RNA–Protein interactions for RNA: ENST00000521562.5

PTK2-233, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-233	ENST00000521562	KLRC3	Q07444	240 aa		11.33	□□□□□ -0.6
PTK2-233	ENST00000521562	TICAM2	Q86XR7	235 aa		11.33	□□□□□ -0.6
PTK2-233	ENST00000521562	LRRC47	Q8N1G4	583 aa	Known RBP	11.33	□□□□□ -0.6
PTK2-233	ENST00000521562	NEDD1	Q8NHV4	660 aa		11.33	□□□□□ -0.6
PTK2-233	ENST00000521562	NKX2-3	Q8TAU0	364 aa		11.33	□□□□□ -0.6
PTK2-233	ENST00000521562	U2AF1L4	Q8WU68	220 aa	Known RBP	11.33	□□□□□ -0.6
PTK2-233	ENST00000521562	SOCS4	Q8WXH5	440 aa		11.33	□□□□□ -0.6
PTK2-233	ENST00000521562	MKL1	Q969V6	931 aa		11.33	□□□□□ -0.6
PTK2-233	ENST00000521562	SPATC1L	Q9H0A9	340 aa		11.33	□□□□□ -0.6
PTK2-233	ENST00000521562	ZNF287	Q9HBT7	754 aa		11.33	□□□□□ -0.6
PTK2-233	ENST00000521562	CWC22	Q9HCG8	908 aa	Known RBP	11.33	□□□□□ -0.6
PTK2-233	ENST00000521562	GOPC	Q9HD26	462 aa		11.33	□□□□□ -0.6
PTK2-233	ENST00000521562	PAK6	Q9NQU5	681 aa	Predicted RBP	11.33	□□□□□ -0.6
PTK2-233	ENST00000521562	FLRT1	Q9NZU1	646 aa		11.33	□□□□□ -0.6
PTK2-233	ENST00000521562	ANAPC4	Q9UJX5	808 aa		11.33	□□□□□ -0.6
PTK2-233	ENST00000521562	ADAMTS5	Q9UNA0	930 aa		11.33	□□□□□ -0.6
PTK2-233	ENST00000521562	CEP290	O15078	2479 aa		11.33	□□□□□ -0.6
PTK2-233	ENST00000521562	LAMA4	Q16363	1823 aa		11.32	□□□□□ -0.6
PTK2-233	ENST00000521562	ZNF236	Q9UL36	1845 aa		11.32	□□□□□ -0.6
PTK2-233	ENST00000521562	NMT2	O60551	498 aa		11.32	□□□□□ -0.6
PTK2-233	ENST00000521562	SGPL1	O95470	568 aa		11.32	□□□□□ -0.6
PTK2-233	ENST00000521562	SLC3A2	P08195	630 aa	Known RBP	11.32	□□□□□ -0.6
PTK2-233	ENST00000521562	XRCC5	P13010	732 aa	Known RBP	11.32	□□□□□ -0.6
PTK2-233	ENST00000521562	ERCC3	P19447	782 aa		11.32	□□□□□ -0.6
PTK2-233	ENST00000521562	RGS2	P41220	211 aa		11.32	□□□□□ -0.6
PTK2-233	ENST00000521562	HAND2	P61296	217 aa		11.32	□□□□□ -0.6
PTK2-233	ENST00000521562	MAP2K5	Q13163	448 aa		11.32	□□□□□ -0.6
PTK2-233	ENST00000521562	GRB14	Q14449	540 aa		11.32	□□□□□ -0.6
PTK2-233	ENST00000521562	PLS1	Q14651	629 aa		11.32	□□□□□ -0.6
PTK2-233	ENST00000521562	CWC27	Q6UX04	472 aa	Known RBP	11.32	□□□□□ -0.6
PTK2-233	ENST00000521562	UBE2Q1	Q7Z7E8	422 aa		11.32	□□□□□ -0.6
PTK2-233	ENST00000521562	REPS2	Q8NFH8	660 aa		11.32	□□□□□ -0.6
PTK2-233	ENST00000521562	NPLOC4	Q8TAT6	608 aa		11.32	□□□□□ -0.6
PTK2-233	ENST00000521562	CHMP4C	Q96CF2	233 aa		11.32	□□□□□ -0.6
PTK2-233	ENST00000521562	DEFB118	Q96PH6	123 aa		11.32	□□□□□ -0.6
PTK2-233	ENST00000521562	APBA2	Q99767	749 aa		11.32	□□□□□ -0.6
PTK2-233	ENST00000521562	NBPF3	Q9H094	633 aa		11.32	□□□□□ -0.6
PTK2-233	ENST00000521562	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.32	□□□□□ -0.6
PTK2-233	ENST00000521562	IL25	Q9H293	177 aa		11.32	□□□□□ -0.6
PTK2-233	ENST00000521562	IL17RB	Q9NRM6	502 aa		11.32	□□□□□ -0.6
PTK2-233	ENST00000521562	PPP1R9A	Q9ULJ8	1098 aa		11.32	□□□□□ -0.6
PTK2-233	ENST00000521562	FRMPD3	Q5JV73	1810 aa		11.31	□□□□□ -0.6
PTK2-233	ENST00000521562	SLC15A5	A6NIM6	579 aa		11.31	□□□□□ -0.6
PTK2-233	ENST00000521562	VWA5A	O00534	786 aa		11.31	□□□□□ -0.6
PTK2-233	ENST00000521562	TTLL1	O95922	423 aa		11.31	□□□□□ -0.6
PTK2-233	ENST00000521562	FGR	P09769	529 aa		11.31	□□□□□ -0.6
PTK2-233	ENST00000521562	PRKAR2A	P13861	404 aa	Known RBP	11.31	□□□□□ -0.6
PTK2-233	ENST00000521562	ZKSCAN1	P17029	563 aa	Predicted RBP	11.31	□□□□□ -0.6
PTK2-233	ENST00000521562	CACNB2	Q08289	660 aa	Predicted RBP	11.31	□□□□□ -0.6
PTK2-233	ENST00000521562	MAP3K21	Q5TCX8	1036 aa		11.31	□□□□□ -0.6
PTK2-233	ENST00000521562	RASGRP2	Q7LDG7	609 aa		11.31	□□□□□ -0.6
PTK2-233	ENST00000521562	MB21D1	Q8N884	522 aa		11.31	□□□□□ -0.6
PTK2-233	ENST00000521562	CRISPLD2	Q9H0B8	497 aa		11.31	□□□□□ -0.6
PTK2-233	ENST00000521562	ZMYM6	O95789	1325 aa		11.31	□□□□□ -0.6
PTK2-233	ENST00000521562	TSPY2	A6NKD2	308 aa		11.3	□□□□□ -0.6
PTK2-233	ENST00000521562	ORC4	O43929	436 aa		11.3	□□□□□ -0.6
PTK2-233	ENST00000521562	RANBP6	O60518	1105 aa	Known RBP	11.3	□□□□□ -0.6
PTK2-233	ENST00000521562	TFRC	P02786	760 aa	Known RBP	11.3	□□□□□ -0.6
PTK2-233	ENST00000521562	ADORA2A	P29274	412 aa		11.3	□□□□□ -0.6
PTK2-233	ENST00000521562	CCND3	P30281	292 aa	Predicted RBP	11.3	□□□□□ -0.6
PTK2-233	ENST00000521562	TTC22	Q5TAA0	569 aa		11.3	□□□□□ -0.6
PTK2-233	ENST00000521562	PRPF38B	Q5VTL8	546 aa	Known RBP	11.3	□□□□□ -0.6
PTK2-233	ENST00000521562	NCAPG2	Q86XI2	1143 aa		11.3	□□□□□ -0.6
PTK2-233	ENST00000521562	TBC1D10C	Q8IV04	446 aa		11.3	□□□□□ -0.6
PTK2-233	ENST00000521562	GMCL1P1	Q8NEA9	526 aa		11.3	□□□□□ -0.6
PTK2-233	ENST00000521562	SHCBP1	Q8NEM2	672 aa		11.3	□□□□□ -0.6
PTK2-233	ENST00000521562	SLF1	Q9BQI6	1058 aa		11.3	□□□□□ -0.6
PTK2-233	ENST00000521562	HMX1	Q9NP08	348 aa	Predicted RBP	11.3	□□□□□ -0.6
PTK2-233	ENST00000521562	DIAPH3	Q9NSV4	1193 aa		11.3	□□□□□ -0.6
PTK2-233	ENST00000521562	ZNF214	Q9UL59	606 aa	Predicted RBP	11.3	□□□□□ -0.6
PTK2-233	ENST00000521562	IVNS1ABP	Q9Y6Y0	642 aa		11.3	□□□□□ -0.6
PTK2-233	ENST00000521562	RPTOR	Q8N122	1335 aa		11.3	□□□□□ -0.6
PTK2-233	ENST00000521562	PLXNA1	Q9UIW2	1896 aa		11.29	□□□□□ -0.6
PTK2-233	ENST00000521562	ALPK3	Q96L96	1907 aa		11.29	□□□□□ -0.6
PTK2-233	ENST00000521562	COBL	O75128	1261 aa		11.29	□□□□□ -0.6
PTK2-233	ENST00000521562	IGHA2	P01877	340 aa		11.29	□□□□□ -0.6
PTK2-233	ENST00000521562	HOXC6	P09630	235 aa		11.29	□□□□□ -0.6
PTK2-233	ENST00000521562	NOV	P48745	357 aa		11.29	□□□□□ -0.6
PTK2-233	ENST00000521562	RRP12	Q5JTH9	1297 aa	Known RBP	11.29	□□□□□ -0.6
PTK2-233	ENST00000521562	SLFN13	Q68D06	897 aa		11.29	□□□□□ -0.6
PTK2-233	ENST00000521562	TRMT44	Q8IYL2	757 aa	Known RBP	11.29	□□□□□ -0.6
PTK2-233	ENST00000521562	DIS3L	Q8TF46	1054 aa	Known RBP	11.29	□□□□□ -0.6
PTK2-233	ENST00000521562	KIFC2	Q96AC6	838 aa		11.29	□□□□□ -0.6
PTK2-233	ENST00000521562	STX8	Q9UNK0	236 aa		11.29	□□□□□ -0.6
PTK2-233	ENST00000521562	STRN	O43815	780 aa		11.28	□□□□□ -0.6
PTK2-233	ENST00000521562	FARP2	O94887	1054 aa	Predicted RBP	11.28	□□□□□ -0.6
PTK2-233	ENST00000521562	BMP3	P12645	472 aa		11.28	□□□□□ -0.6
PTK2-233	ENST00000521562	CYP2C19	P33261	490 aa		11.28	□□□□□ -0.6
PTK2-233	ENST00000521562	STAT3	P40763	770 aa		11.28	□□□□□ -0.6
PTK2-233	ENST00000521562	MNX1	P50219	401 aa	Predicted RBP	11.28	□□□□□ -0.6
PTK2-233	ENST00000521562	MFAP1	P55081	439 aa	Known RBP	11.28	□□□□□ -0.6
PTK2-233	ENST00000521562	DPP9	Q86TI2	863 aa		11.28	□□□□□ -0.6
PTK2-233	ENST00000521562	SKAP1	Q86WV1	359 aa		11.28	□□□□□ -0.6
PTK2-233	ENST00000521562	RIOX2	Q8IUF8	465 aa		11.28	□□□□□ -0.6
PTK2-233	ENST00000521562	PRPF38A	Q8NAV1	312 aa	Known RBP	11.28	□□□□□ -0.6
PTK2-233	ENST00000521562	TRPV1	Q8NER1	839 aa		11.28	□□□□□ -0.6
PTK2-233	ENST00000521562	MROH8	Q9H579	483 aa		11.28	□□□□□ -0.6
PTK2-233	ENST00000521562	TOMM22	Q9NS69	142 aa		11.28	□□□□□ -0.6
PTK2-233	ENST00000521562	SYNPO2	Q9UMS6	1093 aa		11.28	□□□□□ -0.6
PTK2-233	ENST00000521562	RIPK3	Q9Y572	518 aa		11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms