RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 PREX1Q8TCU6 1659 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 TARSL2A2RTX5 802 aaKnown RBP7.43□□□□□ -1.22
CPNE3-203ENST00000517490 ATP2C2O75185 946 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 USP14P54578 494 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 NR1I3Q14994 352 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 CCDC170Q8IYT3 715 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 ZNF444Q8N0Y2 327 aaPredicted RBP7.43□□□□□ -1.22
CPNE3-203ENST00000517490 PUS3Q9BZE2 481 aaKnown RBP7.43□□□□□ -1.22
CPNE3-203ENST00000517490 MRPL44Q9H9J2 332 aaKnown RBP7.43□□□□□ -1.22
CPNE3-203ENST00000517490 PPP1R12BO60237 982 aaPredicted RBP7.43□□□□□ -1.22
CPNE3-203ENST00000517490 USP5P45974 858 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 ZRSR2Q15696 482 aaKnown RBP7.43□□□□□ -1.22
CPNE3-203ENST00000517490 ZNF658Q5TYW1 1059 aaPredicted RBP7.43□□□□□ -1.22
CPNE3-203ENST00000517490 KNDC1Q76NI1 1749 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 SPATA5Q8NB90 893 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 LRRN4CLQ8ND94 238 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 CABS1Q96KC9 395 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 SCLT1Q96NL6 688 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 AGXT2Q9BYV1 514 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 TAOK3Q9H2K8 898 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 SWAP70Q9UH65 585 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 PCDHB6Q9Y5E3 794 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 MROH7-TTC4A0A0A0MT08 1334 aa7.42□□□□□ -1.22
CPNE3-203ENST00000517490 PARP1P09874 1014 aaKnown RBP7.42□□□□□ -1.22
CPNE3-203ENST00000517490 CCDC172P0C7W6 258 aa7.42□□□□□ -1.22
CPNE3-203ENST00000517490 HPDP32754 393 aaPredicted RBP7.42□□□□□ -1.22
CPNE3-203ENST00000517490 TCIRG1Q13488 830 aa7.42□□□□□ -1.22
CPNE3-203ENST00000517490 MTF1Q14872 753 aa7.42□□□□□ -1.22
CPNE3-203ENST00000517490 CCDC152Q4G0S7 254 aa7.42□□□□□ -1.22
CPNE3-203ENST00000517490 CCDC155Q8N6L0 562 aa7.42□□□□□ -1.22
CPNE3-203ENST00000517490 MSANTD4Q8NCY6 345 aa7.42□□□□□ -1.22
CPNE3-203ENST00000517490 CCDC113Q9H0I3 377 aa7.42□□□□□ -1.22
CPNE3-203ENST00000517490 STMN4Q9H169 189 aaPredicted RBP7.42□□□□□ -1.22
CPNE3-203ENST00000517490 PLEKHA4Q9H4M7 779 aa7.42□□□□□ -1.22
CPNE3-203ENST00000517490 CEP170BQ9Y4F5 1589 aaPredicted RBP7.42□□□□□ -1.22
CPNE3-203ENST00000517490 ANO9A1A5B4 782 aa7.42□□□□□ -1.22
CPNE3-203ENST00000517490 STK25O00506 426 aa7.42□□□□□ -1.22
CPNE3-203ENST00000517490 TEX33O43247 280 aa7.42□□□□□ -1.22
CPNE3-203ENST00000517490 A1BGP04217 495 aa7.42□□□□□ -1.22
CPNE3-203ENST00000517490 TRAPPC10P48553 1259 aa7.42□□□□□ -1.22
CPNE3-203ENST00000517490 BEND6Q5SZJ8 279 aaPredicted RBP7.42□□□□□ -1.22
CPNE3-203ENST00000517490 SMYD4Q8IYR2 804 aaPredicted RBP7.42□□□□□ -1.22
CPNE3-203ENST00000517490 RSRC1Q96IZ7 334 aaKnown RBP7.42□□□□□ -1.22
CPNE3-203ENST00000517490 SPAG5Q96R06 1193 aa7.42□□□□□ -1.22
CPNE3-203ENST00000517490 NUCKS1Q9H1E3 243 aaKnown RBP7.42□□□□□ -1.22
CPNE3-203ENST00000517490 PCDH11XQ9BZA7 1347 aa7.42□□□□□ -1.22
CPNE3-203ENST00000517490 PCDH11YQ9BZA8 1340 aa7.42□□□□□ -1.22
CPNE3-203ENST00000517490 LONP1P36776 959 aaKnown RBP7.42□□□□□ -1.22
CPNE3-203ENST00000517490 MTMR3Q13615 1198 aa7.42□□□□□ -1.22
CPNE3-203ENST00000517490 CHRNA2Q15822 529 aa7.42□□□□□ -1.22
CPNE3-203ENST00000517490 TCP11X2Q5H9J9 407 aa7.42□□□□□ -1.22
CPNE3-203ENST00000517490 TTLL7Q6ZT98 887 aa7.42□□□□□ -1.22
CPNE3-203ENST00000517490 HEATR3Q7Z4Q2 680 aa7.42□□□□□ -1.22
CPNE3-203ENST00000517490 COG1Q8WTW3 980 aa7.42□□□□□ -1.22
CPNE3-203ENST00000517490 IRX2Q9BZI1 471 aaPredicted RBP7.42□□□□□ -1.22
CPNE3-203ENST00000517490 CPDO75976 1380 aa7.42□□□□□ -1.22
CPNE3-203ENST00000517490 E7EVH7 732 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 RGL2O15211 777 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 PRR29P0C7W0 189 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 PTGDRQ13258 359 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 NR5A1Q13285 461 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 SLC9C1Q4G0N8 1177 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 TYW1BQ6NUM6 668 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 EMBQ6PCB8 327 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 CRACR2BQ8N4Y2 399 aaPredicted RBP7.41□□□□□ -1.22
CPNE3-203ENST00000517490 HELBQ8NG08 1087 aaPredicted RBP7.41□□□□□ -1.22
CPNE3-203ENST00000517490 SEPT11Q9NVA2 429 aaKnown RBP7.41□□□□□ -1.22
CPNE3-203ENST00000517490 FAM169AQ9Y6X4 670 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 ITIH6Q6UXX5 1313 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 ABCC12Q96J65 1359 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 ZMYND10O75800 440 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 PCCAP05165 728 aaPredicted RBP7.41□□□□□ -1.22
CPNE3-203ENST00000517490 CORO7P57737 925 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 FMR1Q06787 632 aaKnown RBP eCLIP7.41□□□□□ -1.22
CPNE3-203ENST00000517490 PPARAQ07869 468 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 SV2BQ7L1I2 683 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 C2CD5Q86YS7 1000 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 IFNLR1Q8IU57 520 aaPredicted RBP7.41□□□□□ -1.22
CPNE3-203ENST00000517490 CCDC26Q8TAB7 109 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 PLIN2Q99541 437 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 HPSEQ9Y251 543 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 MROH5Q6ZUA9 1318 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 FOXN1O15353 648 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 GGCXP38435 758 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 VWA3BQ502W6 1294 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 CEP85LQ5SZL2 805 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 CMTR1Q8N1G2 835 aaKnown RBP7.41□□□□□ -1.22
CPNE3-203ENST00000517490 THAP9Q9H5L6 903 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 C6orf50Q9HD87 102 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 RNF14Q9UBS8 474 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 ATP1A2P50993 1020 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 ZBED6P86452 979 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 RAD9BQ6WBX8 426 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 DZIP1Q86YF9 867 aaKnown RBP7.41□□□□□ -1.22
CPNE3-203ENST00000517490 UBLCP1Q8WVY7 318 aaPredicted RBP7.41□□□□□ -1.22
CPNE3-203ENST00000517490 PSMB7Q99436 277 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 INCENPQ9NQS7 918 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 RASAL2Q9UJF2 1139 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 L1RE1Q9UN81 338 aa7.41□□□□□ -1.22
CPNE3-203ENST00000517490 TULP2O00295 520 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms