RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 INCENPQ9NQS7 918 aa25.65■■□□□ 1.7
HOXA3-204ENST00000521401 CLIP2Q9UDT6 1046 aa25.65■■□□□ 1.7
HOXA3-204ENST00000521401 PLIN4Q96Q06 1357 aa25.65■■□□□ 1.7
HOXA3-204ENST00000521401 F5H6K3 240 aa25.64■■□□□ 1.7
HOXA3-204ENST00000521401 NDUFB10O96000 172 aa25.64■■□□□ 1.7
HOXA3-204ENST00000521401 SLC3A2P08195 630 aaKnown RBP25.64■■□□□ 1.7
HOXA3-204ENST00000521401 ZKSCAN1P17029 563 aaPredicted RBP25.64■■□□□ 1.7
HOXA3-204ENST00000521401 ERCC3P19447 782 aa25.64■■□□□ 1.7
HOXA3-204ENST00000521401 KLRC3Q07444 240 aa25.64■■□□□ 1.7
HOXA3-204ENST00000521401 TMEM132BQ14DG7 1078 aa25.64■■□□□ 1.7
HOXA3-204ENST00000521401 FAM47AQ5JRC9 791 aa25.64■■□□□ 1.7
HOXA3-204ENST00000521401 TRMT44Q8IYL2 757 aaKnown RBP25.64■■□□□ 1.7
HOXA3-204ENST00000521401 HMX1Q9NP08 348 aaPredicted RBP25.64■■□□□ 1.7
HOXA3-204ENST00000521401 ANAPC4Q9UJX5 808 aa25.64■■□□□ 1.7
HOXA3-204ENST00000521401 PPP1R9AQ9ULJ8 1098 aa25.64■■□□□ 1.7
HOXA3-204ENST00000521401 A0A0G2JMZ2 1700 aa25.63■■□□□ 1.69
HOXA3-204ENST00000521401 HOXC6P09630 235 aa25.63■■□□□ 1.69
HOXA3-204ENST00000521401 PRKAR2AP13861 404 aaKnown RBP25.63■■□□□ 1.69
HOXA3-204ENST00000521401 SDSP20132 328 aa25.63■■□□□ 1.69
HOXA3-204ENST00000521401 TFAP4Q01664 338 aa25.63■■□□□ 1.69
HOXA3-204ENST00000521401 CTDSPL2Q05D32 466 aa25.63■■□□□ 1.69
HOXA3-204ENST00000521401 NUP88Q99567 741 aaPredicted RBP25.63■■□□□ 1.69
HOXA3-204ENST00000521401 FLRT1Q9NZU1 646 aa25.63■■□□□ 1.69
HOXA3-204ENST00000521401 RAD21O60216 631 aa25.62■■□□□ 1.69
HOXA3-204ENST00000521401 TFRCP02786 760 aaKnown RBP25.62■■□□□ 1.69
HOXA3-204ENST00000521401 TSPY3P0CV98 308 aa25.62■■□□□ 1.69
HOXA3-204ENST00000521401 TSPY8P0CW00 308 aa25.62■■□□□ 1.69
HOXA3-204ENST00000521401 CAPN2P17655 700 aa25.62■■□□□ 1.69
HOXA3-204ENST00000521401 CACNB2Q08289 660 aaPredicted RBP25.62■■□□□ 1.69
HOXA3-204ENST00000521401 SAMD1Q6SPF0 538 aaPredicted RBP25.62■■□□□ 1.69
HOXA3-204ENST00000521401 REPS2Q8NFH8 660 aa25.62■■□□□ 1.69
HOXA3-204ENST00000521401 NPLOC4Q8TAT6 608 aa25.62■■□□□ 1.69
HOXA3-204ENST00000521401 VWA5AO00534 786 aa25.61■■□□□ 1.69
HOXA3-204ENST00000521401 FARP2O94887 1054 aaPredicted RBP25.61■■□□□ 1.69
HOXA3-204ENST00000521401 TTLL1O95922 423 aa25.61■■□□□ 1.69
HOXA3-204ENST00000521401 IGHA2P01877 340 aa25.61■■□□□ 1.69
HOXA3-204ENST00000521401 FGAP02671 866 aa25.61■■□□□ 1.69
HOXA3-204ENST00000521401 HSPD1P10809 573 aaKnown RBP25.61■■□□□ 1.69
HOXA3-204ENST00000521401 SYNPO2Q9UMS6 1093 aa25.61■■□□□ 1.69
HOXA3-204ENST00000521401 IVNS1ABPQ9Y6Y0 642 aa25.61■■□□□ 1.69
HOXA3-204ENST00000521401 FGRP09769 529 aa25.6■■□□□ 1.69
HOXA3-204ENST00000521401 PDE4AP27815 886 aa25.6■■□□□ 1.69
HOXA3-204ENST00000521401 PLS1Q14651 629 aa25.6■■□□□ 1.69
HOXA3-204ENST00000521401 LRRC47Q8N1G4 583 aaKnown RBP25.6■■□□□ 1.69
HOXA3-204ENST00000521401 CCDC171Q6TFL3 1326 aa25.6■■□□□ 1.69
HOXA3-204ENST00000521401 STRNO43815 780 aa25.59■■□□□ 1.69
HOXA3-204ENST00000521401 ADORA2AP29274 412 aa25.59■■□□□ 1.69
HOXA3-204ENST00000521401 NCAPG2Q86XI2 1143 aa25.59■■□□□ 1.69
HOXA3-204ENST00000521401 GMCL1P1Q8NEA9 526 aa25.59■■□□□ 1.69
HOXA3-204ENST00000521401 MROH8Q9H579 483 aa25.59■■□□□ 1.69
HOXA3-204ENST00000521401 ZNF214Q9UL59 606 aaPredicted RBP25.59■■□□□ 1.69
HOXA3-204ENST00000521401 COBLO75128 1261 aa25.58■■□□□ 1.69
HOXA3-204ENST00000521401 CCND3P30281 292 aaPredicted RBP25.58■■□□□ 1.69
HOXA3-204ENST00000521401 RIOX2Q8IUF8 465 aa25.58■■□□□ 1.69
HOXA3-204ENST00000521401 SLF1Q9BQI6 1058 aa25.58■■□□□ 1.69
HOXA3-204ENST00000521401 IL17RBQ9NRM6 502 aa25.58■■□□□ 1.69
HOXA3-204ENST00000521401 ZMYM6O95789 1325 aa25.58■■□□□ 1.69
HOXA3-204ENST00000521401 ORC4O43929 436 aa25.57■■□□□ 1.68
HOXA3-204ENST00000521401 SLC25A27O95847 323 aa25.57■■□□□ 1.68
HOXA3-204ENST00000521401 MNX1P50219 401 aaPredicted RBP25.57■■□□□ 1.68
HOXA3-204ENST00000521401 OGDHLQ9ULD0 1010 aa25.57■■□□□ 1.68
HOXA3-204ENST00000521401 STAT3P40763 770 aa25.56■■□□□ 1.68
HOXA3-204ENST00000521401 NOVP48745 357 aa25.56■■□□□ 1.68
HOXA3-204ENST00000521401 SLFN13Q68D06 897 aa25.56■■□□□ 1.68
HOXA3-204ENST00000521401 ABRAQ8N0Z2 381 aa25.56■■□□□ 1.68
HOXA3-204ENST00000521401 DIS3LQ8TF46 1054 aaKnown RBP25.56■■□□□ 1.68
HOXA3-204ENST00000521401 PARP14Q460N5 1801 aa25.56■■□□□ 1.68
HOXA3-204ENST00000521401 TSPY2A6NKD2 308 aa25.55■■□□□ 1.68
HOXA3-204ENST00000521401 NMT2O60551 498 aa25.55■■□□□ 1.68
HOXA3-204ENST00000521401 MFSD14CQ5VZR4 134 aa25.55■■□□□ 1.68
HOXA3-204ENST00000521401 LHX8Q68G74 356 aa25.55■■□□□ 1.68
HOXA3-204ENST00000521401 DPP9Q86TI2 863 aa25.55■■□□□ 1.68
HOXA3-204ENST00000521401 NBPF3Q9H094 633 aa25.55■■□□□ 1.68
HOXA3-204ENST00000521401 OLFML2BQ68BL8 750 aa25.54■■□□□ 1.68
HOXA3-204ENST00000521401 ANKLE1Q8NAG6 615 aa25.54■■□□□ 1.68
HOXA3-204ENST00000521401 PRPF38AQ8NAV1 312 aaKnown RBP25.54■■□□□ 1.68
HOXA3-204ENST00000521401 PAWRQ96IZ0 340 aaKnown RBP25.54■■□□□ 1.68
HOXA3-204ENST00000521401 RANBP6O60518 1105 aaKnown RBP25.53■■□□□ 1.68
HOXA3-204ENST00000521401 GSPT1P15170 499 aaKnown RBP25.53■■□□□ 1.68
HOXA3-204ENST00000521401 CYP2C19P33261 490 aa25.53■■□□□ 1.68
HOXA3-204ENST00000521401 CWC27Q6UX04 472 aaKnown RBP25.53■■□□□ 1.68
HOXA3-204ENST00000521401 TRPV1Q8NER1 839 aa25.53■■□□□ 1.68
HOXA3-204ENST00000521401 HTATIP2Q9BUP3 242 aa25.53■■□□□ 1.68
HOXA3-204ENST00000521401 FEM1BQ9UK73 627 aa25.53■■□□□ 1.68
HOXA3-204ENST00000521401 ZNF236Q9UL36 1845 aa25.52■■□□□ 1.68
HOXA3-204ENST00000521401 FCER1AP12319 257 aa25.52■■□□□ 1.68
HOXA3-204ENST00000521401 BMP3P12645 472 aa25.52■■□□□ 1.68
HOXA3-204ENST00000521401 HAND2P61296 217 aa25.52■■□□□ 1.68
HOXA3-204ENST00000521401 DPF3Q92784 378 aa25.52■■□□□ 1.68
HOXA3-204ENST00000521401 GMCL1Q96IK5 515 aa25.52■■□□□ 1.68
HOXA3-204ENST00000521401 DIAPH3Q9NSV4 1193 aa25.52■■□□□ 1.68
HOXA3-204ENST00000521401 STX8Q9UNK0 236 aa25.52■■□□□ 1.68
HOXA3-204ENST00000521401 H0YGN5 161 aa25.51■■□□□ 1.67
HOXA3-204ENST00000521401 ATP2A1O14983 1001 aa25.51■■□□□ 1.67
HOXA3-204ENST00000521401 MFAP1P55081 439 aaKnown RBP25.51■■□□□ 1.67
HOXA3-204ENST00000521401 PPP4R3BQ5MIZ7 849 aa25.51■■□□□ 1.67
HOXA3-204ENST00000521401 NECAB2Q7Z6G3 386 aa25.51■■□□□ 1.67
HOXA3-204ENST00000521401 TBC1D10CQ8IV04 446 aa25.51■■□□□ 1.67
HOXA3-204ENST00000521401 KIFC2Q96AC6 838 aa25.51■■□□□ 1.67
HOXA3-204ENST00000521401 MMP19Q99542 508 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms