RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 RASGRP2Q7LDG7 609 aa13.93□□□□□ -0.18
HPS4-218ENST00000519774 FBXO28Q9NVF7 368 aa13.93□□□□□ -0.18
HPS4-218ENST00000519774 RLFQ13129 1914 aa13.93□□□□□ -0.18
HPS4-218ENST00000519774 BMP3P12645 472 aa13.92□□□□□ -0.18
HPS4-218ENST00000519774 ZKSCAN1P17029 563 aaPredicted RBP13.92□□□□□ -0.18
HPS4-218ENST00000519774 MCCP23508 829 aa13.92□□□□□ -0.18
HPS4-218ENST00000519774 SLC1A4P43007 532 aa13.92□□□□□ -0.18
HPS4-218ENST00000519774 NOVP48745 357 aa13.92□□□□□ -0.18
HPS4-218ENST00000519774 COG2Q14746 738 aa13.92□□□□□ -0.18
HPS4-218ENST00000519774 KIF22Q14807 665 aa13.92□□□□□ -0.18
HPS4-218ENST00000519774 FAM110CQ1W6H9 321 aa13.92□□□□□ -0.18
HPS4-218ENST00000519774 COL13A1Q5TAT6 717 aaPredicted RBP13.92□□□□□ -0.18
HPS4-218ENST00000519774 CHST3Q7LGC8 479 aa13.92□□□□□ -0.18
HPS4-218ENST00000519774 MB21D2Q8IYB1 491 aaPredicted RBP13.92□□□□□ -0.18
HPS4-218ENST00000519774 ENAHQ8N8S7 591 aaPredicted RBP13.92□□□□□ -0.18
HPS4-218ENST00000519774 GTF3C2Q8WUA4 911 aaPredicted RBP13.92□□□□□ -0.18
HPS4-218ENST00000519774 ATG4CQ96DT6 458 aa13.92□□□□□ -0.18
HPS4-218ENST00000519774 ARHGAP39Q9C0H5 1083 aa13.92□□□□□ -0.18
HPS4-218ENST00000519774 KAT14Q9H8E8 782 aa13.92□□□□□ -0.18
HPS4-218ENST00000519774 A0A0G2JMZ2 1700 aa13.92□□□□□ -0.18
HPS4-218ENST00000519774 MGAMO43451 1857 aa13.91□□□□□ -0.18
HPS4-218ENST00000519774 IFIT3O14879 490 aaKnown RBP13.91□□□□□ -0.18
HPS4-218ENST00000519774 ANTXR2P58335 489 aa13.91□□□□□ -0.18
HPS4-218ENST00000519774 LACTBP83111 547 aaPredicted RBP13.91□□□□□ -0.18
HPS4-218ENST00000519774 IKQ13123 557 aaPredicted RBP13.91□□□□□ -0.18
HPS4-218ENST00000519774 IFIT1BQ5T764 474 aaKnown RBP13.91□□□□□ -0.18
HPS4-218ENST00000519774 KCTD1Q719H9 257 aa13.91□□□□□ -0.18
HPS4-218ENST00000519774 CTU1Q7Z7A3 348 aaKnown RBP13.91□□□□□ -0.18
HPS4-218ENST00000519774 DGKHQ86XP1 1220 aa13.91□□□□□ -0.18
HPS4-218ENST00000519774 RASEFQ8IZ41 740 aa13.91□□□□□ -0.18
HPS4-218ENST00000519774 GMCL1Q96IK5 515 aa13.91□□□□□ -0.18
HPS4-218ENST00000519774 TTC14Q96N46 770 aa13.91□□□□□ -0.18
HPS4-218ENST00000519774 TXNRD2Q9NNW7 524 aa13.91□□□□□ -0.18
HPS4-218ENST00000519774 RBPJLQ9UBG7 517 aa13.91□□□□□ -0.18
HPS4-218ENST00000519774 FRMPD2Q68DX3 1309 aaPredicted RBP13.9□□□□□ -0.18
HPS4-218ENST00000519774 COL11A1P12107 1806 aaPredicted RBP13.9□□□□□ -0.18
HPS4-218ENST00000519774 ERICH2A1L162 156 aa13.9□□□□□ -0.18
HPS4-218ENST00000519774 TMEM232C9JQI7 657 aa13.9□□□□□ -0.18
HPS4-218ENST00000519774 PRC1O43663 620 aa13.9□□□□□ -0.18
HPS4-218ENST00000519774 FMNL1O95466 1100 aaPredicted RBP13.9□□□□□ -0.18
HPS4-218ENST00000519774 HSPA4P34932 840 aa13.9□□□□□ -0.18
HPS4-218ENST00000519774 PSMC4P43686 418 aa13.9□□□□□ -0.18
HPS4-218ENST00000519774 ERVK-9P63128 1117 aa13.9□□□□□ -0.18
HPS4-218ENST00000519774 ERVK-24P63145 666 aa13.9□□□□□ -0.18
HPS4-218ENST00000519774 CAP1Q01518 475 aa13.9□□□□□ -0.18
HPS4-218ENST00000519774 SART3Q15020 963 aaKnown RBP13.9□□□□□ -0.18
HPS4-218ENST00000519774 TMEM67Q5HYA8 995 aa13.9□□□□□ -0.18
HPS4-218ENST00000519774 PNMA1Q8ND90 353 aa13.9□□□□□ -0.18
HPS4-218ENST00000519774 GPRC5AQ8NFJ5 357 aa13.9□□□□□ -0.18
HPS4-218ENST00000519774 DCAF4Q8WV16 495 aa13.9□□□□□ -0.18
HPS4-218ENST00000519774 SLF1Q9BQI6 1058 aa13.9□□□□□ -0.18
HPS4-218ENST00000519774 EFCC1Q9HA90 598 aa13.9□□□□□ -0.18
HPS4-218ENST00000519774 HOXC10Q9NYD6 342 aa13.9□□□□□ -0.18
HPS4-218ENST00000519774 MORF4L1Q9UBU8 362 aa13.9□□□□□ -0.18
HPS4-218ENST00000519774 PPP1R9AQ9ULJ8 1098 aa13.9□□□□□ -0.18
HPS4-218ENST00000519774 RABGAP1Q9Y3P9 1069 aa13.9□□□□□ -0.18
HPS4-218ENST00000519774 TRIM17Q9Y577 477 aa13.9□□□□□ -0.18
HPS4-218ENST00000519774 MYPNQ86TC9 1320 aa13.9□□□□□ -0.19
HPS4-218ENST00000519774 CNMDO75829 334 aa13.89□□□□□ -0.19
HPS4-218ENST00000519774 CTGFP29279 349 aa13.89□□□□□ -0.19
HPS4-218ENST00000519774 MCM5P33992 734 aa13.89□□□□□ -0.19
HPS4-218ENST00000519774 FCGRTP55899 365 aa13.89□□□□□ -0.19
HPS4-218ENST00000519774 COL9A3Q14050 684 aaPredicted RBP13.89□□□□□ -0.19
HPS4-218ENST00000519774 KRT32Q14532 448 aa13.89□□□□□ -0.19
HPS4-218ENST00000519774 PLS1Q14651 629 aa13.89□□□□□ -0.19
HPS4-218ENST00000519774 WTAPQ15007 396 aa13.89□□□□□ -0.19
HPS4-218ENST00000519774 ARHGEF6Q15052 776 aa13.89□□□□□ -0.19
HPS4-218ENST00000519774 SEC23AQ15436 765 aa13.89□□□□□ -0.19
HPS4-218ENST00000519774 ADCK5Q3MIX3 580 aa13.89□□□□□ -0.19
HPS4-218ENST00000519774 POTEEQ6S8J3 1075 aa13.89□□□□□ -0.19
HPS4-218ENST00000519774 LBX2Q6XYB7 198 aa13.89□□□□□ -0.19
HPS4-218ENST00000519774 OTOP1Q7RTM1 612 aa13.89□□□□□ -0.19
HPS4-218ENST00000519774 KIFC2Q96AC6 838 aa13.89□□□□□ -0.19
HPS4-218ENST00000519774 TRIM47Q96LD4 638 aa13.89□□□□□ -0.19
HPS4-218ENST00000519774 NEK1Q96PY6 1258 aa13.89□□□□□ -0.19
HPS4-218ENST00000519774 GPCPD1Q9NPB8 672 aa13.89□□□□□ -0.19
HPS4-218ENST00000519774 BTBD7Q9P203 1132 aa13.89□□□□□ -0.19
HPS4-218ENST00000519774 FEM1BQ9UK73 627 aa13.89□□□□□ -0.19
HPS4-218ENST00000519774 TNPO2O14787 897 aaKnown RBP13.88□□□□□ -0.19
HPS4-218ENST00000519774 PDHBP11177 359 aa13.88□□□□□ -0.19
HPS4-218ENST00000519774 STAT2P52630 851 aa13.88□□□□□ -0.19
HPS4-218ENST00000519774 Q3C1V9 767 aa13.88□□□□□ -0.19
HPS4-218ENST00000519774 WDR78Q5VTH9 848 aa13.88□□□□□ -0.19
HPS4-218ENST00000519774 CCAR1Q8IX12 1150 aaKnown RBP13.88□□□□□ -0.19
HPS4-218ENST00000519774 ANKS1AQ92625 1134 aa13.88□□□□□ -0.19
HPS4-218ENST00000519774 JAKMIP1Q96N16 626 aaKnown RBP13.88□□□□□ -0.19
HPS4-218ENST00000519774 USP26Q9BXU7 913 aa13.88□□□□□ -0.19
HPS4-218ENST00000519774 LRRC2Q9BYS8 371 aa13.88□□□□□ -0.19
HPS4-218ENST00000519774 SENP2Q9HC62 589 aa13.88□□□□□ -0.19
HPS4-218ENST00000519774 CWC22Q9HCG8 908 aaKnown RBP13.88□□□□□ -0.19
HPS4-218ENST00000519774 CTDP1Q9Y5B0 961 aaPredicted RBP13.88□□□□□ -0.19
HPS4-218ENST00000519774 SNX14Q9Y5W7 946 aa13.88□□□□□ -0.19
HPS4-218ENST00000519774 VWA5AO00534 786 aa13.87□□□□□ -0.19
HPS4-218ENST00000519774 EPB41L2O43491 1005 aaKnown RBP13.87□□□□□ -0.19
HPS4-218ENST00000519774 GOLGA8HP0CJ92 632 aa13.87□□□□□ -0.19
HPS4-218ENST00000519774 CCNA1P78396 465 aa13.87□□□□□ -0.19
HPS4-218ENST00000519774 TSGA10IPQ3SY00 556 aa13.87□□□□□ -0.19
HPS4-218ENST00000519774 TTBK2Q6IQ55 1244 aa13.87□□□□□ -0.19
HPS4-218ENST00000519774 FAM160B2Q86V87 743 aa13.87□□□□□ -0.19
HPS4-218ENST00000519774 MB21D1Q8N884 522 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms