RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 MAP6Q96JE9 813 aa3.49□□□□□ -1.85
CCNC-208ENST00000519617 EPB41L4AQ9HCS5 686 aaPredicted RBP3.49□□□□□ -1.85
CCNC-208ENST00000519617 SIRT5Q9NXA8 310 aa3.49□□□□□ -1.85
CCNC-208ENST00000519617 REV1Q9UBZ9 1251 aa3.49□□□□□ -1.85
CCNC-208ENST00000519617 SLC22A31A6NKX4 558 aa3.48□□□□□ -1.85
CCNC-208ENST00000519617 IRS4O14654 1257 aaPredicted RBP3.48□□□□□ -1.85
CCNC-208ENST00000519617 BPNT1O95861 308 aa3.48□□□□□ -1.85
CCNC-208ENST00000519617 CELA3BP08861 270 aa3.48□□□□□ -1.85
CCNC-208ENST00000519617 PNLIPP16233 465 aa3.48□□□□□ -1.85
CCNC-208ENST00000519617 RPL10P27635 214 aaKnown RBP3.48□□□□□ -1.85
CCNC-208ENST00000519617 VIPR1P32241 457 aa3.48□□□□□ -1.85
CCNC-208ENST00000519617 EPHB3P54753 998 aa3.48□□□□□ -1.85
CCNC-208ENST00000519617 NFKB2Q00653 900 aa3.48□□□□□ -1.85
CCNC-208ENST00000519617 LMNB2Q03252 620 aa3.48□□□□□ -1.85
CCNC-208ENST00000519617 NMIQ13287 307 aaPredicted RBP3.48□□□□□ -1.85
CCNC-208ENST00000519617 CAMK2GQ13555 558 aaPredicted RBP3.48□□□□□ -1.85
CCNC-208ENST00000519617 TAF1CQ15572 869 aaPredicted RBP3.48□□□□□ -1.85
CCNC-208ENST00000519617 SLC14A2Q15849 920 aa3.48□□□□□ -1.85
CCNC-208ENST00000519617 BNC2Q6ZN30 1099 aaPredicted RBP3.48□□□□□ -1.85
CCNC-208ENST00000519617 GATAD2BQ8WXI9 593 aa3.48□□□□□ -1.85
CCNC-208ENST00000519617 DUSP9Q99956 384 aaKnown RBP3.48□□□□□ -1.85
CCNC-208ENST00000519617 HDAC8Q9BY41 377 aa3.48□□□□□ -1.85
CCNC-208ENST00000519617 RNF19AQ9NV58 838 aa3.48□□□□□ -1.85
CCNC-208ENST00000519617 IVNS1ABPQ9Y6Y0 642 aa3.48□□□□□ -1.85
CCNC-208ENST00000519617 ABLIM1O14639 778 aa3.47□□□□□ -1.85
CCNC-208ENST00000519617 USP2O75604 605 aaPredicted RBP3.47□□□□□ -1.85
CCNC-208ENST00000519617 F13A1P00488 732 aa3.47□□□□□ -1.85
CCNC-208ENST00000519617 ERVFRD-1P60508 538 aa3.47□□□□□ -1.85
CCNC-208ENST00000519617 ERICH6BQ5W0A0 696 aa3.47□□□□□ -1.85
CCNC-208ENST00000519617 OLFML2BQ68BL8 750 aa3.47□□□□□ -1.85
CCNC-208ENST00000519617 CEP128Q6ZU80 1094 aa3.47□□□□□ -1.85
CCNC-208ENST00000519617 WAPLQ7Z5K2 1190 aa3.47□□□□□ -1.85
CCNC-208ENST00000519617 PRRT2Q7Z6L0 340 aaPredicted RBP3.47□□□□□ -1.85
CCNC-208ENST00000519617 GGNQ86UU5 652 aa3.47□□□□□ -1.85
CCNC-208ENST00000519617 TMEFF1Q8IYR6 380 aa3.47□□□□□ -1.85
CCNC-208ENST00000519617 ZNF655Q8N720 491 aaPredicted RBP3.47□□□□□ -1.85
CCNC-208ENST00000519617 LINC00116Q8NCU8 138 aa3.47□□□□□ -1.85
CCNC-208ENST00000519617 MZB1Q8WU39 189 aa3.47□□□□□ -1.85
CCNC-208ENST00000519617 TCTN2Q96GX1 697 aa3.47□□□□□ -1.85
CCNC-208ENST00000519617 HHIPL1Q96JK4 782 aa3.47□□□□□ -1.85
CCNC-208ENST00000519617 KIF2CQ99661 725 aa3.47□□□□□ -1.85
CCNC-208ENST00000519617 FOXP3Q9BZS1 431 aa3.47□□□□□ -1.85
CCNC-208ENST00000519617 ASCC2Q9H1I8 757 aaPredicted RBP3.47□□□□□ -1.85
CCNC-208ENST00000519617 ZMYM5Q9UJ78 669 aa3.47□□□□□ -1.85
CCNC-208ENST00000519617 POLR3KQ9Y2Y1 108 aaPredicted RBP3.47□□□□□ -1.85
CCNC-208ENST00000519617 USP31Q70CQ4 1352 aa3.47□□□□□ -1.85
CCNC-208ENST00000519617 TMEM82A0PJX8 343 aa3.46□□□□□ -1.86
CCNC-208ENST00000519617 RGS13O14921 159 aa3.46□□□□□ -1.86
CCNC-208ENST00000519617 DNAJA2O60884 412 aa3.46□□□□□ -1.86
CCNC-208ENST00000519617 HTR3BO95264 441 aa3.46□□□□□ -1.86
CCNC-208ENST00000519617 PF4P02776 101 aa3.46□□□□□ -1.86
CCNC-208ENST00000519617 CDR1P51861 262 aa3.46□□□□□ -1.86
CCNC-208ENST00000519617 PCBP3P57721 371 aaKnown RBP3.46□□□□□ -1.86
CCNC-208ENST00000519617 RNF4P78317 190 aa3.46□□□□□ -1.86
CCNC-208ENST00000519617 KCNA1Q09470 495 aa3.46□□□□□ -1.86
CCNC-208ENST00000519617 CNKSR3Q6P9H4 555 aa3.46□□□□□ -1.86
CCNC-208ENST00000519617 FAM129CQ86XR2 697 aa3.46□□□□□ -1.86
CCNC-208ENST00000519617 SP8Q8IXZ3 490 aa3.46□□□□□ -1.86
CCNC-208ENST00000519617 PHACTR4Q8IZ21 702 aa3.46□□□□□ -1.86
CCNC-208ENST00000519617 FEZF2Q8TBJ5 459 aa3.46□□□□□ -1.86
CCNC-208ENST00000519617 TEPSINQ96N21 525 aa3.46□□□□□ -1.86
CCNC-208ENST00000519617 LUC7LQ9NQ29 371 aaKnown RBP3.46□□□□□ -1.86
CCNC-208ENST00000519617 KLHL3Q9UH77 587 aa3.46□□□□□ -1.86
CCNC-208ENST00000519617 TCFL5Q9UL49 500 aa3.46□□□□□ -1.86
CCNC-208ENST00000519617 SSU72P8A0A1W2PR75 194 aa3.45□□□□□ -1.86
CCNC-208ENST00000519617 FADS2P1A8MWK0 482 aa3.45□□□□□ -1.86
CCNC-208ENST00000519617 MPOP05164 745 aa3.45□□□□□ -1.86
CCNC-208ENST00000519617 ADRB1P08588 477 aa3.45□□□□□ -1.86
CCNC-208ENST00000519617 SDHBP21912 280 aa3.45□□□□□ -1.86
CCNC-208ENST00000519617 GBP1P32455 592 aa3.45□□□□□ -1.86
CCNC-208ENST00000519617 RTP1P59025 263 aa3.45□□□□□ -1.86
CCNC-208ENST00000519617 DAB2P98082 770 aa3.45□□□□□ -1.86
CCNC-208ENST00000519617 CAP1Q01518 475 aa3.45□□□□□ -1.86
CCNC-208ENST00000519617 VMACQ2NL98 169 aa3.45□□□□□ -1.86
CCNC-208ENST00000519617 NBPF9Q3BBW0 867 aa3.45□□□□□ -1.86
CCNC-208ENST00000519617 BBS9Q3SYG4 887 aa3.45□□□□□ -1.86
CCNC-208ENST00000519617 EAPPQ56P03 285 aaPredicted RBP3.45□□□□□ -1.86
CCNC-208ENST00000519617 NBPF12Q5TAG4 269 aaPredicted RBP3.45□□□□□ -1.86
CCNC-208ENST00000519617 LDHDQ86WU2 507 aa3.45□□□□□ -1.86
CCNC-208ENST00000519617 IGDCC3Q8IVU1 814 aa3.45□□□□□ -1.86
CCNC-208ENST00000519617 LINC01356Q8N9X3 169 aa3.45□□□□□ -1.86
CCNC-208ENST00000519617 BORCS6Q96GS4 357 aa3.45□□□□□ -1.86
CCNC-208ENST00000519617 RHOVQ96L33 236 aa3.45□□□□□ -1.86
CCNC-208ENST00000519617 PLCD4Q9BRC7 762 aa3.45□□□□□ -1.86
CCNC-208ENST00000519617 RSRP1Q9BUV0 290 aa3.45□□□□□ -1.86
CCNC-208ENST00000519617 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.45□□□□□ -1.86
CCNC-208ENST00000519617 KLHL14Q9P2G3 628 aa3.45□□□□□ -1.86
CCNC-208ENST00000519617 TNFRSF10DQ9UBN6 386 aa3.45□□□□□ -1.86
CCNC-208ENST00000519617 PARP2Q9UGN5 583 aa3.45□□□□□ -1.86
CCNC-208ENST00000519617 ZC3H12DA2A288 527 aaKnown RBP3.44□□□□□ -1.86
CCNC-208ENST00000519617 WTIPA6NIX2 430 aaPredicted RBP3.44□□□□□ -1.86
CCNC-208ENST00000519617 GRIN3BO60391 1043 aa3.44□□□□□ -1.86
CCNC-208ENST00000519617 UBOX5O94941 541 aa3.44□□□□□ -1.86
CCNC-208ENST00000519617 SYPP08247 313 aa3.44□□□□□ -1.86
CCNC-208ENST00000519617 CTSHP09668 335 aa3.44□□□□□ -1.86
CCNC-208ENST00000519617 CHMP4BP1P59074 171 aa3.44□□□□□ -1.86
CCNC-208ENST00000519617 TMEM62Q0P6H9 643 aa3.44□□□□□ -1.86
CCNC-208ENST00000519617 EFEMP1Q12805 493 aa3.44□□□□□ -1.86
CCNC-208ENST00000519617 LAPTM5Q13571 262 aa3.44□□□□□ -1.86
CCNC-208ENST00000519617 MPP2Q14168 576 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms