RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 COPRSQ9NQ92 184 aa9.95□□□□□ -0.82
PVT1-213ENST00000522414 TMOD2Q9NZR1 351 aa9.95□□□□□ -0.82
PVT1-213ENST00000522414 PTPN22Q9Y2R2 807 aa9.95□□□□□ -0.82
PVT1-213ENST00000522414 DAGLAQ9Y4D2 1042 aa9.95□□□□□ -0.82
PVT1-213ENST00000522414 GPSM3Q9Y4H4 160 aa9.95□□□□□ -0.82
PVT1-213ENST00000522414 SNCAIPQ9Y6H5 919 aa9.95□□□□□ -0.82
PVT1-213ENST00000522414 ESPNB1AK53 854 aa9.94□□□□□ -0.82
PVT1-213ENST00000522414 SRGAP3O43295 1099 aa9.94□□□□□ -0.82
PVT1-213ENST00000522414 LDHBP07195 334 aaKnown RBP9.94□□□□□ -0.82
PVT1-213ENST00000522414 BCRP11274 1271 aa9.94□□□□□ -0.82
PVT1-213ENST00000522414 TFCP2Q12800 502 aa9.94□□□□□ -0.82
PVT1-213ENST00000522414 ERO1BQ86YB8 467 aa9.94□□□□□ -0.82
PVT1-213ENST00000522414 FAM151AQ8WW52 585 aa9.94□□□□□ -0.82
PVT1-213ENST00000522414 FRAT1Q92837 279 aaPredicted RBP9.94□□□□□ -0.82
PVT1-213ENST00000522414 ERO1AQ96HE7 468 aa9.94□□□□□ -0.82
PVT1-213ENST00000522414 ZFYVE28Q9HCC9 887 aa9.94□□□□□ -0.82
PVT1-213ENST00000522414 GNL3LQ9NVN8 582 aaKnown RBP9.94□□□□□ -0.82
PVT1-213ENST00000522414 KIAA0100Q14667 2235 aaKnown RBP9.94□□□□□ -0.82
PVT1-213ENST00000522414 MYH13Q9UKX3 1938 aa9.94□□□□□ -0.82
PVT1-213ENST00000522414 MAST3O60307 1309 aa9.93□□□□□ -0.82
PVT1-213ENST00000522414 BTBD19C9JJ37 291 aa9.93□□□□□ -0.82
PVT1-213ENST00000522414 TAF1CQ15572 869 aaPredicted RBP9.93□□□□□ -0.82
PVT1-213ENST00000522414 BEND7Q8N7W2 519 aaPredicted RBP9.93□□□□□ -0.82
PVT1-213ENST00000522414 ARHGAP45Q92619 1136 aa9.93□□□□□ -0.82
PVT1-213ENST00000522414 CLUAP1Q96AJ1 413 aa9.93□□□□□ -0.82
PVT1-213ENST00000522414 XAGE2Q96GT9 111 aa9.93□□□□□ -0.82
PVT1-213ENST00000522414 NEUROD6Q96NK8 337 aa9.93□□□□□ -0.82
PVT1-213ENST00000522414 ZNF341Q9BYN7 854 aa9.93□□□□□ -0.82
PVT1-213ENST00000522414 ABCF2Q9UG63 623 aa9.93□□□□□ -0.82
PVT1-213ENST00000522414 DENND2AQ9ULE3 1009 aa9.93□□□□□ -0.82
PVT1-213ENST00000522414 A0A1B0GUL7 405 aa9.92□□□□□ -0.82
PVT1-213ENST00000522414 MYCP01106 439 aaPredicted RBP9.92□□□□□ -0.82
PVT1-213ENST00000522414 CETPP11597 493 aa9.92□□□□□ -0.82
PVT1-213ENST00000522414 TRIM27P14373 513 aa9.92□□□□□ -0.82
PVT1-213ENST00000522414 EN2P19622 333 aaPredicted RBP9.92□□□□□ -0.82
PVT1-213ENST00000522414 SNAPC2Q13487 334 aa9.92□□□□□ -0.82
PVT1-213ENST00000522414 RASGRF1Q13972 1273 aa9.92□□□□□ -0.82
PVT1-213ENST00000522414 DCAF15Q66K64 600 aa9.92□□□□□ -0.82
PVT1-213ENST00000522414 TBC1D9Q6ZT07 1266 aa9.92□□□□□ -0.82
PVT1-213ENST00000522414 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.92□□□□□ -0.82
PVT1-213ENST00000522414 ARHGAP39Q9C0H5 1083 aa9.92□□□□□ -0.82
PVT1-213ENST00000522414 CYLDQ9NQC7 956 aa9.92□□□□□ -0.82
PVT1-213ENST00000522414 ZNF112Q9UJU3 913 aa9.92□□□□□ -0.82
PVT1-213ENST00000522414 HDAC5Q9UQL6 1122 aa9.92□□□□□ -0.82
PVT1-213ENST00000522414 PNMA6EA0A0J9YXQ4 647 aa9.91□□□□□ -0.82
PVT1-213ENST00000522414 IPO8O15397 1037 aaKnown RBP9.91□□□□□ -0.82
PVT1-213ENST00000522414 GNAI3P08754 354 aa9.91□□□□□ -0.82
PVT1-213ENST00000522414 RGS3P49796 1198 aa9.91□□□□□ -0.82
PVT1-213ENST00000522414 PPATQ06203 517 aa9.91□□□□□ -0.82
PVT1-213ENST00000522414 PPIL2Q13356 520 aa9.91□□□□□ -0.82
PVT1-213ENST00000522414 RIPOR1Q6ZS17 1223 aa9.91□□□□□ -0.82
PVT1-213ENST00000522414 NEDD1Q8NHV4 660 aa9.91□□□□□ -0.82
PVT1-213ENST00000522414 GTPBP3Q969Y2 492 aaKnown RBP9.91□□□□□ -0.82
PVT1-213ENST00000522414 HOOK2Q96ED9 719 aa9.91□□□□□ -0.82
PVT1-213ENST00000522414 GMCL1Q96IK5 515 aa9.91□□□□□ -0.82
PVT1-213ENST00000522414 CPA4Q9UI42 421 aa9.91□□□□□ -0.82
PVT1-213ENST00000522414 SALL1Q9NSC2 1324 aa9.9□□□□□ -0.82
PVT1-213ENST00000522414 DDTLA6NHG4 134 aaPredicted RBP9.9□□□□□ -0.82
PVT1-213ENST00000522414 TLR2O60603 784 aa9.9□□□□□ -0.82
PVT1-213ENST00000522414 GNAI2P04899 355 aa9.9□□□□□ -0.82
PVT1-213ENST00000522414 MECOMQ03112 1051 aa9.9□□□□□ -0.82
PVT1-213ENST00000522414 MOGSQ13724 837 aa9.9□□□□□ -0.82
PVT1-213ENST00000522414 PI16Q6UXB8 463 aa9.9□□□□□ -0.82
PVT1-213ENST00000522414 ATF7IPQ6VMQ6 1270 aa9.9□□□□□ -0.82
PVT1-213ENST00000522414 PROCA1Q8NCQ7 364 aaPredicted RBP9.9□□□□□ -0.82
PVT1-213ENST00000522414 ZNF384Q8TF68 577 aa9.9□□□□□ -0.82
PVT1-213ENST00000522414 HMG20BQ9P0W2 317 aa9.9□□□□□ -0.82
PVT1-213ENST00000522414 PTCH2Q9Y6C5 1203 aa9.9□□□□□ -0.82
PVT1-213ENST00000522414 RPAP1Q9BWH6 1393 aaPredicted RBP9.89□□□□□ -0.83
PVT1-213ENST00000522414 PDHXO00330 501 aa9.89□□□□□ -0.83
PVT1-213ENST00000522414 WDHD1O75717 1129 aaPredicted RBP9.89□□□□□ -0.83
PVT1-213ENST00000522414 CTGFP29279 349 aa9.89□□□□□ -0.83
PVT1-213ENST00000522414 G3BP1Q13283 466 aaKnown RBP eCLIP9.89□□□□□ -0.83
PVT1-213ENST00000522414 PICALMQ13492 652 aa9.89□□□□□ -0.83
PVT1-213ENST00000522414 MTX1Q13505 466 aa9.89□□□□□ -0.83
PVT1-213ENST00000522414 GORABQ5T7V8 394 aa9.89□□□□□ -0.83
PVT1-213ENST00000522414 C17orf99Q6UX52 265 aa9.89□□□□□ -0.83
PVT1-213ENST00000522414 DZIP1Q86YF9 867 aaKnown RBP9.89□□□□□ -0.83
PVT1-213ENST00000522414 ZSCAN29Q8IWY8 852 aaPredicted RBP9.89□□□□□ -0.83
PVT1-213ENST00000522414 TMEM57Q8N5G2 664 aa9.89□□□□□ -0.83
PVT1-213ENST00000522414 SH3TC2Q8TF17 1288 aa9.89□□□□□ -0.83
PVT1-213ENST00000522414 ARMC5Q96C12 935 aa9.89□□□□□ -0.83
PVT1-213ENST00000522414 IDI2Q9BXS1 227 aa9.89□□□□□ -0.83
PVT1-213ENST00000522414 KRTAP4-8Q9BYQ9 185 aa9.89□□□□□ -0.83
PVT1-213ENST00000522414 SLC24A3Q9HC58 644 aa9.89□□□□□ -0.83
PVT1-213ENST00000522414 HMX1Q9NP08 348 aaPredicted RBP9.89□□□□□ -0.83
PVT1-213ENST00000522414 DDX4Q9NQI0 724 aaKnown RBP9.89□□□□□ -0.83
PVT1-213ENST00000522414 AKAP2Q9Y2D5 859 aa9.89□□□□□ -0.83
PVT1-213ENST00000522414 ZHX2Q9Y6X8 837 aa9.89□□□□□ -0.83
PVT1-213ENST00000522414 AK9Q5TCS8 1911 aa9.89□□□□□ -0.83
PVT1-213ENST00000522414 GAKO14976 1311 aa9.88□□□□□ -0.83
PVT1-213ENST00000522414 ENTPD3O75355 529 aa9.88□□□□□ -0.83
PVT1-213ENST00000522414 CYP2C8P10632 490 aa9.88□□□□□ -0.83
PVT1-213ENST00000522414 BTDP43251 543 aa9.88□□□□□ -0.83
PVT1-213ENST00000522414 LACTBP83111 547 aaPredicted RBP9.88□□□□□ -0.83
PVT1-213ENST00000522414 MVPQ14764 893 aaKnown RBP9.88□□□□□ -0.83
PVT1-213ENST00000522414 ARHGEF6Q15052 776 aa9.88□□□□□ -0.83
PVT1-213ENST00000522414 SPTY2D1Q68D10 685 aaPredicted RBP9.88□□□□□ -0.83
PVT1-213ENST00000522414 ERICH6Q7L0X2 663 aa9.88□□□□□ -0.83
PVT1-213ENST00000522414 ZGPATQ8N5A5 531 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms