RNA–Protein interactions for RNA: ENST00000518387.1

CTD-2270F17.1-201, humanhuman

TSL 1 (best) BASIC

Gene CTD-2270F17.1, Length 1,215 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTD-2270F17.1-201ENST00000518387 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.85□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 TMX2Q9Y320 296 aa12.85□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 TACC3Q9Y6A5 838 aa12.85□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 PTCH2Q9Y6C5 1203 aa12.85□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 ZMYM6O95789 1325 aa12.85□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 PLIN4Q96Q06 1357 aa12.84□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 CHMLP26374 656 aa12.84□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 CATSPERGQ6ZRH7 1159 aa12.84□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 ZNF467Q7Z7K2 595 aaPredicted RBP12.84□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 TBC1D10CQ8IV04 446 aa12.84□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 RUFY2Q8WXA3 655 aa12.84□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 GOPCQ9HD26 462 aa12.84□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 TXNRD2Q9NNW7 524 aa12.84□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 CLIP2Q9UDT6 1046 aa12.84□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 ANAPC4Q9UJX5 808 aa12.84□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 ISY1Q9ULR0 285 aaKnown RBP12.84□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 MYPNQ86TC9 1320 aa12.84□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 RAD50Q92878 1312 aa12.84□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 CENPFP49454 3210 aa12.83□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 IGKV6D-41A0A0C4DH26 115 aa12.83□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 ZNF213O14771 459 aa12.83□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 NMT2O60551 498 aa12.83□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 FLOT1O75955 427 aa12.83□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 MYCP01106 439 aaPredicted RBP12.83□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 FAM83BQ5T0W9 1011 aa12.83□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 NEDD1Q8NHV4 660 aa12.83□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 LPAR1Q92633 364 aa12.83□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 NUP88Q99567 741 aaPredicted RBP12.83□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 DSCC1Q9BVC3 393 aa12.83□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 NBPF3Q9H094 633 aa12.83□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 GABRQQ9UN88 632 aa12.83□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 STX8Q9UNK0 236 aa12.83□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 MTMR7Q9Y216 660 aa12.83□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 NEDD4P46934 1319 aa12.83□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 SPDYE16A6NNV3 312 aaPredicted RBP12.82□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 WDR46O15213 610 aaKnown RBP12.82□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 ORC4O43929 436 aa12.82□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 TTLL1O95922 423 aa12.82□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 SOX10P56693 466 aa12.82□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 ERVK-9P63128 1117 aa12.82□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 ERVK-24P63145 666 aa12.82□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 PRKCZQ05513 592 aa12.82□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 SLC9C1Q4G0N8 1177 aa12.82□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 AKNAD1Q5T1N1 836 aa12.82□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 WDR78Q5VTH9 848 aa12.82□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 MFSD6Q6ZSS7 791 aa12.82□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 CCAR1Q8IX12 1150 aaKnown RBP12.82□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 GPRC5AQ8NFJ5 357 aa12.82□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 RAET1EQ8TD07 263 aa12.82□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 CWC22Q9HCG8 908 aaKnown RBP12.82□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 MTMR4Q9NYA4 1195 aa12.82□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 NYAP2Q9P242 653 aa12.82□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 RBPJLQ9UBG7 517 aa12.82□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 SRRDQ9UH36 339 aa12.82□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 CIZ1Q9ULV3 898 aaPredicted RBP12.82□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 NDUFB10O96000 172 aa12.81□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 GNRH1P01148 92 aa12.81□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 HOXD10P28358 340 aa12.81□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 IMMTQ16891 758 aaKnown RBP12.81□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 POTEEQ6S8J3 1075 aa12.81□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 SH3TC2Q8TF17 1288 aa12.81□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 GTF3C2Q8WUA4 911 aaPredicted RBP12.81□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 STAG1Q8WVM7 1258 aa12.81□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 COA7Q96BR5 231 aa12.81□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 ATG4CQ96DT6 458 aa12.81□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 PORCNQ9H237 461 aa12.81□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 FBXO28Q9NVF7 368 aa12.81□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 MORF4L1Q9UBU8 362 aa12.81□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 RBBP6Q7Z6E9 1792 aaKnown RBP12.8□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 F5H6K3 240 aa12.8□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 SGSM2O43147 1006 aa12.8□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 CNMDO75829 334 aa12.8□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 FLT3LGP49771 235 aa12.8□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 PLCB2Q00722 1185 aa12.8□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 PTH1RQ03431 593 aa12.8□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 KLRC3Q07444 240 aa12.8□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 PLS1Q14651 629 aa12.8□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 COG2Q14746 738 aa12.8□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 Q3C1V9 767 aa12.8□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 BMP2KLQ5H9B9 411 aa12.8□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 RASGRP2Q7LDG7 609 aa12.8□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 NKX2-3Q8TAU0 364 aa12.8□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 ZKSCAN3Q9BRR0 538 aa12.8□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 RNF41Q9H4P4 317 aaPredicted RBP12.8□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 IL17RBQ9NRM6 502 aa12.8□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 PPP4R2Q9NY27 417 aa12.8□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 BTBD7Q9P203 1132 aa12.8□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 CTNNA3Q9UI47 895 aa12.8□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 ZNFX1Q9P2E3 1918 aaKnown RBP12.8□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 B4E1Z4 1266 aa12.79□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 PRMT2P55345 433 aa12.79□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 SLFN13Q68D06 897 aa12.79□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 BIN2Q9UBW5 565 aaPredicted RBP12.79□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 RABGAP1Q9Y3P9 1069 aa12.79□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 PLXNA1Q9UIW2 1896 aa12.78□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 KDM4AO75164 1064 aa12.78□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 FGRP09769 529 aa12.78□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 ELNP15502 786 aa12.78□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 CCNA1P78396 465 aa12.78□□□□□ -0.36
CTD-2270F17.1-201ENST00000518387 IKQ13123 557 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms