RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 TRAPPC3LQ5T215 181 aa15.36■□□□□ 0.05
SYNPO-205ENST00000522122 SEL1L2Q5TEA6 688 aa15.36■□□□□ 0.05
SYNPO-205ENST00000522122 CEP57Q86XR8 500 aa15.36■□□□□ 0.05
SYNPO-205ENST00000522122 SAMD15Q9P1V8 674 aa15.36■□□□□ 0.05
SYNPO-205ENST00000522122 FMNL1O95466 1100 aaPredicted RBP15.36■□□□□ 0.05
SYNPO-205ENST00000522122 RPGRIP1Q96KN7 1286 aa15.36■□□□□ 0.05
SYNPO-205ENST00000522122 DIP2AQ14689 1571 aa15.36■□□□□ 0.05
SYNPO-205ENST00000522122 HPDP32754 393 aaPredicted RBP15.36■□□□□ 0.05
SYNPO-205ENST00000522122 ADCY7P51828 1080 aa15.36■□□□□ 0.05
SYNPO-205ENST00000522122 UBE3CQ15386 1083 aa15.36■□□□□ 0.05
SYNPO-205ENST00000522122 FAM47AQ5JRC9 791 aa15.36■□□□□ 0.05
SYNPO-205ENST00000522122 MPHOSPH6Q99547 160 aaKnown RBP15.36■□□□□ 0.05
SYNPO-205ENST00000522122 PCDHA5Q9Y5H7 936 aa15.36■□□□□ 0.05
SYNPO-205ENST00000522122 SAR1BQ9Y6B6 198 aa15.36■□□□□ 0.05
SYNPO-205ENST00000522122 PALLDQ8WX93 1383 aa15.35■□□□□ 0.05
SYNPO-205ENST00000522122 IQCB1Q15051 598 aa15.35■□□□□ 0.05
SYNPO-205ENST00000522122 CCDC6Q16204 474 aa15.35■□□□□ 0.05
SYNPO-205ENST00000522122 OSBP2Q969R2 916 aa15.35■□□□□ 0.05
SYNPO-205ENST00000522122 PSMB7Q99436 277 aa15.35■□□□□ 0.05
SYNPO-205ENST00000522122 VEZTQ9HBM0 779 aa15.35■□□□□ 0.05
SYNPO-205ENST00000522122 ZBTB21Q9ULJ3 1066 aa15.35■□□□□ 0.05
SYNPO-205ENST00000522122 SH2B2O14492 632 aaPredicted RBP15.35■□□□□ 0.05
SYNPO-205ENST00000522122 LRRC45Q96CN5 670 aa15.35■□□□□ 0.05
SYNPO-205ENST00000522122 CALCRLQ16602 461 aa15.35■□□□□ 0.05
SYNPO-205ENST00000522122 SPATA1Q5VX52 437 aa15.35■□□□□ 0.05
SYNPO-205ENST00000522122 REXO1Q8N1G1 1221 aaKnown RBP15.35■□□□□ 0.05
SYNPO-205ENST00000522122 IQCDQ96DY2 449 aa15.35■□□□□ 0.05
SYNPO-205ENST00000522122 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.35■□□□□ 0.05
SYNPO-205ENST00000522122 KCNK9Q9NPC2 374 aa15.35■□□□□ 0.05
SYNPO-205ENST00000522122 DIP2BQ9P265 1576 aa15.35■□□□□ 0.05
SYNPO-205ENST00000522122 TNKSO95271 1327 aa15.35■□□□□ 0.05
SYNPO-205ENST00000522122 WDR19Q8NEZ3 1342 aa15.35■□□□□ 0.05
SYNPO-205ENST00000522122 ACTN4O43707 911 aaKnown RBP15.35■□□□□ 0.05
SYNPO-205ENST00000522122 TOM1O60784 492 aa15.35■□□□□ 0.05
SYNPO-205ENST00000522122 ERCC3P19447 782 aa15.35■□□□□ 0.05
SYNPO-205ENST00000522122 ADORA1P30542 326 aa15.35■□□□□ 0.05
SYNPO-205ENST00000522122 ZBTB16Q05516 673 aa15.35■□□□□ 0.05
SYNPO-205ENST00000522122 KMT5BQ4FZB7 885 aa15.35■□□□□ 0.05
SYNPO-205ENST00000522122 NBPF14Q5TI25 921 aa15.35■□□□□ 0.05
SYNPO-205ENST00000522122 ERCC5P28715 1186 aaPredicted RBP15.34■□□□□ 0.05
SYNPO-205ENST00000522122 KLHL30Q0D2K2 578 aa15.34■□□□□ 0.05
SYNPO-205ENST00000522122 APOA5Q6Q788 366 aa15.34■□□□□ 0.05
SYNPO-205ENST00000522122 IFIH1Q9BYX4 1025 aaKnown RBP15.34■□□□□ 0.05
SYNPO-205ENST00000522122 FAM207AQ9NSI2 230 aaPredicted RBP15.34■□□□□ 0.05
SYNPO-205ENST00000522122 CEMIPQ8WUJ3 1361 aa15.34■□□□□ 0.05
SYNPO-205ENST00000522122 SPOPO43791 374 aa15.34■□□□□ 0.05
SYNPO-205ENST00000522122 SEC31AO94979 1220 aaKnown RBP15.34■□□□□ 0.05
SYNPO-205ENST00000522122 CFAP221Q4G0U5 840 aa15.34■□□□□ 0.05
SYNPO-205ENST00000522122 SND1Q7KZF4 910 aaKnown RBP eCLIP15.34■□□□□ 0.05
SYNPO-205ENST00000522122 RBM17Q96I25 401 aaKnown RBP15.34■□□□□ 0.05
SYNPO-205ENST00000522122 ZSCAN10Q96SZ4 725 aaPredicted RBP15.34■□□□□ 0.05
SYNPO-205ENST00000522122 PUS3Q9BZE2 481 aaKnown RBP15.34■□□□□ 0.05
SYNPO-205ENST00000522122 FOXP1Q9H334 677 aaPredicted RBP15.34■□□□□ 0.05
SYNPO-205ENST00000522122 MAN1B1Q9UKM7 699 aa15.34■□□□□ 0.05
SYNPO-205ENST00000522122 KCNJ18B7U540 433 aa15.34■□□□□ 0.05
SYNPO-205ENST00000522122 CALUO43852 315 aaPredicted RBP15.34■□□□□ 0.05
SYNPO-205ENST00000522122 KCNJ12Q14500 433 aa15.34■□□□□ 0.05
SYNPO-205ENST00000522122 RESP18Q5W5W9 173 aa15.34■□□□□ 0.05
SYNPO-205ENST00000522122 NUCKS1Q9H1E3 243 aaKnown RBP15.34■□□□□ 0.05
SYNPO-205ENST00000522122 TSKSQ9UJT2 592 aa15.34■□□□□ 0.05
SYNPO-205ENST00000522122 GGA1Q9UJY5 639 aa15.34■□□□□ 0.05
SYNPO-205ENST00000522122 CCZ1BP86790 482 aa15.34■□□□□ 0.05
SYNPO-205ENST00000522122 CCZ1P86791 482 aaPredicted RBP15.34■□□□□ 0.05
SYNPO-205ENST00000522122 ZSCAN26Q16670 478 aa15.34■□□□□ 0.05
SYNPO-205ENST00000522122 DDX17Q92841 729 aaKnown RBP15.34■□□□□ 0.05
SYNPO-205ENST00000522122 ARPP21Q9UBL0 812 aaPredicted RBP15.34■□□□□ 0.05
SYNPO-205ENST00000522122 CEP104O60308 925 aa15.33■□□□□ 0.05
SYNPO-205ENST00000522122 GOLGA8FQ08AF8 430 aa15.33■□□□□ 0.05
SYNPO-205ENST00000522122 GOLGA8DPQ0D2H9 430 aa15.33■□□□□ 0.05
SYNPO-205ENST00000522122 PPFIA1Q13136 1202 aa15.33■□□□□ 0.05
SYNPO-205ENST00000522122 PAK2Q13177 524 aa15.33■□□□□ 0.05
SYNPO-205ENST00000522122 SRGAP1Q7Z6B7 1085 aa15.33■□□□□ 0.05
SYNPO-205ENST00000522122 ZNF609O15014 1411 aa15.33■□□□□ 0.04
SYNPO-205ENST00000522122 RBM43Q6ZSC3 357 aaKnown RBP15.33■□□□□ 0.04
SYNPO-205ENST00000522122 RRAGAQ7L523 313 aa15.33■□□□□ 0.04
SYNPO-205ENST00000522122 MAPKAPK5Q8IW41 473 aa15.33■□□□□ 0.04
SYNPO-205ENST00000522122 BLIDQ8IZY5 108 aa15.33■□□□□ 0.04
SYNPO-205ENST00000522122 MKRN1Q9UHC7 482 aaKnown RBP15.33■□□□□ 0.04
SYNPO-205ENST00000522122 DNM2P50570 870 aa15.33■□□□□ 0.04
SYNPO-205ENST00000522122 RPS8P62241 208 aaKnown RBP15.33■□□□□ 0.04
SYNPO-205ENST00000522122 MORC3Q14149 939 aa15.33■□□□□ 0.04
SYNPO-205ENST00000522122 ERBB3P21860 1342 aa15.33■□□□□ 0.04
SYNPO-205ENST00000522122 H7C1D1 291 aa15.33■□□□□ 0.04
SYNPO-205ENST00000522122 H7C1W4 665 aa15.33■□□□□ 0.04
SYNPO-205ENST00000522122 TYW1BQ6NUM6 668 aa15.33■□□□□ 0.04
SYNPO-205ENST00000522122 RUFY4Q6ZNE9 571 aa15.33■□□□□ 0.04
SYNPO-205ENST00000522122 C2CD5Q86YS7 1000 aa15.33■□□□□ 0.04
SYNPO-205ENST00000522122 SDR42E1Q8WUS8 393 aa15.33■□□□□ 0.04
SYNPO-205ENST00000522122 TSNARE1Q96NA8 513 aa15.33■□□□□ 0.04
SYNPO-205ENST00000522122 DNM3Q9UQ16 869 aa15.33■□□□□ 0.04
SYNPO-205ENST00000522122 CEP83Q9Y592 693 aa15.33■□□□□ 0.04
SYNPO-205ENST00000522122 UTYO14607 1347 aa15.32■□□□□ 0.04
SYNPO-205ENST00000522122 FLOT1O75955 427 aa15.32■□□□□ 0.04
SYNPO-205ENST00000522122 KCNJ6P48051 423 aa15.32■□□□□ 0.04
SYNPO-205ENST00000522122 ADAMTS13Q76LX8 1427 aa15.32■□□□□ 0.04
SYNPO-205ENST00000522122 PDE8BO95263 885 aa15.32■□□□□ 0.04
SYNPO-205ENST00000522122 PNMA6AP0CW24 399 aaPredicted RBP15.32■□□□□ 0.04
SYNPO-205ENST00000522122 SLC1A4P43007 532 aa15.32■□□□□ 0.04
SYNPO-205ENST00000522122 SFMBT2Q5VUG0 894 aa15.32■□□□□ 0.04
SYNPO-205ENST00000522122 GPIHBP1Q8IV16 184 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms