RNA–Protein interactions for RNA: ENST00000518951.6

TOP1MT-206, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 5

Gene TOP1MT, Length 1,461 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-206ENST00000518951 CCDC69A6NI79 296 aa24.56■■□□□ 1.52
TOP1MT-206ENST00000518951 USP17L15C9J2P7 530 aa24.56■■□□□ 1.52
TOP1MT-206ENST00000518951 USP17L13C9JLJ4 530 aa24.56■■□□□ 1.52
TOP1MT-206ENST00000518951 USP17L11C9JVI0 530 aa24.56■■□□□ 1.52
TOP1MT-206ENST00000518951 USP17L18D6R9N7 530 aa24.56■■□□□ 1.52
TOP1MT-206ENST00000518951 USP17L22D6RA61 530 aa24.56■■□□□ 1.52
TOP1MT-206ENST00000518951 USP17L17D6RBQ6 530 aa24.56■■□□□ 1.52
TOP1MT-206ENST00000518951 USP17L19D6RCP7 530 aa24.56■■□□□ 1.52
TOP1MT-206ENST00000518951 USP17L20D6RJB6 530 aa24.56■■□□□ 1.52
TOP1MT-206ENST00000518951 BMP3P12645 472 aa24.56■■□□□ 1.52
TOP1MT-206ENST00000518951 FGD1P98174 961 aa24.56■■□□□ 1.52
TOP1MT-206ENST00000518951 USP17L24Q0WX57 530 aa24.56■■□□□ 1.52
TOP1MT-206ENST00000518951 KCTD1Q719H9 257 aa24.56■■□□□ 1.52
TOP1MT-206ENST00000518951 RAB11FIP4Q86YS3 637 aa24.56■■□□□ 1.52
TOP1MT-206ENST00000518951 FBXO28Q9NVF7 368 aa24.56■■□□□ 1.52
TOP1MT-206ENST00000518951 CYP2C8P10632 490 aa24.55■■□□□ 1.52
TOP1MT-206ENST00000518951 SLC1A4P43007 532 aa24.55■■□□□ 1.52
TOP1MT-206ENST00000518951 DCAF4Q8WV16 495 aa24.55■■□□□ 1.52
TOP1MT-206ENST00000518951 TANGO6Q9C0B7 1094 aa24.55■■□□□ 1.52
TOP1MT-206ENST00000518951 ASCC2Q9H1I8 757 aaPredicted RBP24.55■■□□□ 1.52
TOP1MT-206ENST00000518951 ALDH8A1Q9H2A2 487 aaPredicted RBP24.55■■□□□ 1.52
TOP1MT-206ENST00000518951 SLC45A1Q9Y2W3 748 aa24.55■■□□□ 1.52
TOP1MT-206ENST00000518951 FRMPD2Q68DX3 1309 aaPredicted RBP24.55■■□□□ 1.52
TOP1MT-206ENST00000518951 TTBK2Q6IQ55 1244 aa24.54■■□□□ 1.52
TOP1MT-206ENST00000518951 CATIPQ7Z7H3 387 aa24.54■■□□□ 1.52
TOP1MT-206ENST00000518951 P2RX7Q99572 595 aaKnown RBP24.54■■□□□ 1.52
TOP1MT-206ENST00000518951 KLF18A0A0U1RQI7 1052 aa24.53■■□□□ 1.52
TOP1MT-206ENST00000518951 GOLGA8HP0CJ92 632 aa24.53■■□□□ 1.52
TOP1MT-206ENST00000518951 RXRAP19793 462 aa24.53■■□□□ 1.52
TOP1MT-206ENST00000518951 AK2P54819 239 aa24.53■■□□□ 1.52
TOP1MT-206ENST00000518951 ZNF543Q08ER8 600 aa24.53■■□□□ 1.52
TOP1MT-206ENST00000518951 CCDC96Q2M329 555 aa24.53■■□□□ 1.52
TOP1MT-206ENST00000518951 OTUD7BQ6GQQ9 843 aa24.53■■□□□ 1.52
TOP1MT-206ENST00000518951 APOA5Q6Q788 366 aa24.53■■□□□ 1.52
TOP1MT-206ENST00000518951 ZCCHC17Q9NP64 241 aaKnown RBP24.53■■□□□ 1.52
TOP1MT-206ENST00000518951 GPCPD1Q9NPB8 672 aa24.53■■□□□ 1.52
TOP1MT-206ENST00000518951 RNF186Q9NXI6 227 aa24.53■■□□□ 1.52
TOP1MT-206ENST00000518951 SLC12A7Q9Y666 1083 aa24.53■■□□□ 1.52
TOP1MT-206ENST00000518951 TMEM232C9JQI7 657 aa24.52■■□□□ 1.52
TOP1MT-206ENST00000518951 PABPC4Q13310 644 aaKnown RBP eCLIP24.52■■□□□ 1.521e-8■□□□□ 9.2
TOP1MT-206ENST00000518951 POTEEQ6S8J3 1075 aa24.52■■□□□ 1.52
TOP1MT-206ENST00000518951 STAG2Q8N3U4 1231 aa24.52■■□□□ 1.52
TOP1MT-206ENST00000518951 NUP133Q8WUM0 1156 aa24.52■■□□□ 1.52
TOP1MT-206ENST00000518951 R3HDMLQ9H3Y0 253 aa24.52■■□□□ 1.52
TOP1MT-206ENST00000518951 COL11A1P12107 1806 aaPredicted RBP24.52■■□□□ 1.52
TOP1MT-206ENST00000518951 DDAH1O94760 285 aa24.51■■□□□ 1.51
TOP1MT-206ENST00000518951 OSBPP22059 807 aa24.51■■□□□ 1.51
TOP1MT-206ENST00000518951 EVCP57679 992 aa24.51■■□□□ 1.51
TOP1MT-206ENST00000518951 GRM4Q14833 912 aa24.51■■□□□ 1.51
TOP1MT-206ENST00000518951 TAF1CQ15572 869 aaPredicted RBP24.51■■□□□ 1.51
TOP1MT-206ENST00000518951 JMYQ8N9B5 988 aa24.51■■□□□ 1.51
TOP1MT-206ENST00000518951 MAD2L2Q9UI95 211 aa24.51■■□□□ 1.51
TOP1MT-206ENST00000518951 ISY1Q9ULR0 285 aaKnown RBP24.51■■□□□ 1.51
TOP1MT-206ENST00000518951 TRPA1O75762 1119 aa24.51■■□□□ 1.51
TOP1MT-206ENST00000518951 FLOT1O75955 427 aa24.51■■□□□ 1.51
TOP1MT-206ENST00000518951 IRX3P78415 501 aaPredicted RBP24.51■■□□□ 1.51
TOP1MT-206ENST00000518951 COG2Q14746 738 aa24.51■■□□□ 1.51
TOP1MT-206ENST00000518951 RABEP1Q15276 862 aa24.51■■□□□ 1.51
TOP1MT-206ENST00000518951 CCDC144CPQ8IYA2 1237 aa24.51■■□□□ 1.51
TOP1MT-206ENST00000518951 CPVLQ9H3G5 476 aa24.51■■□□□ 1.51
TOP1MT-206ENST00000518951 PALM3A6NDB9 673 aaPredicted RBP24.5■■□□□ 1.51
TOP1MT-206ENST00000518951 CA12O43570 354 aa24.5■■□□□ 1.51
TOP1MT-206ENST00000518951 ALDH1A1P00352 501 aa24.5■■□□□ 1.51
TOP1MT-206ENST00000518951 PARP1P09874 1014 aaKnown RBP24.5■■□□□ 1.51
TOP1MT-206ENST00000518951 DSG3P32926 999 aa24.5■■□□□ 1.51
TOP1MT-206ENST00000518951 SLC16A2P36021 539 aa24.5■■□□□ 1.51
TOP1MT-206ENST00000518951 MAP2K1Q02750 393 aaPredicted RBP24.5■■□□□ 1.51
TOP1MT-206ENST00000518951 CRHR2Q13324 411 aa24.5■■□□□ 1.51
TOP1MT-206ENST00000518951 SAMD1Q6SPF0 538 aaPredicted RBP24.5■■□□□ 1.51
TOP1MT-206ENST00000518951 MICU3Q86XE3 530 aa24.5■■□□□ 1.51
TOP1MT-206ENST00000518951 WBP1LQ9NX94 342 aa24.5■■□□□ 1.51
TOP1MT-206ENST00000518951 FEM1BQ9UK73 627 aa24.5■■□□□ 1.51
TOP1MT-206ENST00000518951 HPS5Q9UPZ3 1129 aa24.5■■□□□ 1.51
TOP1MT-206ENST00000518951 SPDYE16A6NNV3 312 aaPredicted RBP24.49■■□□□ 1.51
TOP1MT-206ENST00000518951 ZBTB43O43298 467 aa24.49■■□□□ 1.51
TOP1MT-206ENST00000518951 PEX10O60683 326 aa24.49■■□□□ 1.51
TOP1MT-206ENST00000518951 HERVK_113P62684 666 aa24.49■■□□□ 1.51
TOP1MT-206ENST00000518951 ASPRV1Q53RT3 343 aa24.49■■□□□ 1.51
TOP1MT-206ENST00000518951 BTNL9Q6UXG8 535 aa24.49■■□□□ 1.51
TOP1MT-206ENST00000518951 MAP3K14Q99558 947 aa24.49■■□□□ 1.51
TOP1MT-206ENST00000518951 UBA5Q9GZZ9 404 aa24.49■■□□□ 1.51
TOP1MT-206ENST00000518951 PNMA3Q9UL41 463 aa24.49■■□□□ 1.51
TOP1MT-206ENST00000518951 PPP1R9AQ9ULJ8 1098 aa24.49■■□□□ 1.51
TOP1MT-206ENST00000518951 NAP1L2Q9ULW6 460 aaPredicted RBP24.49■■□□□ 1.51
TOP1MT-206ENST00000518951 ADGRA2Q96PE1 1338 aa24.49■■□□□ 1.51
TOP1MT-206ENST00000518951 BAZ2BQ9UIF8 2168 aaKnown RBP24.48■■□□□ 1.51
TOP1MT-206ENST00000518951 A0A0G2JMZ2 1700 aa24.48■■□□□ 1.51
TOP1MT-206ENST00000518951 PLA2G6O60733 806 aa24.48■■□□□ 1.51
TOP1MT-206ENST00000518951 TBC1D8O95759 1140 aa24.48■■□□□ 1.51
TOP1MT-206ENST00000518951 PDIA3P30101 505 aaKnown RBP24.48■■□□□ 1.51
TOP1MT-206ENST00000518951 STAT2P52630 851 aa24.48■■□□□ 1.51
TOP1MT-206ENST00000518951 SLC35G1Q2M3R5 365 aa24.48■■□□□ 1.51
TOP1MT-206ENST00000518951 GPATCH4Q5T3I0 446 aaKnown RBP24.48■■□□□ 1.51
TOP1MT-206ENST00000518951 SYNE3Q6ZMZ3 975 aa24.48■■□□□ 1.51
TOP1MT-206ENST00000518951 NOL8Q76FK4 1167 aaKnown RBP24.48■■□□□ 1.51
TOP1MT-206ENST00000518951 FANCBQ8NB91 859 aa24.48■■□□□ 1.51
TOP1MT-206ENST00000518951 ATG4CQ96DT6 458 aa24.48■■□□□ 1.51
TOP1MT-206ENST00000518951 PARK7Q99497 189 aaKnown RBP24.48■■□□□ 1.51
TOP1MT-206ENST00000518951 SLF1Q9BQI6 1058 aa24.48■■□□□ 1.51
TOP1MT-206ENST00000518951 TPCN1Q9ULQ1 816 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms