-236ENST00000522792 YEATS4O95619 227 aa17.75■□□□□ 0.43
CTNNA1-236ENST00000522792 ASNSP08243 561 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms