RNA–Protein interactions for RNA: ENST00000520655.5

IKBKB-216, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 2

Gene IKBKB, Length 3,777 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-216ENST00000520655 FMR1Q06787 632 aaKnown RBP eCLIP13.02□□□□□ -0.32
IKBKB-216ENST00000520655 FOXP4Q8IVH2 680 aaPredicted RBP13.02□□□□□ -0.32
IKBKB-216ENST00000520655 SMARCC2Q8TAQ2 1214 aa13.02□□□□□ -0.32
IKBKB-216ENST00000520655 NOC3LQ8WTT2 800 aaKnown RBP13.02□□□□□ -0.32
IKBKB-216ENST00000520655 GLIS2Q9BZE0 524 aaPredicted RBP13.02□□□□□ -0.32
IKBKB-216ENST00000520655 SCG2P13521 617 aa13.02□□□□□ -0.33
IKBKB-216ENST00000520655 FDPSP14324 419 aaKnown RBP13.02□□□□□ -0.33
IKBKB-216ENST00000520655 RBM28Q9NW13 759 aaKnown RBP13.02□□□□□ -0.33
IKBKB-216ENST00000520655 VIL1P09327 827 aaKnown RBP13.02□□□□□ -0.33
IKBKB-216ENST00000520655 SASS6Q6UVJ0 657 aa13.02□□□□□ -0.33
IKBKB-216ENST00000520655 C16orf86Q6ZW13 317 aa13.02□□□□□ -0.33
IKBKB-216ENST00000520655 SMAP1Q8IYB5 467 aaPredicted RBP13.02□□□□□ -0.33
IKBKB-216ENST00000520655 NEDD1Q8NHV4 660 aa13.02□□□□□ -0.33
IKBKB-216ENST00000520655 MTMR4Q9NYA4 1195 aa13.02□□□□□ -0.33
IKBKB-216ENST00000520655 PCDHA1Q9Y5I3 950 aa13.02□□□□□ -0.33
IKBKB-216ENST00000520655 NUP188Q5SRE5 1749 aa13.02□□□□□ -0.33
IKBKB-216ENST00000520655 SPTLC2O15270 562 aa13.01□□□□□ -0.33
IKBKB-216ENST00000520655 HMGCS2P54868 508 aa13.01□□□□□ -0.33
IKBKB-216ENST00000520655 LLPHQ9BRT6 129 aaKnown RBP13.01□□□□□ -0.33
IKBKB-216ENST00000520655 BECN2A8MW95 431 aa13.01□□□□□ -0.33
IKBKB-216ENST00000520655 AGBL3Q8NEM8 1001 aa13.01□□□□□ -0.33
IKBKB-216ENST00000520655 CDK5RAP3Q96JB5 506 aa13.01□□□□□ -0.33
IKBKB-216ENST00000520655 NUP62CLQ9H1M0 184 aa13.01□□□□□ -0.33
IKBKB-216ENST00000520655 ZBTB21Q9ULJ3 1066 aa13.01□□□□□ -0.33
IKBKB-216ENST00000520655 DDX39AO00148 427 aaKnown RBP13.01□□□□□ -0.33
IKBKB-216ENST00000520655 CCDC178Q5BJE1 867 aa13.01□□□□□ -0.33
IKBKB-216ENST00000520655 NOM1Q5C9Z4 860 aaKnown RBP13.01□□□□□ -0.33
IKBKB-216ENST00000520655 KLHL10Q6JEL2 608 aa13.01□□□□□ -0.33
IKBKB-216ENST00000520655 CCDC17Q96LX7 622 aa13.01□□□□□ -0.33
IKBKB-216ENST00000520655 ELP3Q9H9T3 547 aa13.01□□□□□ -0.33
IKBKB-216ENST00000520655 SUGT1Q9Y2Z0 365 aa13.01□□□□□ -0.33
IKBKB-216ENST00000520655 MYH3P11055 1940 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 KIF28PB7ZC32 967 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 ORC4O43929 436 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 MBD3O95983 291 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 IFNAR1P17181 557 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 SHMT1P34896 483 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 SBK1Q52WX2 424 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 MYSM1Q5VVJ2 828 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 LEO1Q8WVC0 666 aaPredicted RBP13□□□□□ -0.33
IKBKB-216ENST00000520655 ZSCAN16Q9H4T2 348 aaPredicted RBP13□□□□□ -0.33
IKBKB-216ENST00000520655 C6orf50Q9HD87 102 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 SWAP70Q9UH65 585 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 SALL1Q9NSC2 1324 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 USP17L15C9J2P7 530 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 USP17L13C9JLJ4 530 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 USP17L11C9JVI0 530 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 USP17L18D6R9N7 530 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 USP17L22D6RA61 530 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 USP17L17D6RBQ6 530 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 USP17L19D6RCP7 530 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 USP17L20D6RJB6 530 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 CHMP2AO43633 222 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 USP17L24Q0WX57 530 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 USP17L6PQ6QN14 398 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 C15orf52Q6ZUT6 534 aaKnown RBP13□□□□□ -0.33
IKBKB-216ENST00000520655 TMTC3Q6ZXV5 915 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 JMYQ8N9B5 988 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 FAM151AQ8WW52 585 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 TNKS1BP1Q9C0C2 1729 aaKnown RBP13□□□□□ -0.33
IKBKB-216ENST00000520655 BMP3P12645 472 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 LIG1P18858 919 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 MTMR2Q13614 643 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 DCAF15Q66K64 600 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 DGKHQ86XP1 1220 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 CUL5Q93034 780 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 TMEM260Q9NX78 707 aa13□□□□□ -0.33
IKBKB-216ENST00000520655 SLX4Q8IY92 1834 aa12.99□□□□□ -0.33
IKBKB-216ENST00000520655 CCNT1O60563 726 aaKnown RBP12.99□□□□□ -0.33
IKBKB-216ENST00000520655 MYCLP12524 364 aaPredicted RBP12.99□□□□□ -0.33
IKBKB-216ENST00000520655 CALML3P27482 149 aa12.99□□□□□ -0.33
IKBKB-216ENST00000520655 TMEM179Q6ZVK1 233 aa12.99□□□□□ -0.33
IKBKB-216ENST00000520655 SH3BP5LQ7L8J4 393 aa12.99□□□□□ -0.33
IKBKB-216ENST00000520655 RRAGCQ9HB90 399 aa12.99□□□□□ -0.33
IKBKB-216ENST00000520655 SBF2Q86WG5 1849 aa12.99□□□□□ -0.33
IKBKB-216ENST00000520655 NDUFB10O96000 172 aa12.99□□□□□ -0.33
IKBKB-216ENST00000520655 TXKP42681 527 aa12.99□□□□□ -0.33
IKBKB-216ENST00000520655 TROAPQ12815 778 aa12.99□□□□□ -0.33
IKBKB-216ENST00000520655 DHX58Q96C10 678 aa12.99□□□□□ -0.33
IKBKB-216ENST00000520655 LMBRD1Q9NUN5 540 aa12.99□□□□□ -0.33
IKBKB-216ENST00000520655 TMOD4Q9NZQ9 345 aa12.99□□□□□ -0.33
IKBKB-216ENST00000520655 TNRC6CQ9HCJ0 1690 aaKnown RBP12.99□□□□□ -0.33
IKBKB-216ENST00000520655 GAKO14976 1311 aa12.99□□□□□ -0.33
IKBKB-216ENST00000520655 FMNL1O95466 1100 aaPredicted RBP12.99□□□□□ -0.33
IKBKB-216ENST00000520655 ANO1Q5XXA6 986 aa12.99□□□□□ -0.33
IKBKB-216ENST00000520655 CCDC43Q96MW1 224 aaKnown RBP12.99□□□□□ -0.33
IKBKB-216ENST00000520655 WNK3Q9BYP7 1800 aa12.98□□□□□ -0.33
IKBKB-216ENST00000520655 SPDYE3A6NKU9 549 aa12.98□□□□□ -0.33
IKBKB-216ENST00000520655 DDAH1O94760 285 aa12.98□□□□□ -0.33
IKBKB-216ENST00000520655 KCNB2Q92953 911 aa12.98□□□□□ -0.33
IKBKB-216ENST00000520655 SAMM50Q9Y512 469 aa12.98□□□□□ -0.33
IKBKB-216ENST00000520655 VGLL3A8MV65 326 aa12.98□□□□□ -0.33
IKBKB-216ENST00000520655 PTMSP20962 102 aa12.98□□□□□ -0.33
IKBKB-216ENST00000520655 IBSPP21815 317 aaPredicted RBP12.98□□□□□ -0.33
IKBKB-216ENST00000520655 CCDC148Q8NFR7 591 aa12.98□□□□□ -0.33
IKBKB-216ENST00000520655 GJA10Q969M2 543 aa12.98□□□□□ -0.33
IKBKB-216ENST00000520655 MYH13Q9UKX3 1938 aa12.98□□□□□ -0.33
IKBKB-216ENST00000520655 SPDYE4A6NLX3 237 aa12.98□□□□□ -0.33
IKBKB-216ENST00000520655 PEX10O60683 326 aa12.98□□□□□ -0.33
IKBKB-216ENST00000520655 ASNSP08243 561 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms