RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 IRF2BP1Q8IU81 584 aa9.6□□□□□ -0.87
CTNNA1-210ENST00000518825 STAG2Q8N3U4 1231 aa9.6□□□□□ -0.87
CTNNA1-210ENST00000518825 SRRTQ9BXP5 876 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-210ENST00000518825 LZTFL1Q9NQ48 299 aa9.6□□□□□ -0.87
CTNNA1-210ENST00000518825 EP400Q96L91 3159 aa9.6□□□□□ -0.87
CTNNA1-210ENST00000518825 USP17L8P0C7I0 530 aa9.6□□□□□ -0.87
CTNNA1-210ENST00000518825 XBP1P17861 261 aa9.6□□□□□ -0.87
CTNNA1-210ENST00000518825 CT47A1Q5JQC4 288 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-210ENST00000518825 SLC10A5Q5PT55 438 aa9.6□□□□□ -0.87
CTNNA1-210ENST00000518825 RASGRP4Q8TDF6 673 aa9.6□□□□□ -0.87
CTNNA1-210ENST00000518825 NOL10Q9BSC4 688 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-210ENST00000518825 GNL3LQ9NVN8 582 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-210ENST00000518825 AHDC1Q5TGY3 1603 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-210ENST00000518825 TM4SF1P30408 202 aa9.59□□□□□ -0.87
CTNNA1-210ENST00000518825 CCT6AP40227 531 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-210ENST00000518825 PPP2R3AQ06190 1150 aa9.59□□□□□ -0.87
CTNNA1-210ENST00000518825 BMS1Q14692 1282 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-210ENST00000518825 GRIK5Q16478 980 aa9.59□□□□□ -0.87
CTNNA1-210ENST00000518825 RASGRP2Q7LDG7 609 aa9.59□□□□□ -0.87
CTNNA1-210ENST00000518825 GPKOWQ92917 476 aaPredicted RBP eCLIP9.59□□□□□ -0.87
CTNNA1-210ENST00000518825 GDAQ9Y2T3 454 aa9.59□□□□□ -0.87
CTNNA1-210ENST00000518825 MYH8P13535 1937 aa9.59□□□□□ -0.87
CTNNA1-210ENST00000518825 SPATA31A5Q5VU36 1347 aa9.59□□□□□ -0.87
CTNNA1-210ENST00000518825 SPATA31A7Q8IWB4 1347 aa9.59□□□□□ -0.87
CTNNA1-210ENST00000518825 CALM1P0DP23 149 aa9.59□□□□□ -0.87
CTNNA1-210ENST00000518825 CALM2P0DP24 149 aa9.59□□□□□ -0.87
CTNNA1-210ENST00000518825 CALM3P0DP25 149 aa9.59□□□□□ -0.87
CTNNA1-210ENST00000518825 PMS1P54277 932 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-210ENST00000518825 LIMA1Q9UHB6 759 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-210ENST00000518825 PP2D1A8MPX8 630 aa9.59□□□□□ -0.88
CTNNA1-210ENST00000518825 PCP11498 1178 aaKnown RBP9.59□□□□□ -0.88
CTNNA1-210ENST00000518825 CC2D1AQ6P1N0 951 aaPredicted RBP9.59□□□□□ -0.88
CTNNA1-210ENST00000518825 ACRBPQ8NEB7 543 aa9.59□□□□□ -0.88
CTNNA1-210ENST00000518825 MNS1Q8NEH6 495 aa9.59□□□□□ -0.88
CTNNA1-210ENST00000518825 PARD6BQ9BYG5 372 aa9.59□□□□□ -0.88
CTNNA1-210ENST00000518825 SRP68Q9UHB9 627 aaKnown RBP9.59□□□□□ -0.88
CTNNA1-210ENST00000518825 MAPK8IP1Q9UQF2 711 aa9.59□□□□□ -0.88
CTNNA1-210ENST00000518825 THRAP3Q9Y2W1 955 aaKnown RBP9.59□□□□□ -0.88
CTNNA1-210ENST00000518825 SEMA3EO15041 775 aa9.58□□□□□ -0.88
CTNNA1-210ENST00000518825 CYTH3O43739 400 aa9.58□□□□□ -0.88
CTNNA1-210ENST00000518825 DYNLL2Q96FJ2 89 aa9.58□□□□□ -0.88
CTNNA1-210ENST00000518825 CDCA7Q9BWT1 371 aaPredicted RBP9.58□□□□□ -0.88
CTNNA1-210ENST00000518825 GOLGA6L9A6NEM1 432 aa9.58□□□□□ -0.88
CTNNA1-210ENST00000518825 CCDC175P0C221 793 aa9.58□□□□□ -0.88
CTNNA1-210ENST00000518825 ARHGAP25P42331 645 aa9.58□□□□□ -0.88
CTNNA1-210ENST00000518825 PRCPP42785 496 aa9.58□□□□□ -0.88
CTNNA1-210ENST00000518825 NLRP5P59047 1200 aa9.58□□□□□ -0.88
CTNNA1-210ENST00000518825 SBK1Q52WX2 424 aa9.58□□□□□ -0.88
CTNNA1-210ENST00000518825 CCDC12Q8WUD4 166 aaPredicted RBP9.58□□□□□ -0.88
CTNNA1-210ENST00000518825 TMEM60Q9H2L4 133 aa9.58□□□□□ -0.88
CTNNA1-210ENST00000518825 ZNF652Q9Y2D9 606 aa9.58□□□□□ -0.88
CTNNA1-210ENST00000518825 ITIH6Q6UXX5 1313 aa9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 SBF2Q86WG5 1849 aa9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 TRIM49BA6NDI0 452 aa9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 NKRFO15226 690 aaKnown RBP eCLIP9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 BMP15O95972 392 aa9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 RPS8P62241 208 aaKnown RBP9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 RRAGBQ5VZM2 374 aa9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 PAXIP1Q6ZW49 1069 aaPredicted RBP9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 ZNF771Q7L3S4 317 aaPredicted RBP9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 IQUBQ8NA54 791 aa9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 CTCFLQ8NI51 663 aaPredicted RBP9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 VPS16Q9H269 839 aa9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 ATP8A2Q9NTI2 1148 aa9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 MAD2L2Q9UI95 211 aa9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 RWDD2AQ9UIY3 292 aa9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 PDS5AQ29RF7 1337 aaKnown RBP9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 GTPBP6O43824 516 aaPredicted RBP9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 HIBADHP31937 336 aaKnown RBP9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 TCP11X2Q5H9J9 407 aa9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 ZSWIM4Q9H7M6 989 aa9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 ANKZF1Q9H8Y5 726 aa9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 ZCCHC17Q9NP64 241 aaKnown RBP9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 ABHD10Q9NUJ1 306 aa9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 TAB2Q9NYJ8 693 aa9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 REXO2Q9Y3B8 237 aaKnown RBP9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 ZNF831Q5JPB2 1677 aa9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 USP17L3A6NCW0 530 aa9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 USP17L4A6NCW7 530 aa9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 KLRC4O43908 158 aa9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 TRAPPC10P48553 1259 aa9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 TEX35Q5T0J7 233 aa9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 USP17L1Q7RTZ2 530 aa9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 GPR161Q8N6U8 529 aaKnown RBP9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 MAST2Q6P0Q8 1798 aa9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 COL24A1Q17RW2 1714 aa9.57□□□□□ -0.88
CTNNA1-210ENST00000518825 TNRC6CQ9HCJ0 1690 aaKnown RBP9.56□□□□□ -0.88
CTNNA1-210ENST00000518825 RPN1P04843 607 aaKnown RBP9.56□□□□□ -0.88
CTNNA1-210ENST00000518825 COPB1P53618 953 aaKnown RBP9.56□□□□□ -0.88
CTNNA1-210ENST00000518825 TFAP4Q01664 338 aa9.56□□□□□ -0.88
CTNNA1-210ENST00000518825 ZNF658Q5TYW1 1059 aaPredicted RBP9.56□□□□□ -0.88
CTNNA1-210ENST00000518825 C12orf60Q5U649 245 aa9.56□□□□□ -0.88
CTNNA1-210ENST00000518825 TMCO3Q6UWJ1 677 aa9.56□□□□□ -0.88
CTNNA1-210ENST00000518825 BLIDQ8IZY5 108 aa9.56□□□□□ -0.88
CTNNA1-210ENST00000518825 SLC44A5Q8NCS7 719 aa9.56□□□□□ -0.88
CTNNA1-210ENST00000518825 NELFBQ8WX92 580 aa9.56□□□□□ -0.88
CTNNA1-210ENST00000518825 CHP1Q99653 195 aa9.56□□□□□ -0.88
CTNNA1-210ENST00000518825 NAA15Q9BXJ9 866 aaKnown RBP9.56□□□□□ -0.88
CTNNA1-210ENST00000518825 FUT8Q9BYC5 575 aa9.56□□□□□ -0.88
CTNNA1-210ENST00000518825 CRNKL1Q9BZJ0 848 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms