RNA–Protein interactions for RNA: ENST00000521398.5

LAMA4-215, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,330 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-215ENST00000521398 SPICE1Q8N0Z3 855 aa22.77■■□□□ 1.24
LAMA4-215ENST00000521398 ZCCHC17Q9NP64 241 aaKnown RBP22.77■■□□□ 1.24
LAMA4-215ENST00000521398 BRPF3Q9ULD4 1205 aa22.77■■□□□ 1.24
LAMA4-215ENST00000521398 KIF5BP33176 963 aa22.76■■□□□ 1.23
LAMA4-215ENST00000521398 VEGFBP49765 207 aa22.76■■□□□ 1.23
LAMA4-215ENST00000521398 KIF23Q02241 960 aaPredicted RBP22.76■■□□□ 1.23
LAMA4-215ENST00000521398 GRM4Q14833 912 aa22.76■■□□□ 1.23
LAMA4-215ENST00000521398 NID2Q14112 1375 aa22.75■■□□□ 1.23
LAMA4-215ENST00000521398 THSD7BQ9C0I4 1608 aa22.75■■□□□ 1.23
LAMA4-215ENST00000521398 USP17L15C9J2P7 530 aa22.75■■□□□ 1.23
LAMA4-215ENST00000521398 USP17L13C9JLJ4 530 aa22.75■■□□□ 1.23
LAMA4-215ENST00000521398 USP17L11C9JVI0 530 aa22.75■■□□□ 1.23
LAMA4-215ENST00000521398 USP17L18D6R9N7 530 aa22.75■■□□□ 1.23
LAMA4-215ENST00000521398 USP17L22D6RA61 530 aa22.75■■□□□ 1.23
LAMA4-215ENST00000521398 USP17L17D6RBQ6 530 aa22.75■■□□□ 1.23
LAMA4-215ENST00000521398 USP17L19D6RCP7 530 aa22.75■■□□□ 1.23
LAMA4-215ENST00000521398 USP17L20D6RJB6 530 aa22.75■■□□□ 1.23
LAMA4-215ENST00000521398 PLA2G6O60733 806 aa22.75■■□□□ 1.23
LAMA4-215ENST00000521398 PARP1P09874 1014 aaKnown RBP22.75■■□□□ 1.23
LAMA4-215ENST00000521398 TM4SF4P48230 202 aa22.75■■□□□ 1.23
LAMA4-215ENST00000521398 ZNF543Q08ER8 600 aa22.75■■□□□ 1.23
LAMA4-215ENST00000521398 USP17L24Q0WX57 530 aa22.75■■□□□ 1.23
LAMA4-215ENST00000521398 DGKZQ13574 1117 aa22.75■■□□□ 1.23
LAMA4-215ENST00000521398 OTUD7BQ6GQQ9 843 aa22.75■■□□□ 1.23
LAMA4-215ENST00000521398 GPAT2Q6NUI2 795 aa22.75■■□□□ 1.23
LAMA4-215ENST00000521398 CTCFLQ8NI51 663 aaPredicted RBP22.75■■□□□ 1.23
LAMA4-215ENST00000521398 NUP133Q8WUM0 1156 aa22.75■■□□□ 1.23
LAMA4-215ENST00000521398 RPAP3Q9H6T3 665 aaPredicted RBP22.75■■□□□ 1.23
LAMA4-215ENST00000521398 GOLGA8BA8MQT2 603 aa22.74■■□□□ 1.23
LAMA4-215ENST00000521398 CCDC96Q2M329 555 aa22.74■■□□□ 1.23
LAMA4-215ENST00000521398 FAM83BQ5T0W9 1011 aa22.74■■□□□ 1.23
LAMA4-215ENST00000521398 TREML2Q5T2D2 321 aa22.74■■□□□ 1.23
LAMA4-215ENST00000521398 MICU3Q86XE3 530 aa22.74■■□□□ 1.23
LAMA4-215ENST00000521398 RBM28Q9NW13 759 aaKnown RBP22.74■■□□□ 1.23
LAMA4-215ENST00000521398 PNMA3Q9UL41 463 aa22.74■■□□□ 1.23
LAMA4-215ENST00000521398 LIMCH1Q9UPQ0 1083 aa22.74■■□□□ 1.23
LAMA4-215ENST00000521398 MTMR7Q9Y216 660 aa22.74■■□□□ 1.23
LAMA4-215ENST00000521398 MYPNQ86TC9 1320 aa22.73■■□□□ 1.23
LAMA4-215ENST00000521398 CCDC196A0A1B0GTZ2 297 aa22.73■■□□□ 1.23
LAMA4-215ENST00000521398 BTBD19C9JJ37 291 aa22.73■■□□□ 1.23
LAMA4-215ENST00000521398 PDIA3P30101 505 aaKnown RBP22.73■■□□□ 1.23
LAMA4-215ENST00000521398 GNAQP50148 359 aa22.73■■□□□ 1.23
LAMA4-215ENST00000521398 CATSPERGQ6ZRH7 1159 aa22.73■■□□□ 1.23
LAMA4-215ENST00000521398 FAM160B2Q86V87 743 aa22.73■■□□□ 1.23
LAMA4-215ENST00000521398 FANCBQ8NB91 859 aa22.73■■□□□ 1.23
LAMA4-215ENST00000521398 ZSCAN31Q96LW9 406 aaPredicted RBP22.73■■□□□ 1.23
LAMA4-215ENST00000521398 NUP88Q99567 741 aaPredicted RBP22.73■■□□□ 1.23
LAMA4-215ENST00000521398 MYL10Q9BUA6 226 aa22.73■■□□□ 1.23
LAMA4-215ENST00000521398 TANGO6Q9C0B7 1094 aa22.73■■□□□ 1.23
LAMA4-215ENST00000521398 MAD2L2Q9UI95 211 aa22.73■■□□□ 1.23
LAMA4-215ENST00000521398 FEM1BQ9UK73 627 aa22.73■■□□□ 1.23
LAMA4-215ENST00000521398 NAP1L2Q9ULW6 460 aaPredicted RBP22.73■■□□□ 1.23
LAMA4-215ENST00000521398 PALM3A6NDB9 673 aaPredicted RBP22.72■■□□□ 1.23
LAMA4-215ENST00000521398 GOLGA8AA7E2F4 631 aa22.72■■□□□ 1.23
LAMA4-215ENST00000521398 AOC2O75106 756 aa22.72■■□□□ 1.23
LAMA4-215ENST00000521398 OSBPP22059 807 aa22.72■■□□□ 1.23
LAMA4-215ENST00000521398 METAP2P50579 478 aaKnown RBP eCLIP22.72■■□□□ 1.23
LAMA4-215ENST00000521398 STAT2P52630 851 aa22.72■■□□□ 1.23
LAMA4-215ENST00000521398 BTNL9Q6UXG8 535 aa22.72■■□□□ 1.23
LAMA4-215ENST00000521398 KCTD1Q719H9 257 aa22.72■■□□□ 1.23
LAMA4-215ENST00000521398 IFNL1Q8IU54 200 aa22.72■■□□□ 1.23
LAMA4-215ENST00000521398 CHURC1Q8WUH1 139 aa22.72■■□□□ 1.23
LAMA4-215ENST00000521398 PTPN18Q99952 460 aa22.72■■□□□ 1.23
LAMA4-215ENST00000521398 LZTS2Q9BRK4 669 aa22.72■■□□□ 1.23
LAMA4-215ENST00000521398 TPCN1Q9ULQ1 816 aa22.72■■□□□ 1.23
LAMA4-215ENST00000521398 TMEM232C9JQI7 657 aa22.71■■□□□ 1.23
LAMA4-215ENST00000521398 ALDH1A1P00352 501 aa22.71■■□□□ 1.23
LAMA4-215ENST00000521398 COG2Q14746 738 aa22.71■■□□□ 1.23
LAMA4-215ENST00000521398 RTN1Q16799 776 aa22.71■■□□□ 1.23
LAMA4-215ENST00000521398 CHMP4CQ96CF2 233 aa22.71■■□□□ 1.23
LAMA4-215ENST00000521398 SH2B1Q9NRF2 756 aaPredicted RBP22.71■■□□□ 1.23
LAMA4-215ENST00000521398 ISY1Q9ULR0 285 aaKnown RBP22.71■■□□□ 1.23
LAMA4-215ENST00000521398 HPS5Q9UPZ3 1129 aa22.71■■□□□ 1.23
LAMA4-215ENST00000521398 PDHXO00330 501 aa22.7■■□□□ 1.22
LAMA4-215ENST00000521398 SMARCA1P28370 1054 aa22.7■■□□□ 1.22
LAMA4-215ENST00000521398 IRX3P78415 501 aaPredicted RBP22.7■■□□□ 1.22
LAMA4-215ENST00000521398 RASGRP2Q7LDG7 609 aa22.7■■□□□ 1.22
LAMA4-215ENST00000521398 FAM43AQ8N2R8 423 aa22.7■■□□□ 1.22
LAMA4-215ENST00000521398 PRPF38AQ8NAV1 312 aaKnown RBP22.7■■□□□ 1.22
LAMA4-215ENST00000521398 ZIC5Q96T25 663 aa22.7■■□□□ 1.22
LAMA4-215ENST00000521398 SLF1Q9BQI6 1058 aa22.7■■□□□ 1.22
LAMA4-215ENST00000521398 SLKQ9H2G2 1235 aaPredicted RBP22.7■■□□□ 1.22
LAMA4-215ENST00000521398 HOXC10Q9NYD6 342 aa22.7■■□□□ 1.22
LAMA4-215ENST00000521398 FRMPD2Q68DX3 1309 aaPredicted RBP22.7■■□□□ 1.22
LAMA4-215ENST00000521398 KLRF2D3W0D1 207 aa22.69■■□□□ 1.22
LAMA4-215ENST00000521398 IGF2BP3O00425 579 aaKnown RBP eCLIP22.69■■□□□ 1.22
LAMA4-215ENST00000521398 DHX16O60231 1041 aaKnown RBP22.69■■□□□ 1.22
LAMA4-215ENST00000521398 PFKFB2O60825 505 aa22.69■■□□□ 1.22
LAMA4-215ENST00000521398 FLOT1O75955 427 aa22.69■■□□□ 1.22
LAMA4-215ENST00000521398 FDX1P10109 184 aa22.69■■□□□ 1.22
LAMA4-215ENST00000521398 RXRAP19793 462 aa22.69■■□□□ 1.22
LAMA4-215ENST00000521398 GTF3C2Q8WUA4 911 aaPredicted RBP22.69■■□□□ 1.22
LAMA4-215ENST00000521398 SNX21Q969T3 373 aa22.69■■□□□ 1.22
LAMA4-215ENST00000521398 PARK7Q99497 189 aaKnown RBP22.69■■□□□ 1.22
LAMA4-215ENST00000521398 LARP6Q9BRS8 491 aaKnown RBP22.69■■□□□ 1.22
LAMA4-215ENST00000521398 ASCC2Q9H1I8 757 aaPredicted RBP22.69■■□□□ 1.22
LAMA4-215ENST00000521398 GPCPD1Q9NPB8 672 aa22.69■■□□□ 1.22
LAMA4-215ENST00000521398 PPP1R9AQ9ULJ8 1098 aa22.69■■□□□ 1.22
LAMA4-215ENST00000521398 GOLGA8HP0CJ92 632 aa22.68■■□□□ 1.22
LAMA4-215ENST00000521398 IKQ13123 557 aaPredicted RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms