RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 PI4KAP1Q8N8J0 262 aa9.17□□□□□ -0.94
CTNNA1-227ENST00000521387 NEK9Q8TD19 979 aa9.17□□□□□ -0.94
CTNNA1-227ENST00000521387 EDAQ92838 391 aa9.17□□□□□ -0.94
CTNNA1-227ENST00000521387 PBXIP1Q96AQ6 731 aa9.17□□□□□ -0.94
CTNNA1-227ENST00000521387 IDI2Q9BXS1 227 aa9.17□□□□□ -0.94
CTNNA1-227ENST00000521387 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.17□□□□□ -0.94
CTNNA1-227ENST00000521387 TLR9Q9NR96 1032 aa9.17□□□□□ -0.94
CTNNA1-227ENST00000521387 SALL2Q9Y467 1007 aaPredicted RBP9.17□□□□□ -0.94
CTNNA1-227ENST00000521387 SLC4A7Q9Y6M7 1214 aa9.17□□□□□ -0.94
CTNNA1-227ENST00000521387 DOCK2Q92608 1830 aa9.17□□□□□ -0.94
CTNNA1-227ENST00000521387 MAST3O60307 1309 aa9.16□□□□□ -0.94
CTNNA1-227ENST00000521387 TMEM221A6NGB7 291 aa9.16□□□□□ -0.94
CTNNA1-227ENST00000521387 M0R296 226 aa9.16□□□□□ -0.94
CTNNA1-227ENST00000521387 TBC1D12O60347 775 aa9.16□□□□□ -0.94
CTNNA1-227ENST00000521387 COBLO75128 1261 aa9.16□□□□□ -0.94
CTNNA1-227ENST00000521387 ADAMTS4O75173 837 aa9.16□□□□□ -0.94
CTNNA1-227ENST00000521387 ENTPD3O75355 529 aa9.16□□□□□ -0.94
CTNNA1-227ENST00000521387 ATP2A2P16615 1042 aaKnown RBP9.16□□□□□ -0.94
CTNNA1-227ENST00000521387 BACE1P56817 501 aa9.16□□□□□ -0.94
CTNNA1-227ENST00000521387 MTMR2Q13614 643 aa9.16□□□□□ -0.94
CTNNA1-227ENST00000521387 TMEM67Q5HYA8 995 aa9.16□□□□□ -0.94
CTNNA1-227ENST00000521387 CCSAPQ6IQ19 270 aaPredicted RBP9.16□□□□□ -0.94
CTNNA1-227ENST00000521387 KSR2Q6VAB6 950 aa9.16□□□□□ -0.94
CTNNA1-227ENST00000521387 SPOCK2Q92563 424 aa9.16□□□□□ -0.94
CTNNA1-227ENST00000521387 LENG1Q96BZ8 264 aaPredicted RBP9.16□□□□□ -0.94
CTNNA1-227ENST00000521387 FSD1Q9BTV5 496 aa9.16□□□□□ -0.94
CTNNA1-227ENST00000521387 XPNPEP3Q9NQH7 507 aa9.16□□□□□ -0.94
CTNNA1-227ENST00000521387 PPP4R2Q9NY27 417 aa9.16□□□□□ -0.94
CTNNA1-227ENST00000521387 ADAMTS8Q9UP79 889 aa9.16□□□□□ -0.94
CTNNA1-227ENST00000521387 USP17L5A8MUK1 530 aa9.15□□□□□ -0.94
CTNNA1-227ENST00000521387 H3BQ06 376 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-227ENST00000521387 APBB1O00213 710 aa9.15□□□□□ -0.94
CTNNA1-227ENST00000521387 NEFMP07197 916 aa9.15□□□□□ -0.94
CTNNA1-227ENST00000521387 NBL1P41271 181 aa9.15□□□□□ -0.94
CTNNA1-227ENST00000521387 ACLYP53396 1101 aa9.15□□□□□ -0.94
CTNNA1-227ENST00000521387 IFIT5Q13325 482 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-227ENST00000521387 ACAP1Q15027 740 aa9.15□□□□□ -0.94
CTNNA1-227ENST00000521387 LDHAL6AQ6ZMR3 332 aa9.15□□□□□ -0.94
CTNNA1-227ENST00000521387 TRIM67Q6ZTA4 783 aa9.15□□□□□ -0.94
CTNNA1-227ENST00000521387 DGLUCYQ7Z3D6 616 aa9.15□□□□□ -0.94
CTNNA1-227ENST00000521387 IFNLR1Q8IU57 520 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-227ENST00000521387 FAM126BQ8IXS8 530 aa9.15□□□□□ -0.94
CTNNA1-227ENST00000521387 WDR18Q9BV38 432 aa9.15□□□□□ -0.94
CTNNA1-227ENST00000521387 PUS3Q9BZE2 481 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-227ENST00000521387 OSBPL5Q9H0X9 879 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-227ENST00000521387 MTIF3Q9H2K0 278 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-227ENST00000521387 STARD7Q9NQZ5 370 aa9.15□□□□□ -0.94
CTNNA1-227ENST00000521387 BTBD7Q9P203 1132 aa9.15□□□□□ -0.94
CTNNA1-227ENST00000521387 RABGAP1Q9Y3P9 1069 aa9.15□□□□□ -0.94
CTNNA1-227ENST00000521387 LAS1LQ9Y4W2 734 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-227ENST00000521387 FLNBO75369 2602 aaKnown RBP9.15□□□□□ -0.95
CTNNA1-227ENST00000521387 ZNF536O15090 1300 aa9.14□□□□□ -0.95
CTNNA1-227ENST00000521387 GLRX3O76003 335 aaKnown RBP9.14□□□□□ -0.95
CTNNA1-227ENST00000521387 CD4P01730 458 aa9.14□□□□□ -0.95
CTNNA1-227ENST00000521387 NUDT7P0C024 238 aa9.14□□□□□ -0.95
CTNNA1-227ENST00000521387 TAL1P17542 331 aaPredicted RBP9.14□□□□□ -0.95
CTNNA1-227ENST00000521387 CAP2P40123 477 aa9.14□□□□□ -0.95
CTNNA1-227ENST00000521387 TTLL4Q14679 1199 aa9.14□□□□□ -0.95
CTNNA1-227ENST00000521387 PKN1Q16512 942 aa9.14□□□□□ -0.95
CTNNA1-227ENST00000521387 SHROOM1Q2M3G4 852 aaPredicted RBP9.14□□□□□ -0.95
CTNNA1-227ENST00000521387 WDR78Q5VTH9 848 aa9.14□□□□□ -0.95
CTNNA1-227ENST00000521387 RNF180Q86T96 592 aa9.14□□□□□ -0.95
CTNNA1-227ENST00000521387 ADHFE1Q8IWW8 467 aa9.14□□□□□ -0.95
CTNNA1-227ENST00000521387 ZSCAN29Q8IWY8 852 aaPredicted RBP9.14□□□□□ -0.95
CTNNA1-227ENST00000521387 ADSSL1Q8N142 457 aa9.14□□□□□ -0.95
CTNNA1-227ENST00000521387 FBXL6Q8N531 539 aa9.14□□□□□ -0.95
CTNNA1-227ENST00000521387 KLHDC9Q8NEP7 349 aa9.14□□□□□ -0.95
CTNNA1-227ENST00000521387 GDPD5Q8WTR4 605 aa9.14□□□□□ -0.95
CTNNA1-227ENST00000521387 TSEN34Q9BSV6 310 aaKnown RBP9.14□□□□□ -0.95
CTNNA1-227ENST00000521387 TBC1D2Q9BYX2 928 aa9.14□□□□□ -0.95
CTNNA1-227ENST00000521387 EMILIN3Q9NT22 766 aa9.14□□□□□ -0.95
CTNNA1-227ENST00000521387 LMCD1Q9NZU5 365 aa9.14□□□□□ -0.95
CTNNA1-227ENST00000521387 HCSTQ9UBK5 93 aa9.14□□□□□ -0.95
CTNNA1-227ENST00000521387 MYADML2A6NDP7 307 aa9.13□□□□□ -0.95
CTNNA1-227ENST00000521387 ADORA2AP29274 412 aa9.13□□□□□ -0.95
CTNNA1-227ENST00000521387 PRDX5P30044 214 aa9.13□□□□□ -0.95
CTNNA1-227ENST00000521387 AVPR2P30518 371 aa9.13□□□□□ -0.95
CTNNA1-227ENST00000521387 TMPOP42166 694 aaKnown RBP9.13□□□□□ -0.95
CTNNA1-227ENST00000521387 ST3GAL2Q16842 350 aa9.13□□□□□ -0.95
CTNNA1-227ENST00000521387 RNF135Q8IUD6 432 aa9.13□□□□□ -0.95
CTNNA1-227ENST00000521387 CDCA7LQ96GN5 454 aa9.13□□□□□ -0.95
CTNNA1-227ENST00000521387 WNT8AQ9H1J5 351 aa9.13□□□□□ -0.95
CTNNA1-227ENST00000521387 CWC22Q9HCG8 908 aaKnown RBP9.13□□□□□ -0.95
CTNNA1-227ENST00000521387 CNNM1Q9NRU3 951 aa9.13□□□□□ -0.95
CTNNA1-227ENST00000521387 PRKAG3Q9UGI9 489 aa9.13□□□□□ -0.95
CTNNA1-227ENST00000521387 COL4A4P53420 1690 aaPredicted RBP9.13□□□□□ -0.95
CTNNA1-227ENST00000521387 ZFYVE26Q68DK2 2539 aa9.12□□□□□ -0.95
CTNNA1-227ENST00000521387 ELL2O00472 640 aaPredicted RBP9.12□□□□□ -0.95
CTNNA1-227ENST00000521387 DDX58O95786 925 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-227ENST00000521387 RARBP10826 455 aa9.12□□□□□ -0.95
CTNNA1-227ENST00000521387 CCL23P55773 120 aa9.12□□□□□ -0.95
CTNNA1-227ENST00000521387 WDR43Q15061 677 aaKnown RBP eCLIP9.12□□□□□ -0.95
CTNNA1-227ENST00000521387 KCNA10Q16322 511 aa9.12□□□□□ -0.95
CTNNA1-227ENST00000521387 PUS10Q3MIT2 529 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-227ENST00000521387 DPP9Q86TI2 863 aa9.12□□□□□ -0.95
CTNNA1-227ENST00000521387 SUGP1Q8IWZ8 645 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-227ENST00000521387 GTF3C2Q8WUA4 911 aaPredicted RBP9.12□□□□□ -0.95
CTNNA1-227ENST00000521387 UPF3BQ9BZI7 483 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-227ENST00000521387 IRF2BPLQ9H1B7 796 aa9.12□□□□□ -0.95
CTNNA1-227ENST00000521387 SUGCTQ9HAC7 445 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms