RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 CDK8P49336 464 aa10.56□□□□□ -0.72
TRIM35-202ENST00000519219 EPHB4P54760 987 aa10.56□□□□□ -0.72
TRIM35-202ENST00000519219 SNX17Q15036 470 aa10.56□□□□□ -0.72
TRIM35-202ENST00000519219 C12orf60Q5U649 245 aa10.56□□□□□ -0.72
TRIM35-202ENST00000519219 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.56□□□□□ -0.72
TRIM35-202ENST00000519219 KIF1BPQ96EK5 621 aa10.56□□□□□ -0.72
TRIM35-202ENST00000519219 VCPKMTQ9H867 229 aa10.56□□□□□ -0.72
TRIM35-202ENST00000519219 PAG1Q9NWQ8 432 aa10.56□□□□□ -0.72
TRIM35-202ENST00000519219 USP17L12C9JPN9 530 aa10.55□□□□□ -0.72
TRIM35-202ENST00000519219 USP17L21D6R901 530 aa10.55□□□□□ -0.72
TRIM35-202ENST00000519219 STRNO43815 780 aa10.55□□□□□ -0.72
TRIM35-202ENST00000519219 PGK1P00558 417 aa10.55□□□□□ -0.72
TRIM35-202ENST00000519219 IFIT2P09913 472 aaKnown RBP10.55□□□□□ -0.72
TRIM35-202ENST00000519219 EEF2P13639 858 aaKnown RBP10.55□□□□□ -0.72
TRIM35-202ENST00000519219 IRX5P78411 483 aaPredicted RBP10.55□□□□□ -0.72
TRIM35-202ENST00000519219 FAM83BQ5T0W9 1011 aa10.55□□□□□ -0.72
TRIM35-202ENST00000519219 FAM109BQ6ICB4 259 aaPredicted RBP10.55□□□□□ -0.72
TRIM35-202ENST00000519219 TMED8Q6PL24 325 aaPredicted RBP10.55□□□□□ -0.72
TRIM35-202ENST00000519219 C16orf86Q6ZW13 317 aa10.55□□□□□ -0.72
TRIM35-202ENST00000519219 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.55□□□□□ -0.72
TRIM35-202ENST00000519219 STK11IPQ8N1F8 1099 aa10.55□□□□□ -0.72
TRIM35-202ENST00000519219 CLASRPQ8N2M8 674 aaKnown RBP10.55□□□□□ -0.72
TRIM35-202ENST00000519219 REPS2Q8NFH8 660 aa10.55□□□□□ -0.72
TRIM35-202ENST00000519219 NUP88Q99567 741 aaPredicted RBP10.55□□□□□ -0.72
TRIM35-202ENST00000519219 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.55□□□□□ -0.72
TRIM35-202ENST00000519219 TTYH1Q9H313 450 aaPredicted RBP10.55□□□□□ -0.72
TRIM35-202ENST00000519219 SWAP70Q9UH65 585 aa10.55□□□□□ -0.72
TRIM35-202ENST00000519219 COG6Q9Y2V7 657 aa10.55□□□□□ -0.72
TRIM35-202ENST00000519219 ZBED9Q6R2W3 1325 aa10.55□□□□□ -0.72
TRIM35-202ENST00000519219 WDR46O15213 610 aaKnown RBP10.54□□□□□ -0.72
TRIM35-202ENST00000519219 SMARCA5O60264 1052 aaPredicted RBP10.54□□□□□ -0.72
TRIM35-202ENST00000519219 FCER1AP12319 257 aa10.54□□□□□ -0.72
TRIM35-202ENST00000519219 TLE2Q04725 743 aa10.54□□□□□ -0.72
TRIM35-202ENST00000519219 ZNF792Q3KQV3 632 aa10.54□□□□□ -0.72
TRIM35-202ENST00000519219 HSP90AB4PQ58FF6 505 aa10.54□□□□□ -0.72
TRIM35-202ENST00000519219 CTR9Q6PD62 1173 aa10.54□□□□□ -0.72
TRIM35-202ENST00000519219 MB21D1Q8N884 522 aa10.54□□□□□ -0.72
TRIM35-202ENST00000519219 ARRDC4Q8NCT1 418 aa10.54□□□□□ -0.72
TRIM35-202ENST00000519219 MYLIPQ8WY64 445 aa10.54□□□□□ -0.72
TRIM35-202ENST00000519219 MMP19Q99542 508 aa10.54□□□□□ -0.72
TRIM35-202ENST00000519219 CDX2Q99626 313 aaPredicted RBP10.54□□□□□ -0.72
TRIM35-202ENST00000519219 PUS7LQ9H0K6 701 aaKnown RBP10.54□□□□□ -0.72
TRIM35-202ENST00000519219 MROH8Q9H579 483 aa10.54□□□□□ -0.72
TRIM35-202ENST00000519219 ARHGEF10LQ9HCE6 1279 aa10.54□□□□□ -0.72
TRIM35-202ENST00000519219 ZBTB40Q9NUA8 1239 aa10.54□□□□□ -0.72
TRIM35-202ENST00000519219 PRKAG2Q9UGJ0 569 aa10.54□□□□□ -0.72
TRIM35-202ENST00000519219 ZNF214Q9UL59 606 aaPredicted RBP10.54□□□□□ -0.72
TRIM35-202ENST00000519219 ADAMTS5Q9UNA0 930 aa10.54□□□□□ -0.72
TRIM35-202ENST00000519219 VWA5AO00534 786 aa10.53□□□□□ -0.72
TRIM35-202ENST00000519219 RAD21O60216 631 aa10.53□□□□□ -0.72
TRIM35-202ENST00000519219 ATP5JP18859 108 aa10.53□□□□□ -0.72
TRIM35-202ENST00000519219 ZNF697Q5TEC3 545 aa10.53□□□□□ -0.72
TRIM35-202ENST00000519219 RIOX2Q8IUF8 465 aa10.53□□□□□ -0.72
TRIM35-202ENST00000519219 ABRAQ8N0Z2 381 aa10.53□□□□□ -0.72
TRIM35-202ENST00000519219 HAUS7Q99871 368 aa10.53□□□□□ -0.72
TRIM35-202ENST00000519219 SEMA6BQ9H3T3 888 aa10.53□□□□□ -0.72
TRIM35-202ENST00000519219 XPNPEP3Q9NQH7 507 aa10.53□□□□□ -0.72
TRIM35-202ENST00000519219 ATP8A2Q9NTI2 1148 aa10.53□□□□□ -0.72
TRIM35-202ENST00000519219 PPP1R9AQ9ULJ8 1098 aa10.53□□□□□ -0.72
TRIM35-202ENST00000519219 PHF24Q9UPV7 400 aa10.53□□□□□ -0.72
TRIM35-202ENST00000519219 SLC4A4Q9Y6R1 1079 aa10.53□□□□□ -0.72
TRIM35-202ENST00000519219 CDH23Q9H251 3354 aa10.53□□□□□ -0.72
TRIM35-202ENST00000519219 GBF1Q92538 1859 aa10.53□□□□□ -0.72
TRIM35-202ENST00000519219 A0A1W2PQ45 241 aaPredicted RBP10.52□□□□□ -0.73
TRIM35-202ENST00000519219 A0A1W2PQY0 241 aa10.52□□□□□ -0.73
TRIM35-202ENST00000519219 MYADML2A6NDP7 307 aa10.52□□□□□ -0.73
TRIM35-202ENST00000519219 ADCY6O43306 1168 aa10.52□□□□□ -0.73
TRIM35-202ENST00000519219 ZNF865P0CJ78 1059 aaPredicted RBP10.52□□□□□ -0.73
TRIM35-202ENST00000519219 C20orf194Q5TEA3 1177 aa10.52□□□□□ -0.73
TRIM35-202ENST00000519219 TSHZ3Q63HK5 1081 aa10.52□□□□□ -0.73
TRIM35-202ENST00000519219 CCDC17Q96LX7 622 aa10.52□□□□□ -0.73
TRIM35-202ENST00000519219 TINF2Q9BSI4 451 aa10.52□□□□□ -0.73
TRIM35-202ENST00000519219 RIPK3Q9Y572 518 aa10.52□□□□□ -0.73
TRIM35-202ENST00000519219 LCTP09848 1927 aa10.52□□□□□ -0.73
TRIM35-202ENST00000519219 LRRC37A2A6NM11 1700 aa10.51□□□□□ -0.73
TRIM35-202ENST00000519219 PQBP1O60828 265 aaKnown RBP10.51□□□□□ -0.73
TRIM35-202ENST00000519219 RAB11FIP3O75154 756 aa10.51□□□□□ -0.73
TRIM35-202ENST00000519219 ADAMTS4O75173 837 aa10.51□□□□□ -0.73
TRIM35-202ENST00000519219 SLC25A27O95847 323 aa10.51□□□□□ -0.73
TRIM35-202ENST00000519219 SNAI1O95863 264 aaPredicted RBP10.51□□□□□ -0.73
TRIM35-202ENST00000519219 RARBP10826 455 aa10.51□□□□□ -0.73
TRIM35-202ENST00000519219 RASA1P20936 1047 aa10.51□□□□□ -0.73
TRIM35-202ENST00000519219 STAT3P40763 770 aa10.51□□□□□ -0.73
TRIM35-202ENST00000519219 RPAP2Q8IXW5 612 aaPredicted RBP10.51□□□□□ -0.73
TRIM35-202ENST00000519219 MAFAQ8NHW3 353 aaPredicted RBP10.51□□□□□ -0.73
TRIM35-202ENST00000519219 FGD4Q96M96 766 aa10.51□□□□□ -0.73
TRIM35-202ENST00000519219 SH2D4AQ9H788 454 aa10.51□□□□□ -0.73
TRIM35-202ENST00000519219 KANSL2Q9H9L4 492 aa10.51□□□□□ -0.73
TRIM35-202ENST00000519219 SLC5A4Q9NY91 659 aa10.51□□□□□ -0.73
TRIM35-202ENST00000519219 SYNRGQ9UMZ2 1314 aa10.51□□□□□ -0.73
TRIM35-202ENST00000519219 ROBO3Q96MS0 1386 aa10.51□□□□□ -0.73
TRIM35-202ENST00000519219 VCANP13611 3396 aa10.5□□□□□ -0.73
TRIM35-202ENST00000519219 HMMRO75330 724 aa10.5□□□□□ -0.73
TRIM35-202ENST00000519219 NDUFB10O96000 172 aa10.5□□□□□ -0.73
TRIM35-202ENST00000519219 CLTBP09497 229 aa10.5□□□□□ -0.73
TRIM35-202ENST00000519219 PTGS1P23219 599 aa10.5□□□□□ -0.73
TRIM35-202ENST00000519219 SLC4A3P48751 1232 aa10.5□□□□□ -0.73
TRIM35-202ENST00000519219 KCTD2Q14681 263 aa10.5□□□□□ -0.73
TRIM35-202ENST00000519219 UBE3CQ15386 1083 aa10.5□□□□□ -0.73
TRIM35-202ENST00000519219 C1orf53Q5VUE5 145 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms