RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 C19orf81C9J6K1 198 aa12.86□□□□□ -0.35
MRPS28-208ENST00000521605 CNMDO75829 334 aa12.86□□□□□ -0.35
MRPS28-208ENST00000521605 ASNSP08243 561 aa12.86□□□□□ -0.35
MRPS28-208ENST00000521605 UQCRFS1P1P0C7P4 283 aa12.86□□□□□ -0.35
MRPS28-208ENST00000521605 CYBAP13498 195 aa12.86□□□□□ -0.35
MRPS28-208ENST00000521605 RAG1P15918 1043 aa12.86□□□□□ -0.35
MRPS28-208ENST00000521605 CCNA1P78396 465 aa12.86□□□□□ -0.35
MRPS28-208ENST00000521605 SNX17Q15036 470 aa12.86□□□□□ -0.35
MRPS28-208ENST00000521605 SPTY2D1Q68D10 685 aaPredicted RBP12.86□□□□□ -0.35
MRPS28-208ENST00000521605 GTF3C2Q8WUA4 911 aaPredicted RBP12.86□□□□□ -0.35
MRPS28-208ENST00000521605 XAGE2Q96GT9 111 aa12.86□□□□□ -0.35
MRPS28-208ENST00000521605 C1QTNF1Q9BXJ1 281 aa12.86□□□□□ -0.35
MRPS28-208ENST00000521605 EMILIN3Q9NT22 766 aa12.86□□□□□ -0.35
MRPS28-208ENST00000521605 PAG1Q9NWQ8 432 aa12.86□□□□□ -0.35
MRPS28-208ENST00000521605 CHMP5Q9NZZ3 219 aa12.86□□□□□ -0.35
MRPS28-208ENST00000521605 CLTBP09497 229 aa12.85□□□□□ -0.35
MRPS28-208ENST00000521605 IGFBP4P22692 258 aa12.85□□□□□ -0.35
MRPS28-208ENST00000521605 PBX2P40425 430 aa12.85□□□□□ -0.35
MRPS28-208ENST00000521605 FPGSQ05932 587 aa12.85□□□□□ -0.35
MRPS28-208ENST00000521605 CWC27Q6UX04 472 aaKnown RBP12.85□□□□□ -0.35
MRPS28-208ENST00000521605 CCDC129Q6ZRS4 1044 aa12.85□□□□□ -0.35
MRPS28-208ENST00000521605 TEX11Q8IYF3 940 aa12.85□□□□□ -0.35
MRPS28-208ENST00000521605 ZNF384Q8TF68 577 aa12.85□□□□□ -0.35
MRPS28-208ENST00000521605 TRIM34Q9BYJ4 488 aa12.85□□□□□ -0.35
MRPS28-208ENST00000521605 BCL11AQ9H165 835 aa12.85□□□□□ -0.35
MRPS28-208ENST00000521605 HERC5Q9UII4 1024 aaKnown RBP12.85□□□□□ -0.35
MRPS28-208ENST00000521605 HCN4Q9Y3Q4 1203 aa12.85□□□□□ -0.35
MRPS28-208ENST00000521605 TACC3Q9Y6A5 838 aa12.85□□□□□ -0.35
MRPS28-208ENST00000521605 PQBP1O60828 265 aaKnown RBP12.84□□□□□ -0.35
MRPS28-208ENST00000521605 MAP4K4O95819 1239 aaPredicted RBP12.84□□□□□ -0.35
MRPS28-208ENST00000521605 ARID4AP29374 1257 aaPredicted RBP12.84□□□□□ -0.35
MRPS28-208ENST00000521605 SLC4A3P48751 1232 aa12.84□□□□□ -0.35
MRPS28-208ENST00000521605 TIMM10P62072 90 aa12.84□□□□□ -0.35
MRPS28-208ENST00000521605 NMIQ13287 307 aaPredicted RBP12.84□□□□□ -0.35
MRPS28-208ENST00000521605 GRB14Q14449 540 aa12.84□□□□□ -0.35
MRPS28-208ENST00000521605 NECTIN1Q15223 517 aa12.84□□□□□ -0.35
MRPS28-208ENST00000521605 TTF1Q15361 905 aaPredicted RBP12.84□□□□□ -0.35
MRPS28-208ENST00000521605 RNF20Q5VTR2 975 aa12.84□□□□□ -0.35
MRPS28-208ENST00000521605 TMED8Q6PL24 325 aaPredicted RBP12.84□□□□□ -0.35
MRPS28-208ENST00000521605 SAMD1Q6SPF0 538 aaPredicted RBP12.84□□□□□ -0.35
MRPS28-208ENST00000521605 DPP9Q86TI2 863 aa12.84□□□□□ -0.35
MRPS28-208ENST00000521605 CRACR2BQ8N4Y2 399 aaPredicted RBP12.84□□□□□ -0.35
MRPS28-208ENST00000521605 NEUROD6Q96NK8 337 aa12.84□□□□□ -0.35
MRPS28-208ENST00000521605 IL25Q9H293 177 aa12.84□□□□□ -0.35
MRPS28-208ENST00000521605 ALDH8A1Q9H2A2 487 aaPredicted RBP12.84□□□□□ -0.35
MRPS28-208ENST00000521605 RABGAP1Q9Y3P9 1069 aa12.84□□□□□ -0.35
MRPS28-208ENST00000521605 XIRP2A4UGR9 3374 aa12.84□□□□□ -0.35
MRPS28-208ENST00000521605 SIPA1L1O43166 1804 aa12.83□□□□□ -0.35
MRPS28-208ENST00000521605 GRXCR1A8MXD5 290 aa12.83□□□□□ -0.36
MRPS28-208ENST00000521605 HOXC6P09630 235 aa12.83□□□□□ -0.36
MRPS28-208ENST00000521605 ADGRE1Q14246 886 aa12.83□□□□□ -0.36
MRPS28-208ENST00000521605 LRRC41Q15345 812 aa12.83□□□□□ -0.36
MRPS28-208ENST00000521605 MCMDC2Q4G0Z9 681 aa12.83□□□□□ -0.36
MRPS28-208ENST00000521605 FAM47AQ5JRC9 791 aa12.83□□□□□ -0.36
MRPS28-208ENST00000521605 ZMYM1Q5SVZ6 1142 aa12.83□□□□□ -0.36
MRPS28-208ENST00000521605 PRAMEF19Q5SWL8 479 aa12.83□□□□□ -0.36
MRPS28-208ENST00000521605 AKNAD1Q5T1N1 836 aa12.83□□□□□ -0.36
MRPS28-208ENST00000521605 GORABQ5T7V8 394 aa12.83□□□□□ -0.36
MRPS28-208ENST00000521605 ZSCAN25Q6NSZ9 544 aa12.83□□□□□ -0.36
MRPS28-208ENST00000521605 USP17L2Q6R6M4 530 aa12.83□□□□□ -0.36
MRPS28-208ENST00000521605 SH3RF3Q8TEJ3 882 aaPredicted RBP12.83□□□□□ -0.36
MRPS28-208ENST00000521605 INTS4Q96HW7 963 aaKnown RBP12.83□□□□□ -0.36
MRPS28-208ENST00000521605 FEZ1Q99689 392 aa12.83□□□□□ -0.36
MRPS28-208ENST00000521605 DNAJC18Q9H819 358 aa12.83□□□□□ -0.36
MRPS28-208ENST00000521605 TMEM39AQ9NV64 488 aa12.83□□□□□ -0.36
MRPS28-208ENST00000521605 RAI14Q9P0K7 980 aa12.83□□□□□ -0.36
MRPS28-208ENST00000521605 BTBD7Q9P203 1132 aa12.83□□□□□ -0.36
MRPS28-208ENST00000521605 PI4KBQ9UBF8 816 aa12.83□□□□□ -0.36
MRPS28-208ENST00000521605 ZBTB21Q9ULJ3 1066 aa12.83□□□□□ -0.36
MRPS28-208ENST00000521605 A0A0D9SFI3 127 aa12.82□□□□□ -0.36
MRPS28-208ENST00000521605 USP17L15C9J2P7 530 aa12.82□□□□□ -0.36
MRPS28-208ENST00000521605 USP17L13C9JLJ4 530 aa12.82□□□□□ -0.36
MRPS28-208ENST00000521605 USP17L11C9JVI0 530 aa12.82□□□□□ -0.36
MRPS28-208ENST00000521605 USP17L18D6R9N7 530 aa12.82□□□□□ -0.36
MRPS28-208ENST00000521605 USP17L22D6RA61 530 aa12.82□□□□□ -0.36
MRPS28-208ENST00000521605 USP17L17D6RBQ6 530 aa12.82□□□□□ -0.36
MRPS28-208ENST00000521605 USP17L19D6RCP7 530 aa12.82□□□□□ -0.36
MRPS28-208ENST00000521605 USP17L20D6RJB6 530 aa12.82□□□□□ -0.36
MRPS28-208ENST00000521605 RNF113AO15541 343 aaKnown RBP12.82□□□□□ -0.36
MRPS28-208ENST00000521605 SEPT4O43236 478 aa12.82□□□□□ -0.36
MRPS28-208ENST00000521605 PSMA5P28066 241 aa12.82□□□□□ -0.36
MRPS28-208ENST00000521605 GSTO1P78417 241 aa12.82□□□□□ -0.36
MRPS28-208ENST00000521605 USP17L24Q0WX57 530 aa12.82□□□□□ -0.36
MRPS28-208ENST00000521605 CUL4AQ13619 759 aa12.82□□□□□ -0.36
MRPS28-208ENST00000521605 KRT32Q14532 448 aa12.82□□□□□ -0.36
MRPS28-208ENST00000521605 TTC39AQ5SRH9 613 aa12.82□□□□□ -0.36
MRPS28-208ENST00000521605 MICALL1Q8N3F8 863 aa12.82□□□□□ -0.36
MRPS28-208ENST00000521605 LRFN3Q9BTN0 628 aa12.82□□□□□ -0.36
MRPS28-208ENST00000521605 DSCC1Q9BVC3 393 aa12.82□□□□□ -0.36
MRPS28-208ENST00000521605 PBX4Q9BYU1 374 aa12.82□□□□□ -0.36
MRPS28-208ENST00000521605 SNX14Q9Y5W7 946 aa12.82□□□□□ -0.36
MRPS28-208ENST00000521605 PDS5AQ29RF7 1337 aaKnown RBP12.82□□□□□ -0.36
MRPS28-208ENST00000521605 SYNGAP1Q96PV0 1343 aa12.82□□□□□ -0.36
MRPS28-208ENST00000521605 TCF20Q9UGU0 1960 aaKnown RBP12.81□□□□□ -0.36
MRPS28-208ENST00000521605 PLXNA1Q9UIW2 1896 aa12.81□□□□□ -0.36
MRPS28-208ENST00000521605 KIAA0355O15063 1070 aa12.81□□□□□ -0.36
MRPS28-208ENST00000521605 LDHCP07864 332 aa12.81□□□□□ -0.36
MRPS28-208ENST00000521605 ADORA2AP29274 412 aa12.81□□□□□ -0.36
MRPS28-208ENST00000521605 TFF2Q03403 129 aa12.81□□□□□ -0.36
MRPS28-208ENST00000521605 C1orf53Q5VUE5 145 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms