RNA–Protein interactions for RNA: ENST00000522721.1

SORBS3-215, Transcript of sorbin and SH3 domain containing 3, human

TSL 4

Gene SORBS3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS3-215	ENST00000522721	SHCBP1	Q8NEM2	672 aa		27.66	■■■□□ 2.02
SORBS3-215	ENST00000522721	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	27.66	■■■□□ 2.02	9e-9	■□□□□ 8.4
SORBS3-215	ENST00000522721	CLIP2	Q9UDT6	1046 aa		27.66	■■■□□ 2.02
SORBS3-215	ENST00000522721	ZMYM6	O95789	1325 aa		27.66	■■■□□ 2.02
SORBS3-215	ENST00000522721		F5H6K3	240 aa		27.65	■■■□□ 2.02
SORBS3-215	ENST00000522721	NDUFB10	O96000	172 aa		27.65	■■■□□ 2.02
SORBS3-215	ENST00000522721	HSPD1	P10809	573 aa	Known RBP	27.65	■■■□□ 2.02
SORBS3-215	ENST00000522721	KLRC3	Q07444	240 aa		27.65	■■■□□ 2.02
SORBS3-215	ENST00000522721	CCL14	Q16627	93 aa		27.65	■■■□□ 2.02
SORBS3-215	ENST00000522721	FAM47A	Q5JRC9	791 aa		27.65	■■■□□ 2.02
SORBS3-215	ENST00000522721	TRMT44	Q8IYL2	757 aa	Known RBP	27.65	■■■□□ 2.02
SORBS3-215	ENST00000522721	CRISPLD2	Q9H0B8	497 aa		27.65	■■■□□ 2.02
SORBS3-215	ENST00000522721	PPP1R9A	Q9ULJ8	1098 aa		27.65	■■■□□ 2.02
SORBS3-215	ENST00000522721	SYNPO2	Q9UMS6	1093 aa		27.65	■■■□□ 2.02
SORBS3-215	ENST00000522721	CCDC171	Q6TFL3	1326 aa		27.65	■■■□□ 2.02
SORBS3-215	ENST00000522721	RPTOR	Q8N122	1335 aa		27.65	■■■□□ 2.02
SORBS3-215	ENST00000522721	FGA	P02671	866 aa		27.64	■■■□□ 2.02
SORBS3-215	ENST00000522721	HOXC6	P09630	235 aa		27.64	■■■□□ 2.02
SORBS3-215	ENST00000522721	FGR	P09769	529 aa		27.64	■■■□□ 2.02
SORBS3-215	ENST00000522721	TSPY3	P0CV98	308 aa		27.64	■■■□□ 2.02
SORBS3-215	ENST00000522721	TSPY8	P0CW00	308 aa		27.64	■■■□□ 2.02
SORBS3-215	ENST00000522721	TFAP4	Q01664	338 aa		27.64	■■■□□ 2.02
SORBS3-215	ENST00000522721	TMEM132B	Q14DG7	1078 aa		27.64	■■■□□ 2.02
SORBS3-215	ENST00000522721	WDR78	Q5VTH9	848 aa		27.64	■■■□□ 2.02
SORBS3-215	ENST00000522721	DEFB118	Q96PH6	123 aa		27.64	■■■□□ 2.02
SORBS3-215	ENST00000522721	NUP88	Q99567	741 aa	Predicted RBP	27.64	■■■□□ 2.02
SORBS3-215	ENST00000522721	CWC22	Q9HCG8	908 aa	Known RBP	27.64	■■■□□ 2.02
SORBS3-215	ENST00000522721	INCENP	Q9NQS7	918 aa		27.64	■■■□□ 2.02
SORBS3-215	ENST00000522721	TTLL1	O95922	423 aa		27.63	■■■□□ 2.01
SORBS3-215	ENST00000522721	ZKSCAN1	P17029	563 aa	Predicted RBP	27.63	■■■□□ 2.01
SORBS3-215	ENST00000522721	ERCC3	P19447	782 aa		27.63	■■■□□ 2.01
SORBS3-215	ENST00000522721	REPS2	Q8NFH8	660 aa		27.63	■■■□□ 2.01
SORBS3-215	ENST00000522721	CAPN2	P17655	700 aa		27.62	■■■□□ 2.01
SORBS3-215	ENST00000522721	IVNS1ABP	Q9Y6Y0	642 aa		27.62	■■■□□ 2.01
SORBS3-215	ENST00000522721	ZNF236	Q9UL36	1845 aa		27.62	■■■□□ 2.01
SORBS3-215	ENST00000522721	VWA5A	O00534	786 aa		27.61	■■■□□ 2.01
SORBS3-215	ENST00000522721	ORC4	O43929	436 aa		27.61	■■■□□ 2.01
SORBS3-215	ENST00000522721	RAD21	O60216	631 aa		27.61	■■■□□ 2.01
SORBS3-215	ENST00000522721	IGHA2	P01877	340 aa		27.61	■■■□□ 2.01
SORBS3-215	ENST00000522721	PRKAR2A	P13861	404 aa	Known RBP	27.61	■■■□□ 2.01
SORBS3-215	ENST00000522721	GMCL1P1	Q8NEA9	526 aa		27.61	■■■□□ 2.01
SORBS3-215	ENST00000522721	HMX1	Q9NP08	348 aa	Predicted RBP	27.61	■■■□□ 2.01
SORBS3-215	ENST00000522721	FLRT1	Q9NZU1	646 aa		27.61	■■■□□ 2.01
SORBS3-215	ENST00000522721	CACNB2	Q08289	660 aa	Predicted RBP	27.6	■■■□□ 2.01
SORBS3-215	ENST00000522721	SAMD1	Q6SPF0	538 aa	Predicted RBP	27.6	■■■□□ 2.01
SORBS3-215	ENST00000522721	LRRC47	Q8N1G4	583 aa	Known RBP	27.6	■■■□□ 2.01
SORBS3-215	ENST00000522721	NPLOC4	Q8TAT6	608 aa		27.6	■■■□□ 2.01
SORBS3-215	ENST00000522721	ZNF214	Q9UL59	606 aa	Predicted RBP	27.6	■■■□□ 2.01
SORBS3-215	ENST00000522721	MYH4	Q9Y623	1939 aa		27.59	■■■□□ 2.01
SORBS3-215	ENST00000522721	STRN	O43815	780 aa		27.59	■■■□□ 2.01
SORBS3-215	ENST00000522721	NOV	P48745	357 aa		27.59	■■■□□ 2.01
SORBS3-215	ENST00000522721	SLF1	Q9BQI6	1058 aa		27.59	■■■□□ 2.01
SORBS3-215	ENST00000522721	MROH8	Q9H579	483 aa		27.59	■■■□□ 2.01
SORBS3-215	ENST00000522721	IL17RB	Q9NRM6	502 aa		27.59	■■■□□ 2.01
SORBS3-215	ENST00000522721	FARP2	O94887	1054 aa	Predicted RBP	27.58	■■■□□ 2.01
SORBS3-215	ENST00000522721	GSPT1	P15170	499 aa	Known RBP	27.58	■■■□□ 2.01
SORBS3-215	ENST00000522721	ADORA2A	P29274	412 aa		27.58	■■■□□ 2.01
SORBS3-215	ENST00000522721	PLS1	Q14651	629 aa		27.58	■■■□□ 2.01
SORBS3-215	ENST00000522721	RIOX2	Q8IUF8	465 aa		27.58	■■■□□ 2.01
SORBS3-215	ENST00000522721	NBPF3	Q9H094	633 aa		27.58	■■■□□ 2.01
SORBS3-215	ENST00000522721	TSPY2	A6NKD2	308 aa		27.57	■■■□□ 2
SORBS3-215	ENST00000522721	SLC25A27	O95847	323 aa		27.57	■■■□□ 2
SORBS3-215	ENST00000522721	TFRC	P02786	760 aa	Known RBP	27.57	■■■□□ 2
SORBS3-215	ENST00000522721	NCAPG2	Q86XI2	1143 aa		27.57	■■■□□ 2
SORBS3-215	ENST00000522721	ABRA	Q8N0Z2	381 aa		27.57	■■■□□ 2
SORBS3-215	ENST00000522721	COL11A1	P12107	1806 aa	Predicted RBP	27.57	■■■□□ 2
SORBS3-215	ENST00000522721	HIP1	O00291	1037 aa		27.56	■■■□□ 2
SORBS3-215	ENST00000522721	NMT2	O60551	498 aa		27.56	■■■□□ 2
SORBS3-215	ENST00000522721	COBL	O75128	1261 aa		27.56	■■■□□ 2
SORBS3-215	ENST00000522721	MFAP1	P55081	439 aa	Known RBP	27.56	■■■□□ 2
SORBS3-215	ENST00000522721	TTC22	Q5TAA0	569 aa		27.56	■■■□□ 2
SORBS3-215	ENST00000522721	CWC27	Q6UX04	472 aa	Known RBP	27.56	■■■□□ 2
SORBS3-215	ENST00000522721	DIAPH3	Q9NSV4	1193 aa		27.56	■■■□□ 2
SORBS3-215	ENST00000522721	CCND3	P30281	292 aa	Predicted RBP	27.55	■■■□□ 2
SORBS3-215	ENST00000522721	STAT3	P40763	770 aa		27.55	■■■□□ 2
SORBS3-215	ENST00000522721	PPP4R3B	Q5MIZ7	849 aa		27.55	■■■□□ 2
SORBS3-215	ENST00000522721	SLFN13	Q68D06	897 aa		27.55	■■■□□ 2
SORBS3-215	ENST00000522721	PRPF38A	Q8NAV1	312 aa	Known RBP	27.55	■■■□□ 2
SORBS3-215	ENST00000522721	RANBP6	O60518	1105 aa	Known RBP	27.54	■■■□□ 2
SORBS3-215	ENST00000522721	MNX1	P50219	401 aa	Predicted RBP	27.54	■■■□□ 2
SORBS3-215	ENST00000522721	HAND2	P61296	217 aa		27.54	■■■□□ 2
SORBS3-215	ENST00000522721	TBC1D10C	Q8IV04	446 aa		27.54	■■■□□ 2
SORBS3-215	ENST00000522721	GMCL1	Q96IK5	515 aa		27.54	■■■□□ 2
SORBS3-215	ENST00000522721	FEM1B	Q9UK73	627 aa		27.54	■■■□□ 2
SORBS3-215	ENST00000522721	OGDHL	Q9ULD0	1010 aa		27.54	■■■□□ 2
SORBS3-215	ENST00000522721	ATP2A1	O14983	1001 aa		27.53	■■■□□ 2
SORBS3-215	ENST00000522721	MFSD14C	Q5VZR4	134 aa		27.53	■■■□□ 2
SORBS3-215	ENST00000522721	OLFML2B	Q68BL8	750 aa		27.53	■■■□□ 2
SORBS3-215	ENST00000522721	ANKLE1	Q8NAG6	615 aa		27.53	■■■□□ 2
SORBS3-215	ENST00000522721	STAG1	Q8WVM7	1258 aa		27.53	■■■□□ 2
SORBS3-215	ENST00000522721	IL25	Q9H293	177 aa		27.53	■■■□□ 2
SORBS3-215	ENST00000522721	STX8	Q9UNK0	236 aa		27.53	■■■□□ 2
SORBS3-215	ENST00000522721	BMP3	P12645	472 aa		27.52	■■■□□ 2
SORBS3-215	ENST00000522721	COPB2	P35606	906 aa		27.52	■■■□□ 2
SORBS3-215	ENST00000522721	LHX8	Q68G74	356 aa		27.52	■■■□□ 2
SORBS3-215	ENST00000522721	DPP9	Q86TI2	863 aa		27.52	■■■□□ 2
SORBS3-215	ENST00000522721	SLC38A10	Q9HBR0	1119 aa		27.52	■■■□□ 2
SORBS3-215	ENST00000522721	PC	P11498	1178 aa	Known RBP	27.51	■■□□□ 1.99
SORBS3-215	ENST00000522721	FCER1A	P12319	257 aa		27.51	■■□□□ 1.99
SORBS3-215	ENST00000522721	CYP2C19	P33261	490 aa		27.51	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms