RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 USP32Q8NFA0 1604 aa11.27□□□□□ -0.61
PDGFRB-207ENST00000520579 OPLAHO14841 1288 aa11.27□□□□□ -0.61
PDGFRB-207ENST00000520579 ZAP70P43403 619 aa11.27□□□□□ -0.61
PDGFRB-207ENST00000520579 KRT31Q15323 416 aa11.27□□□□□ -0.61
PDGFRB-207ENST00000520579 RESP18Q5W5W9 173 aa11.27□□□□□ -0.61
PDGFRB-207ENST00000520579 CYB5R4Q7L1T6 521 aa11.27□□□□□ -0.61
PDGFRB-207ENST00000520579 CNGA4Q8IV77 575 aa11.27□□□□□ -0.61
PDGFRB-207ENST00000520579 TSEN2Q8NCE0 465 aaKnown RBP11.27□□□□□ -0.61
PDGFRB-207ENST00000520579 LACRTQ9GZZ8 138 aa11.27□□□□□ -0.61
PDGFRB-207ENST00000520579 HAUS2Q9NVX0 235 aa11.27□□□□□ -0.61
PDGFRB-207ENST00000520579 RBM47A0AV96 593 aaKnown RBP11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 CDKL5O76039 1030 aa11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 SSRP1Q08945 709 aaKnown RBP11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 PPFIA1Q13136 1202 aa11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 NNTQ13423 1086 aa11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 SCARF1Q14162 830 aa11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 MLKLQ8NB16 471 aa11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 HNRNPLLQ8WVV9 542 aaKnown RBP11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 ARHGEF1Q92888 912 aaKnown RBP11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 MS4A14Q96JA4 679 aa11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 SLC12A7Q9Y666 1083 aa11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 CSB-PGBD3P0DP91 1061 aa11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 DPYDQ12882 1025 aa11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 NFRKBQ6P4R8 1299 aa11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 CYP26C1Q6V0L0 522 aa11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 ANKRD13DQ6ZTN6 518 aa11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 MAEAQ7L5Y9 396 aa11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 TMC4Q7Z404 712 aa11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 HELBQ8NG08 1087 aaPredicted RBP11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 TSPYL2Q9H2G4 693 aaPredicted RBP11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 FRMPD1Q5SYB0 1578 aa11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 AGPSO00116 658 aa11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 GPAA1O43292 621 aa11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 PRPF6O94906 941 aaKnown RBP11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 PLCD1P51178 756 aa11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 CFAP58Q5T655 872 aa11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 KLHL7Q8IXQ5 586 aa11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 NLRP3Q96P20 1036 aa11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 ABHD10Q9NUJ1 306 aa11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 NFU1Q9UMS0 254 aa11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 RIPOR2Q9Y4F9 1068 aa11.26□□□□□ -0.61
PDGFRB-207ENST00000520579 CEP170BQ9Y4F5 1589 aaPredicted RBP11.25□□□□□ -0.61
PDGFRB-207ENST00000520579 EIF3HO15372 352 aaKnown RBP eCLIP11.25□□□□□ -0.61
PDGFRB-207ENST00000520579 NDUFA10O95299 355 aa11.25□□□□□ -0.61
PDGFRB-207ENST00000520579 CCDC121Q6ZUS5 278 aa11.25□□□□□ -0.61
PDGFRB-207ENST00000520579 ARHGEF25Q86VW2 580 aa11.25□□□□□ -0.61
PDGFRB-207ENST00000520579 POTEDQ86YR6 584 aa11.25□□□□□ -0.61
PDGFRB-207ENST00000520579 ENOX1Q8TC92 643 aaKnown RBP11.25□□□□□ -0.61
PDGFRB-207ENST00000520579 RNPC3Q96LT9 517 aaKnown RBP11.25□□□□□ -0.61
PDGFRB-207ENST00000520579 TSPAN18Q96SJ8 248 aa11.25□□□□□ -0.61
PDGFRB-207ENST00000520579 IQSEC3Q9UPP2 1182 aaPredicted RBP11.25□□□□□ -0.61
PDGFRB-207ENST00000520579 LUC7L2Q9Y383 392 aaKnown RBP11.25□□□□□ -0.61
PDGFRB-207ENST00000520579 IGSF1Q8N6C5 1336 aa11.25□□□□□ -0.61
PDGFRB-207ENST00000520579 MOCS3O95396 460 aa11.25□□□□□ -0.61
PDGFRB-207ENST00000520579 ARHGAP25P42331 645 aa11.25□□□□□ -0.61
PDGFRB-207ENST00000520579 MECOMQ03112 1051 aa11.25□□□□□ -0.61
PDGFRB-207ENST00000520579 CRYMQ14894 314 aa11.25□□□□□ -0.61
PDGFRB-207ENST00000520579 TMTC1Q8IUR5 882 aa11.25□□□□□ -0.61
PDGFRB-207ENST00000520579 ZKSCAN4Q969J2 545 aaPredicted RBP11.25□□□□□ -0.61
PDGFRB-207ENST00000520579 BICD1Q96G01 975 aa11.25□□□□□ -0.61
PDGFRB-207ENST00000520579 TTC26A0AVF1 554 aa11.25□□□□□ -0.61
PDGFRB-207ENST00000520579 MINDY4BA8MYZ0 360 aa11.25□□□□□ -0.61
PDGFRB-207ENST00000520579 EZRP15311 586 aaKnown RBP11.25□□□□□ -0.61
PDGFRB-207ENST00000520579 PTPAQ15257 358 aa11.25□□□□□ -0.61
PDGFRB-207ENST00000520579 CCDC40Q4G0X9 1142 aa11.25□□□□□ -0.61
PDGFRB-207ENST00000520579 TYW1BQ6NUM6 668 aa11.25□□□□□ -0.61
PDGFRB-207ENST00000520579 UHMK1Q8TAS1 419 aaKnown RBP11.25□□□□□ -0.61
PDGFRB-207ENST00000520579 CEP126Q9P2H0 1117 aa11.25□□□□□ -0.61
PDGFRB-207ENST00000520579 NEO1Q92859 1461 aa11.25□□□□□ -0.61
PDGFRB-207ENST00000520579 ANKRD18BA2A2Z9 1011 aa11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 TMOD1P28289 359 aa11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 ZC3H6P61129 1189 aaKnown RBP11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 TRADDQ15628 312 aa11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 TCP11Q8WWU5 503 aa11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 UIMC1Q96RL1 719 aa11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 MTRQ99707 1265 aa11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 YIPF3Q9GZM5 350 aa11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 LRWD1Q9UFC0 647 aa11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 PACSIN2Q9UNF0 486 aaPredicted RBP11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 SLC4A4Q9Y6R1 1079 aa11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 SNAP23O00161 211 aa11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 PLEKP08567 350 aaPredicted RBP11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 COPB1P53618 953 aaKnown RBP11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 GUCY2DQ02846 1103 aa11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 ZMYM1Q5SVZ6 1142 aa11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 SPATA1Q5VX52 437 aa11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 NELFBQ8WX92 580 aa11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 SYMPKQ92797 1274 aaKnown RBP11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 TRIM47Q96LD4 638 aa11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 PANX2Q96RD6 677 aa11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 TRIM31Q9BZY9 425 aa11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 CCDC113Q9H0I3 377 aa11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 KLC4Q9NSK0 619 aa11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 A0A087X0B3 334 aa11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 RCCD1A6NED2 376 aa11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 CLTAP09496 248 aa11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 CCNI2Q6ZMN8 369 aaPredicted RBP11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 RASGRP2Q7LDG7 609 aa11.24□□□□□ -0.61
PDGFRB-207ENST00000520579 TBC1D10CQ8IV04 446 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms