RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 MOB2Q70IA6 237 aa24.81■■□□□ 1.56
R3HCC1-208ENST00000522012 ARMC9Q7Z3E5 817 aa24.81■■□□□ 1.56
R3HCC1-208ENST00000522012 AS3MTQ9HBK9 375 aa24.81■■□□□ 1.56
R3HCC1-208ENST00000522012 V9GY48 417 aaPredicted RBP24.81■■□□□ 1.56
R3HCC1-208ENST00000522012 VGLL4Q14135 290 aa24.8■■□□□ 1.56
R3HCC1-208ENST00000522012 KCTD1Q719H9 257 aa24.8■■□□□ 1.56
R3HCC1-208ENST00000522012 SPICE1Q8N0Z3 855 aa24.8■■□□□ 1.56
R3HCC1-208ENST00000522012 RNF26Q9BY78 433 aaPredicted RBP24.8■■□□□ 1.56
R3HCC1-208ENST00000522012 ZHX2Q9Y6X8 837 aa24.8■■□□□ 1.56
R3HCC1-208ENST00000522012 POLR2AP24928 1970 aaKnown RBP24.8■■□□□ 1.56
R3HCC1-208ENST00000522012 STK36Q9NRP7 1315 aa24.8■■□□□ 1.56
R3HCC1-208ENST00000522012 PRPF3O43395 683 aaKnown RBP24.79■■□□□ 1.56
R3HCC1-208ENST00000522012 STX6O43752 255 aa24.79■■□□□ 1.56
R3HCC1-208ENST00000522012 GPATCH4Q5T3I0 446 aaKnown RBP24.79■■□□□ 1.56
R3HCC1-208ENST00000522012 PIBF1Q8WXW3 757 aa24.79■■□□□ 1.56
R3HCC1-208ENST00000522012 GMCL1Q96IK5 515 aa24.79■■□□□ 1.56
R3HCC1-208ENST00000522012 UBA5Q9GZZ9 404 aa24.79■■□□□ 1.56
R3HCC1-208ENST00000522012 CPVLQ9H3G5 476 aa24.79■■□□□ 1.56
R3HCC1-208ENST00000522012 VCPKMTQ9H867 229 aa24.79■■□□□ 1.56
R3HCC1-208ENST00000522012 CNTNAP5Q8WYK1 1306 aa24.79■■□□□ 1.56
R3HCC1-208ENST00000522012 hCG_1642624A0A1W2PR95 340 aa24.78■■□□□ 1.56
R3HCC1-208ENST00000522012 UBE2Q2LH0YL09 131 aa24.78■■□□□ 1.56
R3HCC1-208ENST00000522012 TOMM70O94826 608 aa24.78■■□□□ 1.56
R3HCC1-208ENST00000522012 DEXIO95424 95 aa24.78■■□□□ 1.56
R3HCC1-208ENST00000522012 SPP2Q13103 211 aa24.78■■□□□ 1.56
R3HCC1-208ENST00000522012 CHADLQ6NUI6 762 aa24.78■■□□□ 1.56
R3HCC1-208ENST00000522012 WASF1Q92558 559 aa24.78■■□□□ 1.56
R3HCC1-208ENST00000522012 NUP88Q99567 741 aaPredicted RBP24.78■■□□□ 1.56
R3HCC1-208ENST00000522012 ALG1Q9BT22 464 aa24.78■■□□□ 1.56
R3HCC1-208ENST00000522012 WDR18Q9BV38 432 aa24.78■■□□□ 1.56
R3HCC1-208ENST00000522012 SNCAIPQ9Y6H5 919 aa24.78■■□□□ 1.56
R3HCC1-208ENST00000522012 VPS37CA5D8V6 355 aaPredicted RBP24.77■■□□□ 1.56
R3HCC1-208ENST00000522012 KIAA1755Q5JYT7 1200 aa24.77■■□□□ 1.56
R3HCC1-208ENST00000522012 FOXD4L5Q5VV16 416 aaPredicted RBP24.77■■□□□ 1.56
R3HCC1-208ENST00000522012 TTBK2Q6IQ55 1244 aa24.77■■□□□ 1.56
R3HCC1-208ENST00000522012 ANKRD13AQ8IZ07 590 aa24.77■■□□□ 1.56
R3HCC1-208ENST00000522012 ZNF280CQ8ND82 737 aa24.77■■□□□ 1.56
R3HCC1-208ENST00000522012 FOXD4L4Q8WXT5 416 aaPredicted RBP24.77■■□□□ 1.56
R3HCC1-208ENST00000522012 KIAA1683Q9H0B3 1180 aa24.77■■□□□ 1.56
R3HCC1-208ENST00000522012 VAT1LQ9HCJ6 419 aa24.77■■□□□ 1.56
R3HCC1-208ENST00000522012 USP17L10C9JJH3 530 aa24.76■■□□□ 1.55
R3HCC1-208ENST00000522012 H3BQV1 296 aa24.76■■□□□ 1.55
R3HCC1-208ENST00000522012 BMP3P12645 472 aa24.76■■□□□ 1.55
R3HCC1-208ENST00000522012 MAP3K11Q16584 847 aa24.76■■□□□ 1.55
R3HCC1-208ENST00000522012 SLC35G1Q2M3R5 365 aa24.76■■□□□ 1.55
R3HCC1-208ENST00000522012 IFFO2Q5TF58 517 aa24.76■■□□□ 1.55
R3HCC1-208ENST00000522012 AIFM3Q96NN9 605 aa24.76■■□□□ 1.55
R3HCC1-208ENST00000522012 TRIM75PA6NK02 468 aa24.76■■□□□ 1.55
R3HCC1-208ENST00000522012 CYTH3O43739 400 aa24.76■■□□□ 1.55
R3HCC1-208ENST00000522012 SMARCA1P28370 1054 aa24.76■■□□□ 1.55
R3HCC1-208ENST00000522012 MTMR2Q13614 643 aa24.76■■□□□ 1.55
R3HCC1-208ENST00000522012 C8orf76Q96K31 380 aa24.76■■□□□ 1.55
R3HCC1-208ENST00000522012 SPZ1Q9BXG8 430 aa24.76■■□□□ 1.55
R3HCC1-208ENST00000522012 ELP3Q9H9T3 547 aa24.76■■□□□ 1.55
R3HCC1-208ENST00000522012 WDR33Q9C0J8 1336 aaKnown RBP24.76■■□□□ 1.55
R3HCC1-208ENST00000522012 PDIA4P13667 645 aaKnown RBP24.75■■□□□ 1.55
R3HCC1-208ENST00000522012 SLC16A2P36021 539 aa24.75■■□□□ 1.55
R3HCC1-208ENST00000522012 APLP1P51693 650 aa24.75■■□□□ 1.55
R3HCC1-208ENST00000522012 CLMNQ96JQ2 1002 aa24.75■■□□□ 1.55
R3HCC1-208ENST00000522012 ZDHHC9Q9Y397 364 aa24.75■■□□□ 1.55
R3HCC1-208ENST00000522012 BRD1O95696 1058 aa24.74■■□□□ 1.55
R3HCC1-208ENST00000522012 USP14P54578 494 aa24.74■■□□□ 1.55
R3HCC1-208ENST00000522012 GUCY1B3Q02153 619 aa24.74■■□□□ 1.55
R3HCC1-208ENST00000522012 IKQ13123 557 aaPredicted RBP24.74■■□□□ 1.55
R3HCC1-208ENST00000522012 PKN1Q16512 942 aa24.74■■□□□ 1.55
R3HCC1-208ENST00000522012 FAM83BQ5T0W9 1011 aa24.74■■□□□ 1.55
R3HCC1-208ENST00000522012 RBM27Q9P2N5 1060 aaKnown RBP24.74■■□□□ 1.55
R3HCC1-208ENST00000522012 MTMR6Q9Y217 621 aa24.74■■□□□ 1.55
R3HCC1-208ENST00000522012 TMEM232C9JQI7 657 aa24.73■■□□□ 1.55
R3HCC1-208ENST00000522012 CELF2O95319 508 aaKnown RBP24.73■■□□□ 1.55
R3HCC1-208ENST00000522012 BACE1P56817 501 aa24.73■■□□□ 1.55
R3HCC1-208ENST00000522012 TRIM29Q14134 588 aa24.73■■□□□ 1.55
R3HCC1-208ENST00000522012 OTUD7BQ6GQQ9 843 aa24.73■■□□□ 1.55
R3HCC1-208ENST00000522012 RRP36Q96EU6 259 aaKnown RBP24.73■■□□□ 1.55
R3HCC1-208ENST00000522012 RIOX1Q9H6W3 641 aa24.73■■□□□ 1.55
R3HCC1-208ENST00000522012 GJB4Q9NTQ9 266 aa24.73■■□□□ 1.55
R3HCC1-208ENST00000522012 ZSCAN22P10073 491 aaPredicted RBP24.72■■□□□ 1.55
R3HCC1-208ENST00000522012 HOMER1Q86YM7 354 aa24.72■■□□□ 1.55
R3HCC1-208ENST00000522012 ADGRF4Q8IZF3 695 aa24.72■■□□□ 1.55
R3HCC1-208ENST00000522012 LPAR1Q92633 364 aa24.72■■□□□ 1.55
R3HCC1-208ENST00000522012 GBA2Q9HCG7 927 aaPredicted RBP24.72■■□□□ 1.55
R3HCC1-208ENST00000522012 AFG3L2Q9Y4W6 797 aa24.72■■□□□ 1.55
R3HCC1-208ENST00000522012 ITGBL1O95965 494 aaPredicted RBP24.71■■□□□ 1.55
R3HCC1-208ENST00000522012 SCG2P13521 617 aa24.71■■□□□ 1.55
R3HCC1-208ENST00000522012 DGKZQ13574 1117 aa24.71■■□□□ 1.55
R3HCC1-208ENST00000522012 PFKFB3Q16875 520 aaPredicted RBP24.71■■□□□ 1.55
R3HCC1-208ENST00000522012 LDLRAD1Q5T700 205 aa24.71■■□□□ 1.55
R3HCC1-208ENST00000522012 C2orf69Q8N8R5 385 aa24.71■■□□□ 1.55
R3HCC1-208ENST00000522012 CNKSR2Q8WXI2 1034 aa24.71■■□□□ 1.55
R3HCC1-208ENST00000522012 PIGSQ96S52 555 aa24.71■■□□□ 1.55
R3HCC1-208ENST00000522012 EMILIN3Q9NT22 766 aa24.71■■□□□ 1.55
R3HCC1-208ENST00000522012 SEC63Q9UGP8 760 aaKnown RBP24.71■■□□□ 1.55
R3HCC1-208ENST00000522012 DOCK1Q14185 1865 aa24.71■■□□□ 1.55
R3HCC1-208ENST00000522012 C19orf81C9J6K1 198 aa24.71■■□□□ 1.55
R3HCC1-208ENST00000522012 FKBP1BP68106 108 aa24.71■■□□□ 1.55
R3HCC1-208ENST00000522012 ERO1BQ86YB8 467 aa24.71■■□□□ 1.55
R3HCC1-208ENST00000522012 FBXO18Q8NFZ0 1043 aa24.71■■□□□ 1.55
R3HCC1-208ENST00000522012 OTUD5Q96G74 571 aa24.71■■□□□ 1.55
R3HCC1-208ENST00000522012 JMJD4Q9H9V9 463 aa24.71■■□□□ 1.55
R3HCC1-208ENST00000522012 MYH4Q9Y623 1939 aa24.7■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms