RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 NBPF3Q9H094 633 aa22.08■■□□□ 1.13
FAM49B-208ENST00000518344 RNF41Q9H4P4 317 aaPredicted RBP22.08■■□□□ 1.13
FAM49B-208ENST00000518344 CTNNA3Q9UI47 895 aa22.08■■□□□ 1.13
FAM49B-208ENST00000518344 POTEFA5A3E0 1075 aa22.07■■□□□ 1.12
FAM49B-208ENST00000518344 CENPBP07199 599 aaPredicted RBP22.07■■□□□ 1.12
FAM49B-208ENST00000518344 CYP2B6P20813 491 aa22.07■■□□□ 1.12
FAM49B-208ENST00000518344 UBXN2AP68543 259 aa22.07■■□□□ 1.12
FAM49B-208ENST00000518344 IMMTQ16891 758 aaKnown RBP22.07■■□□□ 1.12
FAM49B-208ENST00000518344 SLFN13Q68D06 897 aa22.07■■□□□ 1.12
FAM49B-208ENST00000518344 STAG1Q8WVM7 1258 aa22.07■■□□□ 1.12
FAM49B-208ENST00000518344 SPATC1LQ9H0A9 340 aa22.07■■□□□ 1.12
FAM49B-208ENST00000518344 ISY1Q9ULR0 285 aaKnown RBP22.07■■□□□ 1.12
FAM49B-208ENST00000518344 RAD50Q92878 1312 aa22.06■■□□□ 1.12
FAM49B-208ENST00000518344 GREB1LQ9C091 1923 aaPredicted RBP22.06■■□□□ 1.12
FAM49B-208ENST00000518344 PCP11498 1178 aaKnown RBP22.06■■□□□ 1.12
FAM49B-208ENST00000518344 MTFR1Q15390 333 aa22.06■■□□□ 1.12
FAM49B-208ENST00000518344 GMCL1P1Q8NEA9 526 aa22.06■■□□□ 1.12
FAM49B-208ENST00000518344 PXYLP1Q8TE99 480 aa22.06■■□□□ 1.12
FAM49B-208ENST00000518344 MOV10L1Q9BXT6 1211 aaKnown RBP22.06■■□□□ 1.12
FAM49B-208ENST00000518344 PPP1R9AQ9ULJ8 1098 aa22.06■■□□□ 1.12
FAM49B-208ENST00000518344 SYNPO2Q9UMS6 1093 aa22.06■■□□□ 1.12
FAM49B-208ENST00000518344 MGAMO43451 1857 aa22.06■■□□□ 1.12
FAM49B-208ENST00000518344 MLLT1Q03111 559 aaPredicted RBP22.05■■□□□ 1.12
FAM49B-208ENST00000518344 SOCS4Q8WXH5 440 aa22.05■■□□□ 1.12
FAM49B-208ENST00000518344 SLF1Q9BQI6 1058 aa22.05■■□□□ 1.12
FAM49B-208ENST00000518344 MTMR7Q9Y216 660 aa22.05■■□□□ 1.12
FAM49B-208ENST00000518344 HTTP42858 3142 aa22.05■■□□□ 1.12
FAM49B-208ENST00000518344 INHAP05111 366 aa22.04■■□□□ 1.12
FAM49B-208ENST00000518344 BMP3P12645 472 aa22.04■■□□□ 1.12
FAM49B-208ENST00000518344 TMEM132BQ14DG7 1078 aa22.04■■□□□ 1.12
FAM49B-208ENST00000518344 ESR2Q92731 530 aa22.04■■□□□ 1.12
FAM49B-208ENST00000518344 ADAMTS5Q9UNA0 930 aa22.04■■□□□ 1.12
FAM49B-208ENST00000518344 IVNS1ABPQ9Y6Y0 642 aa22.04■■□□□ 1.12
FAM49B-208ENST00000518344 NEDD4P46934 1319 aa22.04■■□□□ 1.12
FAM49B-208ENST00000518344 VWA5AO00534 786 aa22.03■■□□□ 1.12
FAM49B-208ENST00000518344 SGSM2O43147 1006 aa22.03■■□□□ 1.12
FAM49B-208ENST00000518344 CCL5P13501 91 aa22.03■■□□□ 1.12
FAM49B-208ENST00000518344 ERCC3P19447 782 aa22.03■■□□□ 1.12
FAM49B-208ENST00000518344 EN2P19622 333 aaPredicted RBP22.03■■□□□ 1.12
FAM49B-208ENST00000518344 PTPREP23469 700 aa22.03■■□□□ 1.12
FAM49B-208ENST00000518344 MCCP23508 829 aa22.03■■□□□ 1.12
FAM49B-208ENST00000518344 PTH1RQ03431 593 aa22.03■■□□□ 1.12
FAM49B-208ENST00000518344 MORN1Q5T089 497 aa22.03■■□□□ 1.12
FAM49B-208ENST00000518344 NCAPG2Q86XI2 1143 aa22.03■■□□□ 1.12
FAM49B-208ENST00000518344 PRPF38AQ8NAV1 312 aaKnown RBP22.03■■□□□ 1.12
FAM49B-208ENST00000518344 NKX2-3Q8TAU0 364 aa22.03■■□□□ 1.12
FAM49B-208ENST00000518344 KIFC2Q96AC6 838 aa22.03■■□□□ 1.12
FAM49B-208ENST00000518344 TCP11L1Q9NUJ3 509 aa22.03■■□□□ 1.12
FAM49B-208ENST00000518344 CTDP1Q9Y5B0 961 aaPredicted RBP22.03■■□□□ 1.12
FAM49B-208ENST00000518344 RGS2P41220 211 aa22.02■■□□□ 1.12
FAM49B-208ENST00000518344 SLC1A4P43007 532 aa22.02■■□□□ 1.12
FAM49B-208ENST00000518344 RNF208Q9H0X6 261 aa22.02■■□□□ 1.12
FAM49B-208ENST00000518344 FEM1BQ9UK73 627 aa22.02■■□□□ 1.12
FAM49B-208ENST00000518344 SLC15A5A6NIM6 579 aa22.01■■□□□ 1.11
FAM49B-208ENST00000518344 TMEM232C9JQI7 657 aa22.01■■□□□ 1.11
FAM49B-208ENST00000518344 ZBED4O75132 1171 aa22.01■■□□□ 1.11
FAM49B-208ENST00000518344 TOP1P11387 765 aaKnown RBP22.01■■□□□ 1.11
FAM49B-208ENST00000518344 IKQ13123 557 aaPredicted RBP22.01■■□□□ 1.11
FAM49B-208ENST00000518344 MAP2K5Q13163 448 aa22.01■■□□□ 1.11
FAM49B-208ENST00000518344 SHCBP1Q8NEM2 672 aa22.01■■□□□ 1.11
FAM49B-208ENST00000518344 USP6NLQ92738 828 aa22.01■■□□□ 1.11
FAM49B-208ENST00000518344 TMEM47Q9BQJ4 181 aa22.01■■□□□ 1.11
FAM49B-208ENST00000518344 ZKSCAN3Q9BRR0 538 aa22.01■■□□□ 1.11
FAM49B-208ENST00000518344 UNC93B1Q9H1C4 597 aa22.01■■□□□ 1.11
FAM49B-208ENST00000518344 B4E1Z4 1266 aa22■■□□□ 1.11
FAM49B-208ENST00000518344 KDM4AO75164 1064 aa22■■□□□ 1.11
FAM49B-208ENST00000518344 HMGCRP04035 888 aa22■■□□□ 1.11
FAM49B-208ENST00000518344 XRCC5P13010 732 aaKnown RBP22■■□□□ 1.11
FAM49B-208ENST00000518344 STAT3P40763 770 aa22■■□□□ 1.11
FAM49B-208ENST00000518344 NOVP48745 357 aa22■■□□□ 1.11
FAM49B-208ENST00000518344 SLC4A3P48751 1232 aa22■■□□□ 1.11
FAM49B-208ENST00000518344 BMP2KLQ5H9B9 411 aa22■■□□□ 1.11
FAM49B-208ENST00000518344 KCTD1Q719H9 257 aa22■■□□□ 1.11
FAM49B-208ENST00000518344 GMCL1Q96IK5 515 aa22■■□□□ 1.11
FAM49B-208ENST00000518344 MROH8Q9H579 483 aa22■■□□□ 1.11
FAM49B-208ENST00000518344 SLC25A27O95847 323 aa21.99■■□□□ 1.11
FAM49B-208ENST00000518344 ZKSCAN1P17029 563 aaPredicted RBP21.99■■□□□ 1.11
FAM49B-208ENST00000518344 TRIM32Q13049 653 aa21.99■■□□□ 1.11
FAM49B-208ENST00000518344 GRB14Q14449 540 aa21.99■■□□□ 1.11
FAM49B-208ENST00000518344 CCL14Q16627 93 aa21.99■■□□□ 1.11
FAM49B-208ENST00000518344 KIAA1211Q6ZU35 1233 aa21.99■■□□□ 1.11
FAM49B-208ENST00000518344 RIOX2Q8IUF8 465 aa21.99■■□□□ 1.11
FAM49B-208ENST00000518344 CPXCR1Q8N123 301 aa21.99■■□□□ 1.11
FAM49B-208ENST00000518344 REPS2Q8NFH8 660 aa21.99■■□□□ 1.11
FAM49B-208ENST00000518344 TRIB2Q92519 343 aa21.99■■□□□ 1.11
FAM49B-208ENST00000518344 TTC14Q96N46 770 aa21.99■■□□□ 1.11
FAM49B-208ENST00000518344 U3KPZ7 1027 aaPredicted RBP21.99■■□□□ 1.11
FAM49B-208ENST00000518344 STRNO43815 780 aa21.98■■□□□ 1.11
FAM49B-208ENST00000518344 STAT2P52630 851 aa21.98■■□□□ 1.11
FAM49B-208ENST00000518344 CCDC96Q2M329 555 aa21.98■■□□□ 1.11
FAM49B-208ENST00000518344 RCSD1Q6JBY9 416 aa21.98■■□□□ 1.11
FAM49B-208ENST00000518344 RASGRP2Q7LDG7 609 aa21.98■■□□□ 1.11
FAM49B-208ENST00000518344 DPP9Q86TI2 863 aa21.98■■□□□ 1.11
FAM49B-208ENST00000518344 IQCA1Q86XH1 822 aa21.98■■□□□ 1.11
FAM49B-208ENST00000518344 TRMT44Q8IYL2 757 aaKnown RBP21.98■■□□□ 1.11
FAM49B-208ENST00000518344 CHURC1Q8WUH1 139 aa21.98■■□□□ 1.11
FAM49B-208ENST00000518344 APBA2Q99767 749 aa21.98■■□□□ 1.11
FAM49B-208ENST00000518344 KRT23Q9C075 422 aa21.98■■□□□ 1.11
FAM49B-208ENST00000518344 CNNM2Q9H8M5 875 aa21.98■■□□□ 1.11
FAM49B-208ENST00000518344 CENPFP49454 3210 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms