RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 NIM1KQ8IY84 436 aa7.32□□□□□ -1.24
FAM49B-218ENST00000520887 TTLL11Q8NHH1 800 aa7.32□□□□□ -1.24
FAM49B-218ENST00000520887 JARID2Q92833 1246 aaPredicted RBP7.32□□□□□ -1.24
FAM49B-218ENST00000520887 SUCLG2Q96I99 432 aa7.32□□□□□ -1.24
FAM49B-218ENST00000520887 VPS33BQ9H267 617 aa7.32□□□□□ -1.24
FAM49B-218ENST00000520887 BICC1Q9H694 974 aaKnown RBP7.32□□□□□ -1.24
FAM49B-218ENST00000520887 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.32□□□□□ -1.24
FAM49B-218ENST00000520887 ZMIZ1Q9ULJ6 1067 aa7.32□□□□□ -1.24
FAM49B-218ENST00000520887 NOVA2Q9UNW9 492 aaKnown RBP7.32□□□□□ -1.24
FAM49B-218ENST00000520887 ATP6V0A2Q9Y487 856 aa7.32□□□□□ -1.24
FAM49B-218ENST00000520887 LRRFIP2Q9Y608 721 aaKnown RBP7.32□□□□□ -1.24
FAM49B-218ENST00000520887 MROH5Q6ZUA9 1318 aa7.31□□□□□ -1.24
FAM49B-218ENST00000520887 LTBP3Q9NS15 1303 aa7.31□□□□□ -1.24
FAM49B-218ENST00000520887 CHD4Q14839 1912 aa7.31□□□□□ -1.24
FAM49B-218ENST00000520887 FAM229AH3BQW9 127 aa7.31□□□□□ -1.24
FAM49B-218ENST00000520887 SRGAP3O43295 1099 aa7.31□□□□□ -1.24
FAM49B-218ENST00000520887 PPIP5K2O43314 1243 aa7.31□□□□□ -1.24
FAM49B-218ENST00000520887 UFL1O94874 794 aa7.31□□□□□ -1.24
FAM49B-218ENST00000520887 NBPF7P0C2Y1 421 aaPredicted RBP7.31□□□□□ -1.24
FAM49B-218ENST00000520887 LMNB1P20700 586 aa7.31□□□□□ -1.24
FAM49B-218ENST00000520887 IDH3AP50213 366 aa7.31□□□□□ -1.24
FAM49B-218ENST00000520887 EIF6P56537 245 aaKnown RBP7.31□□□□□ -1.24
FAM49B-218ENST00000520887 G3BP1Q13283 466 aaKnown RBP eCLIP7.31□□□□□ -1.24
FAM49B-218ENST00000520887 DGKZQ13574 1117 aa7.31□□□□□ -1.24
FAM49B-218ENST00000520887 DOC2BQ14184 412 aa7.31□□□□□ -1.24
FAM49B-218ENST00000520887 METTL24Q5JXM2 366 aa7.31□□□□□ -1.24
FAM49B-218ENST00000520887 VPS37DQ86XT2 251 aa7.31□□□□□ -1.24
FAM49B-218ENST00000520887 ERC1Q8IUD2 1116 aa7.31□□□□□ -1.24
FAM49B-218ENST00000520887 PSMD1Q99460 953 aa7.31□□□□□ -1.24
FAM49B-218ENST00000520887 MEIS3Q99687 375 aa7.31□□□□□ -1.24
FAM49B-218ENST00000520887 ZC3H12CQ9C0D7 883 aaKnown RBP7.31□□□□□ -1.24
FAM49B-218ENST00000520887 USP44Q9H0E7 712 aa7.31□□□□□ -1.24
FAM49B-218ENST00000520887 GREM2Q9H772 168 aa7.31□□□□□ -1.24
FAM49B-218ENST00000520887 KIAA1551Q9HCM1 1747 aa7.31□□□□□ -1.24
FAM49B-218ENST00000520887 BSDC1Q9NW68 430 aaPredicted RBP7.31□□□□□ -1.24
FAM49B-218ENST00000520887 DNAJB12Q9NXW2 375 aaKnown RBP7.31□□□□□ -1.24
FAM49B-218ENST00000520887 RNF181Q9P0P0 153 aa7.31□□□□□ -1.24
FAM49B-218ENST00000520887 SLC6A14Q9UN76 642 aa7.31□□□□□ -1.24
FAM49B-218ENST00000520887 USTQ9Y2C2 406 aa7.31□□□□□ -1.24
FAM49B-218ENST00000520887 KDM2BQ8NHM5 1336 aa7.3□□□□□ -1.24
FAM49B-218ENST00000520887 SPEF2Q9C093 1822 aa7.3□□□□□ -1.24
FAM49B-218ENST00000520887 FRAT2O75474 233 aaPredicted RBP7.3□□□□□ -1.24
FAM49B-218ENST00000520887 CSF1RP07333 972 aa7.3□□□□□ -1.24
FAM49B-218ENST00000520887 IFIT1P09914 478 aaKnown RBP7.3□□□□□ -1.24
FAM49B-218ENST00000520887 NFKB1P19838 968 aa7.3□□□□□ -1.24
FAM49B-218ENST00000520887 INPP5BP32019 993 aa7.3□□□□□ -1.24
FAM49B-218ENST00000520887 C11orf91Q3C1V1 193 aa7.3□□□□□ -1.24
FAM49B-218ENST00000520887 RABL6Q3YEC7 729 aaPredicted RBP7.3□□□□□ -1.24
FAM49B-218ENST00000520887 CAVIN4Q5BKX8 364 aa7.3□□□□□ -1.24
FAM49B-218ENST00000520887 ZNF804AQ7Z570 1209 aa7.3□□□□□ -1.24
FAM49B-218ENST00000520887 RPAP2Q8IXW5 612 aaPredicted RBP7.3□□□□□ -1.24
FAM49B-218ENST00000520887 SYNE4Q8N205 404 aa7.3□□□□□ -1.24
FAM49B-218ENST00000520887 PANK1Q8TE04 598 aa7.3□□□□□ -1.24
FAM49B-218ENST00000520887 CELF1Q92879 486 aaKnown RBP7.3□□□□□ -1.24
FAM49B-218ENST00000520887 MYO19Q96H55 970 aa7.3□□□□□ -1.24
FAM49B-218ENST00000520887 AKAP2Q9Y2D5 859 aa7.3□□□□□ -1.24
FAM49B-218ENST00000520887 LEMD3Q9Y2U8 911 aa7.3□□□□□ -1.24
FAM49B-218ENST00000520887 SLX4Q8IY92 1834 aa7.29□□□□□ -1.24
FAM49B-218ENST00000520887 TMEM88BA6NKF7 163 aa7.29□□□□□ -1.24
FAM49B-218ENST00000520887 PLIN1O60240 522 aa7.29□□□□□ -1.24
FAM49B-218ENST00000520887 MICAL2O94851 1124 aa7.29□□□□□ -1.24
FAM49B-218ENST00000520887 SLC5A1P13866 664 aa7.29□□□□□ -1.24
FAM49B-218ENST00000520887 YBX3P16989 372 aaKnown RBP eCLIP7.29□□□□□ -1.24
FAM49B-218ENST00000520887 KCNA3P22001 575 aa7.29□□□□□ -1.24
FAM49B-218ENST00000520887 YY1P25490 414 aa7.29□□□□□ -1.24
FAM49B-218ENST00000520887 IL15P40933 162 aaPredicted RBP7.29□□□□□ -1.24
FAM49B-218ENST00000520887 IARSP41252 1262 aaKnown RBP7.29□□□□□ -1.24
FAM49B-218ENST00000520887 ARSDP51689 593 aa7.29□□□□□ -1.24
FAM49B-218ENST00000520887 CASP7P55210 303 aa7.29□□□□□ -1.24
FAM49B-218ENST00000520887 PDE4CQ08493 712 aa7.29□□□□□ -1.24
FAM49B-218ENST00000520887 GORABQ5T7V8 394 aa7.29□□□□□ -1.24
FAM49B-218ENST00000520887 PSAPL1Q6NUJ1 521 aa7.29□□□□□ -1.24
FAM49B-218ENST00000520887 C16orf71Q8IYS4 520 aaPredicted RBP7.29□□□□□ -1.24
FAM49B-218ENST00000520887 STK32AQ8WU08 396 aa7.29□□□□□ -1.24
FAM49B-218ENST00000520887 NUDT8Q8WV74 236 aa7.29□□□□□ -1.24
FAM49B-218ENST00000520887 NACC1Q96RE7 527 aa7.29□□□□□ -1.24
FAM49B-218ENST00000520887 JPH1Q9HDC5 661 aaPredicted RBP7.29□□□□□ -1.24
FAM49B-218ENST00000520887 C11orf16Q9NQ32 467 aa7.29□□□□□ -1.24
FAM49B-218ENST00000520887 SEC31BQ9NQW1 1179 aa7.29□□□□□ -1.24
FAM49B-218ENST00000520887 GNL3LQ9NVN8 582 aaKnown RBP7.29□□□□□ -1.24
FAM49B-218ENST00000520887 LRRC37AA6NMS7 1700 aa7.29□□□□□ -1.24
FAM49B-218ENST00000520887 CIAO1O76071 339 aa7.28□□□□□ -1.24
FAM49B-218ENST00000520887 GRNP28799 593 aaKnown RBP7.28□□□□□ -1.24
FAM49B-218ENST00000520887 FOXO4P98177 505 aa7.28□□□□□ -1.24
FAM49B-218ENST00000520887 CHRNDQ07001 517 aa7.28□□□□□ -1.24
FAM49B-218ENST00000520887 TNIP1Q15025 636 aa7.28□□□□□ -1.24
FAM49B-218ENST00000520887 PUM3Q15397 648 aaKnown RBP7.28□□□□□ -1.24
FAM49B-218ENST00000520887 GRIK4Q16099 956 aa7.28□□□□□ -1.24
FAM49B-218ENST00000520887 PCSK7Q16549 785 aa7.28□□□□□ -1.24
FAM49B-218ENST00000520887 TMEM164Q5U3C3 297 aa7.28□□□□□ -1.24
FAM49B-218ENST00000520887 C9orf131Q5VYM1 1079 aa7.28□□□□□ -1.24
FAM49B-218ENST00000520887 SIL1Q9H173 461 aa7.28□□□□□ -1.24
FAM49B-218ENST00000520887 SUPT16HQ9Y5B9 1047 aaKnown RBP7.28□□□□□ -1.24
FAM49B-218ENST00000520887 MED23Q9ULK4 1368 aa7.28□□□□□ -1.24
FAM49B-218ENST00000520887 FER1L6Q2WGJ9 1857 aa7.28□□□□□ -1.24
FAM49B-218ENST00000520887 TIAM2Q8IVF5 1701 aa7.27□□□□□ -1.25
FAM49B-218ENST00000520887 IQCA1LA6NCM1 817 aa7.27□□□□□ -1.25
FAM49B-218ENST00000520887 EYA2O00167 538 aa7.27□□□□□ -1.25
FAM49B-218ENST00000520887 SURF6O75683 361 aaKnown RBP7.27□□□□□ -1.25
FAM49B-218ENST00000520887 RGS9O75916 674 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms