RNA–Protein interactions for RNA: ENST00000522328.1

SH2D4A-205, Transcript of SH2 domain containing 4A, humanhuman

TSL 2

Gene SH2D4A, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-205ENST00000522328 USP17L19D6RCP7 530 aa8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 USP17L20D6RJB6 530 aa8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 KDM4AO75164 1064 aa8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 IDH1O75874 414 aaKnown RBP8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 GDF11O95390 407 aa8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 CYP2B6P20813 491 aa8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 USP5P45974 858 aa8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 GCGRP47871 477 aa8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 USP17L24Q0WX57 530 aa8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 HSP90AB4PQ58FF6 505 aa8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 TATDN1Q6P1N9 297 aa8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 PLEKHH3Q7Z736 793 aa8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 CCDC82Q8N4S0 544 aa8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 DIS3LQ8TF46 1054 aaKnown RBP8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 USP6NLQ92738 828 aa8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 FEZ1Q99689 392 aa8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 APBA2Q99767 749 aa8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 GDF15Q99988 308 aa8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 C11orf49Q9H6J7 331 aa8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 CWC22Q9HCG8 908 aaKnown RBP8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 TXNRD2Q9NNW7 524 aa8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 RBPJLQ9UBG7 517 aa8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 RABGAP1Q9Y3P9 1069 aa8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 DNAH12Q6ZR08 3092 aa8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 GH2P01242 217 aa8.3□□□□□ -1.08
SH2D4A-205ENST00000522328 PSEN2P49810 448 aa8.3□□□□□ -1.08
SH2D4A-205ENST00000522328 DYNLL1P63167 89 aaKnown RBP8.3□□□□□ -1.08
SH2D4A-205ENST00000522328 JAG1P78504 1218 aa8.3□□□□□ -1.08
SH2D4A-205ENST00000522328 TRIM32Q13049 653 aa8.3□□□□□ -1.08
SH2D4A-205ENST00000522328 TTF1Q15361 905 aaPredicted RBP8.3□□□□□ -1.08
SH2D4A-205ENST00000522328 CSPP1Q1MSJ5 1256 aa8.3□□□□□ -1.08
SH2D4A-205ENST00000522328 MORN1Q5T089 497 aa8.3□□□□□ -1.08
SH2D4A-205ENST00000522328 POTEEQ6S8J3 1075 aa8.3□□□□□ -1.08
SH2D4A-205ENST00000522328 LBX2Q6XYB7 198 aa8.3□□□□□ -1.08
SH2D4A-205ENST00000522328 GPR142Q7Z601 462 aa8.3□□□□□ -1.08
SH2D4A-205ENST00000522328 ITPRIPQ8IWB1 547 aa8.3□□□□□ -1.08
SH2D4A-205ENST00000522328 C7orf61Q8IZ16 206 aa8.3□□□□□ -1.08
SH2D4A-205ENST00000522328 MAGEB6Q8N7X4 407 aa8.3□□□□□ -1.08
SH2D4A-205ENST00000522328 EAF2Q96CJ1 260 aaPredicted RBP8.3□□□□□ -1.08
SH2D4A-205ENST00000522328 PAGR1Q9BTK6 254 aa8.3□□□□□ -1.08
SH2D4A-205ENST00000522328 SLC4A5Q9BY07 1137 aa8.3□□□□□ -1.08
SH2D4A-205ENST00000522328 KIAA1683Q9H0B3 1180 aa8.3□□□□□ -1.08
SH2D4A-205ENST00000522328 CCDC8Q9H0W5 538 aaPredicted RBP8.3□□□□□ -1.08
SH2D4A-205ENST00000522328 CABP5Q9NP86 173 aa8.3□□□□□ -1.08
SH2D4A-205ENST00000522328 TLR7Q9NYK1 1049 aaKnown RBP8.3□□□□□ -1.08
SH2D4A-205ENST00000522328 STAP2Q9UGK3 403 aa8.3□□□□□ -1.08
SH2D4A-205ENST00000522328 SAP30BPQ9UHR5 308 aaKnown RBP8.3□□□□□ -1.08
SH2D4A-205ENST00000522328 CDK5RAP2Q96SN8 1893 aa8.3□□□□□ -1.08
SH2D4A-205ENST00000522328 PLXNB2O15031 1838 aa8.29□□□□□ -1.08
SH2D4A-205ENST00000522328 HOXA2O43364 376 aa8.29□□□□□ -1.08
SH2D4A-205ENST00000522328 MSCO60682 206 aa8.29□□□□□ -1.08
SH2D4A-205ENST00000522328 USP46P62068 366 aa8.29□□□□□ -1.08
SH2D4A-205ENST00000522328 CACNB2Q08289 660 aaPredicted RBP8.29□□□□□ -1.08
SH2D4A-205ENST00000522328 ABCB5Q2M3G0 1257 aa8.29□□□□□ -1.08
SH2D4A-205ENST00000522328 CERKLQ49MI3 558 aaPredicted RBP8.29□□□□□ -1.08
SH2D4A-205ENST00000522328 MFSD14CQ5VZR4 134 aa8.29□□□□□ -1.08
SH2D4A-205ENST00000522328 CEP85Q6P2H3 762 aa8.29□□□□□ -1.08
SH2D4A-205ENST00000522328 CATSPERGQ6ZRH7 1159 aa8.29□□□□□ -1.08
SH2D4A-205ENST00000522328 MIGA1Q8NAN2 632 aa8.29□□□□□ -1.08
SH2D4A-205ENST00000522328 PORCNQ9H237 461 aa8.29□□□□□ -1.08
SH2D4A-205ENST00000522328 RABGEF1Q9UJ41 708 aa8.29□□□□□ -1.08
SH2D4A-205ENST00000522328 IVNS1ABPQ9Y6Y0 642 aa8.29□□□□□ -1.08
SH2D4A-205ENST00000522328 DDX60LQ5H9U9 1706 aaKnown RBP8.29□□□□□ -1.08
SH2D4A-205ENST00000522328 MAGEB6P1A0A0J9YX57 407 aa8.28□□□□□ -1.08
SH2D4A-205ENST00000522328 SLC15A5A6NIM6 579 aa8.28□□□□□ -1.08
SH2D4A-205ENST00000522328 ARHGAP33O14559 1287 aa8.28□□□□□ -1.08
SH2D4A-205ENST00000522328 HOXC6P09630 235 aa8.28□□□□□ -1.08
SH2D4A-205ENST00000522328 COL6A1P12109 1028 aa8.28□□□□□ -1.08
SH2D4A-205ENST00000522328 VCAM1P19320 739 aa8.28□□□□□ -1.08
SH2D4A-205ENST00000522328 RAB3GAP1Q15042 981 aa8.28□□□□□ -1.08
SH2D4A-205ENST00000522328 SHROOM1Q2M3G4 852 aaPredicted RBP8.28□□□□□ -1.08
SH2D4A-205ENST00000522328 Q3C1V9 767 aa8.28□□□□□ -1.08
SH2D4A-205ENST00000522328 LRIT3Q3SXY7 679 aa8.28□□□□□ -1.08
SH2D4A-205ENST00000522328 SWT1Q5T5J6 900 aaKnown RBP8.28□□□□□ -1.08
SH2D4A-205ENST00000522328 AACSQ86V21 672 aa8.28□□□□□ -1.08
SH2D4A-205ENST00000522328 TDHQ8IZJ6 230 aa8.28□□□□□ -1.08
SH2D4A-205ENST00000522328 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.28□□□□□ -1.08
SH2D4A-205ENST00000522328 EDC3Q96F86 508 aaKnown RBP8.28□□□□□ -1.08
SH2D4A-205ENST00000522328 RIOK1Q9BRS2 568 aaKnown RBP8.28□□□□□ -1.08
SH2D4A-205ENST00000522328 CRNKL1Q9BZJ0 848 aaKnown RBP8.28□□□□□ -1.08
SH2D4A-205ENST00000522328 ZMYND8Q9ULU4 1186 aaPredicted RBP8.28□□□□□ -1.08
SH2D4A-205ENST00000522328 LAMA2P24043 3122 aaKnown RBP8.28□□□□□ -1.08
SH2D4A-205ENST00000522328 PFASO15067 1338 aa8.28□□□□□ -1.08
SH2D4A-205ENST00000522328 MYH1P12882 1939 aa8.27□□□□□ -1.09
SH2D4A-205ENST00000522328 ALPK3Q96L96 1907 aa8.27□□□□□ -1.09
SH2D4A-205ENST00000522328 SOX1O00570 391 aaPredicted RBP8.27□□□□□ -1.09
SH2D4A-205ENST00000522328 STRNO43815 780 aa8.27□□□□□ -1.09
SH2D4A-205ENST00000522328 CNMDO75829 334 aa8.27□□□□□ -1.09
SH2D4A-205ENST00000522328 POLR3DP05423 398 aaPredicted RBP8.27□□□□□ -1.09
SH2D4A-205ENST00000522328 RLBP1P12271 317 aa8.27□□□□□ -1.09
SH2D4A-205ENST00000522328 SHMT1P34896 483 aa8.27□□□□□ -1.09
SH2D4A-205ENST00000522328 MAGEA10P43363 369 aaPredicted RBP8.27□□□□□ -1.09
SH2D4A-205ENST00000522328 HNRNPUQ00839 825 aaKnown RBP eCLIP8.27□□□□□ -1.09
SH2D4A-205ENST00000522328 GABPAQ06546 454 aa8.27□□□□□ -1.09
SH2D4A-205ENST00000522328 GRB14Q14449 540 aa8.27□□□□□ -1.09
SH2D4A-205ENST00000522328 ZYXQ15942 572 aaKnown RBP8.27□□□□□ -1.09
SH2D4A-205ENST00000522328 CCL14Q16627 93 aa8.27□□□□□ -1.09
SH2D4A-205ENST00000522328 LHX8Q68G74 356 aa8.27□□□□□ -1.09
SH2D4A-205ENST00000522328 CLASRPQ8N2M8 674 aaKnown RBP8.27□□□□□ -1.09
SH2D4A-205ENST00000522328 KIF1BPQ96EK5 621 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms