RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 USP17L19D6RCP7 530 aa11.05□□□□□ -0.64
CLN8-203ENST00000518780 USP17L20D6RJB6 530 aa11.05□□□□□ -0.64
CLN8-203ENST00000518780 PARP1P09874 1014 aaKnown RBP11.05□□□□□ -0.64
CLN8-203ENST00000518780 PDIA3P30101 505 aaKnown RBP11.05□□□□□ -0.64
CLN8-203ENST00000518780 GJA5P36382 358 aa11.05□□□□□ -0.64
CLN8-203ENST00000518780 HMGCS2P54868 508 aa11.05□□□□□ -0.64
CLN8-203ENST00000518780 ZNF543Q08ER8 600 aa11.05□□□□□ -0.64
CLN8-203ENST00000518780 APOBRQ0VD83 1088 aa11.05□□□□□ -0.64
CLN8-203ENST00000518780 USP17L24Q0WX57 530 aa11.05□□□□□ -0.64
CLN8-203ENST00000518780 GRM4Q14833 912 aa11.05□□□□□ -0.64
CLN8-203ENST00000518780 CPLX2Q6PUV4 134 aaKnown RBP11.05□□□□□ -0.64
CLN8-203ENST00000518780 ANKRD23Q86SG2 305 aa11.05□□□□□ -0.64
CLN8-203ENST00000518780 CCDC84Q86UT8 332 aaPredicted RBP11.05□□□□□ -0.64
CLN8-203ENST00000518780 FAM160B2Q86V87 743 aa11.05□□□□□ -0.64
CLN8-203ENST00000518780 LRRC47Q8N1G4 583 aaKnown RBP11.05□□□□□ -0.64
CLN8-203ENST00000518780 GTF3C2Q8WUA4 911 aaPredicted RBP11.05□□□□□ -0.64
CLN8-203ENST00000518780 CAPNS2Q96L46 248 aa11.05□□□□□ -0.64
CLN8-203ENST00000518780 TRPM7Q96QT4 1865 aa11.05□□□□□ -0.64
CLN8-203ENST00000518780 GPHNQ9NQX3 736 aaPredicted RBP11.05□□□□□ -0.64
CLN8-203ENST00000518780 HOXC10Q9NYD6 342 aa11.05□□□□□ -0.64
CLN8-203ENST00000518780 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.05□□□□□ -0.64
CLN8-203ENST00000518780 PNMA3Q9UL41 463 aa11.05□□□□□ -0.64
CLN8-203ENST00000518780 PNMA2Q9UL42 364 aa11.05□□□□□ -0.64
CLN8-203ENST00000518780 BRPF3Q9ULD4 1205 aa11.05□□□□□ -0.64
CLN8-203ENST00000518780 AGTPBP1Q9UPW5 1226 aa11.05□□□□□ -0.64
CLN8-203ENST00000518780 MYPNQ86TC9 1320 aa11.05□□□□□ -0.64
CLN8-203ENST00000518780 GREB1LQ9C091 1923 aaPredicted RBP11.04□□□□□ -0.64
CLN8-203ENST00000518780 CCL15-CCL14A0A0B4J2E2 113 aa11.04□□□□□ -0.64
CLN8-203ENST00000518780 PALM3A6NDB9 673 aaPredicted RBP11.04□□□□□ -0.64
CLN8-203ENST00000518780 GOLGA8BA8MQT2 603 aa11.04□□□□□ -0.64
CLN8-203ENST00000518780 PFKFB2O60825 505 aa11.04□□□□□ -0.64
CLN8-203ENST00000518780 ALDH1A1P00352 501 aa11.04□□□□□ -0.64
CLN8-203ENST00000518780 VCAM1P19320 739 aa11.04□□□□□ -0.64
CLN8-203ENST00000518780 TM4SF4P48230 202 aa11.04□□□□□ -0.64
CLN8-203ENST00000518780 METAP2P50579 478 aaKnown RBP eCLIP11.04□□□□□ -0.64
CLN8-203ENST00000518780 CCL15Q16663 113 aa11.04□□□□□ -0.64
CLN8-203ENST00000518780 BTNL9Q6UXG8 535 aa11.04□□□□□ -0.64
CLN8-203ENST00000518780 PRPF38AQ8NAV1 312 aaKnown RBP11.04□□□□□ -0.64
CLN8-203ENST00000518780 NUP133Q8WUM0 1156 aa11.04□□□□□ -0.64
CLN8-203ENST00000518780 SLKQ9H2G2 1235 aaPredicted RBP11.04□□□□□ -0.64
CLN8-203ENST00000518780 SENP2Q9HC62 589 aa11.04□□□□□ -0.64
CLN8-203ENST00000518780 RBM27Q9P2N5 1060 aaKnown RBP11.04□□□□□ -0.64
CLN8-203ENST00000518780 DOCK1Q14185 1865 aa11.04□□□□□ -0.64
CLN8-203ENST00000518780 GOLGA8AA7E2F4 631 aa11.03□□□□□ -0.64
CLN8-203ENST00000518780 KLRF2D3W0D1 207 aa11.03□□□□□ -0.64
CLN8-203ENST00000518780 RAD21O60216 631 aa11.03□□□□□ -0.64
CLN8-203ENST00000518780 CDKL5O76039 1030 aa11.03□□□□□ -0.64
CLN8-203ENST00000518780 OSBPP22059 807 aa11.03□□□□□ -0.64
CLN8-203ENST00000518780 STAT2P52630 851 aa11.03□□□□□ -0.64
CLN8-203ENST00000518780 TRAF1Q13077 416 aa11.03□□□□□ -0.64
CLN8-203ENST00000518780 MOGSQ13724 837 aa11.03□□□□□ -0.64
CLN8-203ENST00000518780 COG2Q14746 738 aa11.03□□□□□ -0.64
CLN8-203ENST00000518780 ZYXQ15942 572 aaKnown RBP11.03□□□□□ -0.64
CLN8-203ENST00000518780 RTN1Q16799 776 aa11.03□□□□□ -0.64
CLN8-203ENST00000518780 GADL1Q6ZQY3 521 aa11.03□□□□□ -0.64
CLN8-203ENST00000518780 CATSPERGQ6ZRH7 1159 aa11.03□□□□□ -0.64
CLN8-203ENST00000518780 PAXIP1Q6ZW49 1069 aaPredicted RBP11.03□□□□□ -0.64
CLN8-203ENST00000518780 MICU3Q86XE3 530 aa11.03□□□□□ -0.64
CLN8-203ENST00000518780 SPICE1Q8N0Z3 855 aa11.03□□□□□ -0.64
CLN8-203ENST00000518780 RNF39Q9H2S5 420 aa11.03□□□□□ -0.64
CLN8-203ENST00000518780 RPAP3Q9H6T3 665 aaPredicted RBP11.03□□□□□ -0.64
CLN8-203ENST00000518780 MAD2L2Q9UI95 211 aa11.03□□□□□ -0.64
CLN8-203ENST00000518780 TPCN1Q9ULQ1 816 aa11.03□□□□□ -0.64
CLN8-203ENST00000518780 HPS5Q9UPZ3 1129 aa11.03□□□□□ -0.64
CLN8-203ENST00000518780 TMEM232C9JQI7 657 aa11.02□□□□□ -0.65
CLN8-203ENST00000518780 CPLX1O14810 134 aa11.02□□□□□ -0.65
CLN8-203ENST00000518780 KIF23Q02241 960 aaPredicted RBP11.02□□□□□ -0.65
CLN8-203ENST00000518780 BECN1Q14457 450 aa11.02□□□□□ -0.65
CLN8-203ENST00000518780 ME3Q16798 604 aa11.02□□□□□ -0.65
CLN8-203ENST00000518780 CCDC96Q2M329 555 aa11.02□□□□□ -0.65
CLN8-203ENST00000518780 KIAA1755Q5JYT7 1200 aa11.02□□□□□ -0.65
CLN8-203ENST00000518780 FAM83BQ5T0W9 1011 aa11.02□□□□□ -0.65
CLN8-203ENST00000518780 CYP4F22Q6NT55 531 aa11.02□□□□□ -0.65
CLN8-203ENST00000518780 GPAT2Q6NUI2 795 aa11.02□□□□□ -0.65
CLN8-203ENST00000518780 LBX2Q6XYB7 198 aa11.02□□□□□ -0.65
CLN8-203ENST00000518780 HSCBQ8IWL3 235 aa11.02□□□□□ -0.65
CLN8-203ENST00000518780 MB21D1Q8N884 522 aa11.02□□□□□ -0.65
CLN8-203ENST00000518780 BRI3BPQ8WY22 251 aa11.02□□□□□ -0.65
CLN8-203ENST00000518780 LLPHQ9BRT6 129 aaKnown RBP11.02□□□□□ -0.65
CLN8-203ENST00000518780 SPZ1Q9BXG8 430 aa11.02□□□□□ -0.65
CLN8-203ENST00000518780 TANGO6Q9C0B7 1094 aa11.02□□□□□ -0.65
CLN8-203ENST00000518780 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.02□□□□□ -0.65
CLN8-203ENST00000518780 NAP1L2Q9ULW6 460 aaPredicted RBP11.02□□□□□ -0.65
CLN8-203ENST00000518780 WDR33Q9C0J8 1336 aaKnown RBP11.02□□□□□ -0.65
CLN8-203ENST00000518780 BTBD19C9JJ37 291 aa11.01□□□□□ -0.65
CLN8-203ENST00000518780 K7ELQ4 463 aaPredicted RBP11.01□□□□□ -0.65
CLN8-203ENST00000518780 FLOT1O75955 427 aa11.01□□□□□ -0.65
CLN8-203ENST00000518780 IFNAR1P17181 557 aa11.01□□□□□ -0.65
CLN8-203ENST00000518780 DSG3P32926 999 aa11.01□□□□□ -0.65
CLN8-203ENST00000518780 GCLCP48506 637 aaPredicted RBP11.01□□□□□ -0.65
CLN8-203ENST00000518780 OAZ1P54368 228 aa11.01□□□□□ -0.65
CLN8-203ENST00000518780 IRX3P78415 501 aaPredicted RBP11.01□□□□□ -0.65
CLN8-203ENST00000518780 TMTC3Q6ZXV5 915 aa11.01□□□□□ -0.65
CLN8-203ENST00000518780 KCTD1Q719H9 257 aa11.01□□□□□ -0.65
CLN8-203ENST00000518780 GTF3C6Q969F1 213 aa11.01□□□□□ -0.65
CLN8-203ENST00000518780 TMX3Q96JJ7 454 aa11.01□□□□□ -0.65
CLN8-203ENST00000518780 PARK7Q99497 189 aaKnown RBP11.01□□□□□ -0.65
CLN8-203ENST00000518780 SLF1Q9BQI6 1058 aa11.01□□□□□ -0.65
CLN8-203ENST00000518780 RIOX1Q9H6W3 641 aa11.01□□□□□ -0.65
CLN8-203ENST00000518780 FAM217BQ9NTX9 383 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms