RNA–Protein interactions for RNA: ENST00000518678.1

TRAM1-202, Transcript of translocation associated membrane protein 1, humanhuman

TSL 4

Gene TRAM1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-202ENST00000518678 ALDH8A1Q9H2A2 487 aaPredicted RBP20.76■□□□□ 0.91
TRAM1-202ENST00000518678 CCDC69A6NI79 296 aa20.75■□□□□ 0.91
TRAM1-202ENST00000518678 TREML2Q5T2D2 321 aa20.75■□□□□ 0.91
TRAM1-202ENST00000518678 NFXL1Q6ZNB6 911 aa20.75■□□□□ 0.91
TRAM1-202ENST00000518678 DCAF4Q8WV16 495 aa20.75■□□□□ 0.91
TRAM1-202ENST00000518678 IGF2BP3O00425 579 aaKnown RBP eCLIP20.74■□□□□ 0.91
TRAM1-202ENST00000518678 SNHG28P0DPA3 235 aa20.74■□□□□ 0.91
TRAM1-202ENST00000518678 PDHBP11177 359 aa20.74■□□□□ 0.91
TRAM1-202ENST00000518678 NEK4P51957 841 aa20.74■□□□□ 0.91
TRAM1-202ENST00000518678 TOB2Q14106 344 aaPredicted RBP20.74■□□□□ 0.91
TRAM1-202ENST00000518678 RABEP1Q15276 862 aa20.74■□□□□ 0.91
TRAM1-202ENST00000518678 CATIPQ7Z7H3 387 aa20.74■□□□□ 0.91
TRAM1-202ENST00000518678 IFNL1Q8IU54 200 aa20.74■□□□□ 0.91
TRAM1-202ENST00000518678 ZNF654Q8IZM8 581 aa20.74■□□□□ 0.91
TRAM1-202ENST00000518678 FAM43AQ8N2R8 423 aa20.74■□□□□ 0.91
TRAM1-202ENST00000518678 BRF1Q92994 677 aa20.74■□□□□ 0.91
TRAM1-202ENST00000518678 RPAP3Q9H6T3 665 aaPredicted RBP20.74■□□□□ 0.91
TRAM1-202ENST00000518678 ZCCHC17Q9NP64 241 aaKnown RBP20.74■□□□□ 0.91
TRAM1-202ENST00000518678 MTMR7Q9Y216 660 aa20.74■□□□□ 0.91
TRAM1-202ENST00000518678 SLC45A1Q9Y2W3 748 aa20.74■□□□□ 0.91
TRAM1-202ENST00000518678 USP17L15C9J2P7 530 aa20.73■□□□□ 0.91
TRAM1-202ENST00000518678 USP17L13C9JLJ4 530 aa20.73■□□□□ 0.91
TRAM1-202ENST00000518678 USP17L11C9JVI0 530 aa20.73■□□□□ 0.91
TRAM1-202ENST00000518678 USP17L18D6R9N7 530 aa20.73■□□□□ 0.91
TRAM1-202ENST00000518678 USP17L22D6RA61 530 aa20.73■□□□□ 0.91
TRAM1-202ENST00000518678 USP17L17D6RBQ6 530 aa20.73■□□□□ 0.91
TRAM1-202ENST00000518678 USP17L19D6RCP7 530 aa20.73■□□□□ 0.91
TRAM1-202ENST00000518678 USP17L20D6RJB6 530 aa20.73■□□□□ 0.91
TRAM1-202ENST00000518678 BMP3P12645 472 aa20.73■□□□□ 0.91
TRAM1-202ENST00000518678 HOXA7P31268 230 aaPredicted RBP20.73■□□□□ 0.91
TRAM1-202ENST00000518678 SLC1A4P43007 532 aa20.73■□□□□ 0.91
TRAM1-202ENST00000518678 USP17L24Q0WX57 530 aa20.73■□□□□ 0.91
TRAM1-202ENST00000518678 TROAPQ12815 778 aa20.73■□□□□ 0.91
TRAM1-202ENST00000518678 PABPC4Q13310 644 aaKnown RBP eCLIP20.73■□□□□ 0.91
TRAM1-202ENST00000518678 FAM83BQ5T0W9 1011 aa20.73■□□□□ 0.91
TRAM1-202ENST00000518678 RASGRP2Q7LDG7 609 aa20.73■□□□□ 0.91
TRAM1-202ENST00000518678 NUP88Q99567 741 aaPredicted RBP20.73■□□□□ 0.91
TRAM1-202ENST00000518678 BRPF3Q9ULD4 1205 aa20.73■□□□□ 0.91
TRAM1-202ENST00000518678 SLC12A7Q9Y666 1083 aa20.73■□□□□ 0.91
TRAM1-202ENST00000518678 PDHXO00330 501 aa20.72■□□□□ 0.91
TRAM1-202ENST00000518678 DDAH1O94760 285 aa20.72■□□□□ 0.91
TRAM1-202ENST00000518678 APOBRQ0VD83 1088 aa20.72■□□□□ 0.91
TRAM1-202ENST00000518678 OTUD7BQ6GQQ9 843 aa20.72■□□□□ 0.91
TRAM1-202ENST00000518678 CATSPERGQ6ZRH7 1159 aa20.72■□□□□ 0.91
TRAM1-202ENST00000518678 IL27Q8NEV9 243 aa20.72■□□□□ 0.91
TRAM1-202ENST00000518678 ZNF296Q8WUU4 475 aaPredicted RBP20.72■□□□□ 0.91
TRAM1-202ENST00000518678 MAP3K14Q99558 947 aa20.72■□□□□ 0.91
TRAM1-202ENST00000518678 KLF18A0A0U1RQI7 1052 aa20.71■□□□□ 0.91
TRAM1-202ENST00000518678 EVCP57679 992 aa20.71■□□□□ 0.91
TRAM1-202ENST00000518678 ZNF543Q08ER8 600 aa20.71■□□□□ 0.91
TRAM1-202ENST00000518678 ANKRD1Q15327 319 aa20.71■□□□□ 0.91
TRAM1-202ENST00000518678 CCDC96Q2M329 555 aa20.71■□□□□ 0.91
TRAM1-202ENST00000518678 APOA5Q6Q788 366 aa20.71■□□□□ 0.91
TRAM1-202ENST00000518678 SYNE3Q6ZMZ3 975 aa20.71■□□□□ 0.91
TRAM1-202ENST00000518678 CHMP4CQ96CF2 233 aa20.71■□□□□ 0.91
TRAM1-202ENST00000518678 TANGO6Q9C0B7 1094 aa20.71■□□□□ 0.91
TRAM1-202ENST00000518678 CALM1P0DP23 149 aa20.7■□□□□ 0.9
TRAM1-202ENST00000518678 CALM2P0DP24 149 aa20.7■□□□□ 0.9
TRAM1-202ENST00000518678 CALM3P0DP25 149 aa20.7■□□□□ 0.9
TRAM1-202ENST00000518678 OSBPP22059 807 aa20.7■□□□□ 0.9
TRAM1-202ENST00000518678 AK2P54819 239 aa20.7■□□□□ 0.9
TRAM1-202ENST00000518678 GRM4Q14833 912 aa20.7■□□□□ 0.9
TRAM1-202ENST00000518678 MYL10Q9BUA6 226 aa20.7■□□□□ 0.9
TRAM1-202ENST00000518678 ASCC2Q9H1I8 757 aaPredicted RBP20.7■□□□□ 0.9
TRAM1-202ENST00000518678 FEM1BQ9UK73 627 aa20.7■□□□□ 0.9
TRAM1-202ENST00000518678 PNMA3Q9UL41 463 aa20.7■□□□□ 0.9
TRAM1-202ENST00000518678 HTTP42858 3142 aa20.69■□□□□ 0.9
TRAM1-202ENST00000518678 TNRC18O15417 2968 aaPredicted RBP20.69■□□□□ 0.9
TRAM1-202ENST00000518678 ALDH1A1P00352 501 aa20.69■□□□□ 0.9
TRAM1-202ENST00000518678 PARP1P09874 1014 aaKnown RBP20.69■□□□□ 0.9
TRAM1-202ENST00000518678 RCAN1P53805 252 aa20.69■□□□□ 0.9
TRAM1-202ENST00000518678 IRX3P78415 501 aaPredicted RBP20.69■□□□□ 0.9
TRAM1-202ENST00000518678 ASPRV1Q53RT3 343 aa20.69■□□□□ 0.9
TRAM1-202ENST00000518678 GPATCH4Q5T3I0 446 aaKnown RBP20.69■□□□□ 0.9
TRAM1-202ENST00000518678 KCTD1Q719H9 257 aa20.69■□□□□ 0.9
TRAM1-202ENST00000518678 NUP133Q8WUM0 1156 aa20.69■□□□□ 0.9
TRAM1-202ENST00000518678 ISY1Q9ULR0 285 aaKnown RBP20.69■□□□□ 0.9
TRAM1-202ENST00000518678 FRMPD2Q68DX3 1309 aaPredicted RBP20.69■□□□□ 0.9
TRAM1-202ENST00000518678 PARP14Q460N5 1801 aa20.69■□□□□ 0.9
TRAM1-202ENST00000518678 PALM3A6NDB9 673 aaPredicted RBP20.68■□□□□ 0.9
TRAM1-202ENST00000518678 TMEM232C9JQI7 657 aa20.68■□□□□ 0.9
TRAM1-202ENST00000518678 GPR25O00155 361 aa20.68■□□□□ 0.9
TRAM1-202ENST00000518678 ZBTB43O43298 467 aa20.68■□□□□ 0.9
TRAM1-202ENST00000518678 PLA2G6O60733 806 aa20.68■□□□□ 0.9
TRAM1-202ENST00000518678 FLOT1O75955 427 aa20.68■□□□□ 0.9
TRAM1-202ENST00000518678 COG2Q14746 738 aa20.68■□□□□ 0.9
TRAM1-202ENST00000518678 MICU3Q86XE3 530 aa20.68■□□□□ 0.9
TRAM1-202ENST00000518678 CTCFLQ8NI51 663 aaPredicted RBP20.68■□□□□ 0.9
TRAM1-202ENST00000518678 PARK7Q99497 189 aaKnown RBP20.68■□□□□ 0.9
TRAM1-202ENST00000518678 GPCPD1Q9NPB8 672 aa20.68■□□□□ 0.9
TRAM1-202ENST00000518678 FBXO28Q9NVF7 368 aa20.68■□□□□ 0.9
TRAM1-202ENST00000518678 MAD2L2Q9UI95 211 aa20.68■□□□□ 0.9
TRAM1-202ENST00000518678 ZSWIM8A7E2V4 1837 aa20.68■□□□□ 0.9
TRAM1-202ENST00000518678 RLFQ13129 1914 aa20.68■□□□□ 0.9
TRAM1-202ENST00000518678 GOLGA8BA8MQT2 603 aa20.67■□□□□ 0.9
TRAM1-202ENST00000518678 GOLGA8HP0CJ92 632 aa20.67■□□□□ 0.9
TRAM1-202ENST00000518678 STAT2P52630 851 aa20.67■□□□□ 0.9
TRAM1-202ENST00000518678 CAP1Q01518 475 aa20.67■□□□□ 0.9
TRAM1-202ENST00000518678 TAF1CQ15572 869 aaPredicted RBP20.67■□□□□ 0.9
TRAM1-202ENST00000518678 BTNL9Q6UXG8 535 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms