RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 EEF2P13639 858 aaKnown RBP16.74■□□□□ 0.27
CLN8-204ENST00000519254 VEGFAP15692 232 aaPredicted RBP16.74■□□□□ 0.27
CLN8-204ENST00000519254 CAP2P40123 477 aa16.74■□□□□ 0.27
CLN8-204ENST00000519254 MAP3K10Q02779 954 aa16.74■□□□□ 0.27
CLN8-204ENST00000519254 FUT2Q10981 343 aa16.74■□□□□ 0.27
CLN8-204ENST00000519254 SUPT20HL1Q3ZLR7 823 aa16.74■□□□□ 0.27
CLN8-204ENST00000519254 RASGRP2Q7LDG7 609 aa16.74■□□□□ 0.27
CLN8-204ENST00000519254 BRAPQ7Z569 592 aa16.74■□□□□ 0.27
CLN8-204ENST00000519254 CCDC82Q8N4S0 544 aa16.74■□□□□ 0.27
CLN8-204ENST00000519254 CTCFLQ8NI51 663 aaPredicted RBP16.74■□□□□ 0.27
CLN8-204ENST00000519254 ZNF341Q9BYN7 854 aa16.74■□□□□ 0.27
CLN8-204ENST00000519254 SSC5DA1L4H1 1573 aa16.74■□□□□ 0.27
CLN8-204ENST00000519254 PHF20L1A8MW92 1017 aa16.74■□□□□ 0.27
CLN8-204ENST00000519254 RAD21O60216 631 aa16.74■□□□□ 0.27
CLN8-204ENST00000519254 CEBPZQ03701 1054 aaKnown RBP16.74■□□□□ 0.27
CLN8-204ENST00000519254 CCDC183Q5T5S1 534 aa16.74■□□□□ 0.27
CLN8-204ENST00000519254 LRSAM1Q6UWE0 723 aa16.74■□□□□ 0.27
CLN8-204ENST00000519254 TRIM22Q8IYM9 498 aa16.74■□□□□ 0.27
CLN8-204ENST00000519254 WASF1Q92558 559 aa16.74■□□□□ 0.27
CLN8-204ENST00000519254 GLIS2Q9BZE0 524 aaPredicted RBP16.74■□□□□ 0.27
CLN8-204ENST00000519254 NMRK2Q9NPI5 230 aa16.74■□□□□ 0.27
CLN8-204ENST00000519254 MYH4Q9Y623 1939 aa16.73■□□□□ 0.27
CLN8-204ENST00000519254 NOVP48745 357 aa16.73■□□□□ 0.27
CLN8-204ENST00000519254 PPP4R3BQ5MIZ7 849 aa16.73■□□□□ 0.27
CLN8-204ENST00000519254 WRNIP1Q96S55 665 aa16.73■□□□□ 0.27
CLN8-204ENST00000519254 RBM28Q9NW13 759 aaKnown RBP16.73■□□□□ 0.27
CLN8-204ENST00000519254 DEXIO95424 95 aa16.72■□□□□ 0.27
CLN8-204ENST00000519254 LIG1P18858 919 aa16.72■□□□□ 0.27
CLN8-204ENST00000519254 INPP5BP32019 993 aa16.72■□□□□ 0.27
CLN8-204ENST00000519254 MYSM1Q5VVJ2 828 aa16.72■□□□□ 0.27
CLN8-204ENST00000519254 MAP1SQ66K74 1059 aaPredicted RBP16.72■□□□□ 0.27
CLN8-204ENST00000519254 CCDC84Q86UT8 332 aaPredicted RBP16.72■□□□□ 0.27
CLN8-204ENST00000519254 CDCA5Q96FF9 252 aa16.72■□□□□ 0.27
CLN8-204ENST00000519254 RNF26Q9BY78 433 aaPredicted RBP16.72■□□□□ 0.27
CLN8-204ENST00000519254 RTEL1Q9NZ71 1219 aa16.72■□□□□ 0.27
CLN8-204ENST00000519254 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.72■□□□□ 0.27
CLN8-204ENST00000519254 ATAD5Q96QE3 1844 aa16.72■□□□□ 0.27
CLN8-204ENST00000519254 PLEKHA8P1O95397 391 aa16.72■□□□□ 0.27
CLN8-204ENST00000519254 TMTC3Q6ZXV5 915 aa16.72■□□□□ 0.27
CLN8-204ENST00000519254 NYAP2Q9P242 653 aa16.72■□□□□ 0.27
CLN8-204ENST00000519254 GOLGA6L4A6NEF3 574 aa16.71■□□□□ 0.27
CLN8-204ENST00000519254 USP17L5A8MUK1 530 aa16.71■□□□□ 0.27
CLN8-204ENST00000519254 CTNND1O60716 968 aaKnown RBP16.71■□□□□ 0.27
CLN8-204ENST00000519254 ASNSP08243 561 aa16.71■□□□□ 0.27
CLN8-204ENST00000519254 GOLGA8HP0CJ92 632 aa16.71■□□□□ 0.27
CLN8-204ENST00000519254 U2AF2P26368 475 aaKnown RBP eCLIP16.71■□□□□ 0.274e-7■■■■■ 30.7
CLN8-204ENST00000519254 KIF5BP33176 963 aa16.71■□□□□ 0.27
CLN8-204ENST00000519254 TRIM29Q14134 588 aa16.71■□□□□ 0.27
CLN8-204ENST00000519254 GRM4Q14833 912 aa16.71■□□□□ 0.27
CLN8-204ENST00000519254 PKN1Q16512 942 aa16.71■□□□□ 0.27
CLN8-204ENST00000519254 SIAH1Q8IUQ4 282 aa16.71■□□□□ 0.27
CLN8-204ENST00000519254 ZKSCAN4Q969J2 545 aaPredicted RBP16.71■□□□□ 0.27
CLN8-204ENST00000519254 ARHGEF10LQ9HCE6 1279 aa16.71■□□□□ 0.27
CLN8-204ENST00000519254 PRPF3O43395 683 aaKnown RBP16.7■□□□□ 0.26
CLN8-204ENST00000519254 NF2P35240 595 aa16.7■□□□□ 0.26
CLN8-204ENST00000519254 ECE1P42892 770 aa16.7■□□□□ 0.26
CLN8-204ENST00000519254 USP17L2Q6R6M4 530 aa16.7■□□□□ 0.26
CLN8-204ENST00000519254 STAG2Q8N3U4 1231 aa16.7■□□□□ 0.26
CLN8-204ENST00000519254 PANK2Q9BZ23 570 aa16.7■□□□□ 0.26
CLN8-204ENST00000519254 CLIC4Q9Y696 253 aa16.7■□□□□ 0.26
CLN8-204ENST00000519254 FRMPD2Q68DX3 1309 aaPredicted RBP16.7■□□□□ 0.26
CLN8-204ENST00000519254 MMP1P03956 469 aa16.69■□□□□ 0.26
CLN8-204ENST00000519254 PARP1P09874 1014 aaKnown RBP16.69■□□□□ 0.26
CLN8-204ENST00000519254 SRBD1Q8N5C6 995 aaKnown RBP16.69■□□□□ 0.26
CLN8-204ENST00000519254 ACER1Q8TDN7 264 aa16.69■□□□□ 0.26
CLN8-204ENST00000519254 SHISA4Q96DD7 197 aa16.69■□□□□ 0.26
CLN8-204ENST00000519254 POLR3EQ9NVU0 708 aa16.69■□□□□ 0.26
CLN8-204ENST00000519254 MAD2L2Q9UI95 211 aa16.69■□□□□ 0.26
CLN8-204ENST00000519254 DOCK1Q14185 1865 aa16.69■□□□□ 0.26
CLN8-204ENST00000519254 A0A1W2PRG0 241 aa16.69■□□□□ 0.26
CLN8-204ENST00000519254 PDHBP11177 359 aa16.69■□□□□ 0.26
CLN8-204ENST00000519254 NASPP49321 788 aaPredicted RBP16.69■□□□□ 0.26
CLN8-204ENST00000519254 TTLL12Q14166 644 aaPredicted RBP16.69■□□□□ 0.26
CLN8-204ENST00000519254 ZYXQ15942 572 aaKnown RBP16.69■□□□□ 0.26
CLN8-204ENST00000519254 CCDC96Q2M329 555 aa16.69■□□□□ 0.26
CLN8-204ENST00000519254 SCYL3Q8IZE3 742 aa16.69■□□□□ 0.26
CLN8-204ENST00000519254 LINC00301Q8NCQ3 95 aa16.69■□□□□ 0.26
CLN8-204ENST00000519254 PIBF1Q8WXW3 757 aa16.69■□□□□ 0.26
CLN8-204ENST00000519254 MKL1Q969V6 931 aa16.69■□□□□ 0.26
CLN8-204ENST00000519254 KLRG1Q96E93 195 aa16.69■□□□□ 0.26
CLN8-204ENST00000519254 MAP3K14Q99558 947 aa16.69■□□□□ 0.26
CLN8-204ENST00000519254 RBSNQ9H1K0 784 aa16.69■□□□□ 0.26
CLN8-204ENST00000519254 ZNF408Q9H9D4 720 aa16.69■□□□□ 0.26
CLN8-204ENST00000519254 ZNF112Q9UJU3 913 aa16.69■□□□□ 0.26
CLN8-204ENST00000519254 KCNJ14Q9UNX9 436 aa16.69■□□□□ 0.26
CLN8-204ENST00000519254 V9GY48 417 aaPredicted RBP16.69■□□□□ 0.26
CLN8-204ENST00000519254 CNTNAP5Q8WYK1 1306 aa16.69■□□□□ 0.26
CLN8-204ENST00000519254 TRAF5O00463 557 aa16.68■□□□□ 0.26
CLN8-204ENST00000519254 PPP1R12BO60237 982 aaPredicted RBP16.68■□□□□ 0.26
CLN8-204ENST00000519254 USP2O75604 605 aaPredicted RBP16.68■□□□□ 0.26
CLN8-204ENST00000519254 LETM1O95202 739 aaPredicted RBP16.68■□□□□ 0.26
CLN8-204ENST00000519254 FEZ1Q99689 392 aa16.68■□□□□ 0.26
CLN8-204ENST00000519254 GPCPD1Q9NPB8 672 aa16.68■□□□□ 0.26
CLN8-204ENST00000519254 PICK1Q9NRD5 415 aa16.68■□□□□ 0.26
CLN8-204ENST00000519254 hCG_1642624A0A1W2PR95 340 aa16.67■□□□□ 0.26
CLN8-204ENST00000519254 YEATS4O95619 227 aa16.67■□□□□ 0.26
CLN8-204ENST00000519254 AKAP17AQ02040 695 aaKnown RBP16.67■□□□□ 0.26
CLN8-204ENST00000519254 SLFN13Q68D06 897 aa16.67■□□□□ 0.26
CLN8-204ENST00000519254 LDHDQ86WU2 507 aa16.67■□□□□ 0.26
CLN8-204ENST00000519254 SPICE1Q8N0Z3 855 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms