RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 BRF1Q92994 677 aa4.39□□□□□ -1.71
SCARNA15.2-201ENST00000516409 MTMR8Q96EF0 704 aa4.39□□□□□ -1.71
SCARNA15.2-201ENST00000516409 C8orf48Q96LL4 319 aa4.39□□□□□ -1.71
SCARNA15.2-201ENST00000516409 TMPRSS13Q9BYE2 586 aa4.39□□□□□ -1.71
SCARNA15.2-201ENST00000516409 ASPSCR1Q9BZE9 553 aa4.39□□□□□ -1.71
SCARNA15.2-201ENST00000516409 WHRNQ9P202 907 aa4.39□□□□□ -1.71
SCARNA15.2-201ENST00000516409 EMC9Q9Y3B6 208 aa4.39□□□□□ -1.71
SCARNA15.2-201ENST00000516409 SYNGAP1Q96PV0 1343 aa4.39□□□□□ -1.71
SCARNA15.2-201ENST00000516409 LOC102724159A0A0B4J2E5 919 aa4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 SHTN1A0MZ66 631 aa4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 PLEKHD1A6NEE1 506 aa4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 SHISA8B8ZZ34 492 aa4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 KCNH1O95259 989 aa4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 SCGB1D2O95969 90 aa4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 DRD2P14416 443 aa4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 CPEP16870 476 aa4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 MTMR1Q13613 665 aa4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 COL9A3Q14050 684 aaPredicted RBP4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 PPP2R5DQ14738 602 aa4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 PWP2Q15269 919 aaKnown RBP4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 NBPF12Q5TAG4 269 aaPredicted RBP4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 ACAD11Q709F0 780 aa4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 ILDR2Q71H61 639 aa4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 ARMCX6Q7L4S7 300 aa4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 DYMQ7RTS9 669 aa4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 TRIM59Q8IWR1 403 aa4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 C7orf61Q8IZ16 206 aa4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 KCT2Q8NC54 265 aa4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 GSTCDQ8NEC7 633 aa4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 WDR66Q8TBY9 1149 aa4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 SCLYQ96I15 445 aa4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 BTBD6Q96KE9 485 aa4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 FOXQ1Q9C009 403 aa4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 MTFR1LQ9H019 292 aa4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 CCDC8Q9H0W5 538 aaPredicted RBP4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 PIDD1Q9HB75 910 aa4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 GP6Q9HCN6 339 aa4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 SSU72Q9NP77 194 aaKnown RBP4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 CGGBP1Q9UFW8 167 aaPredicted RBP4.38□□□□□ -1.71
SCARNA15.2-201ENST00000516409 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 JMJD7P0C870 316 aa4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 ITGA4P13612 1032 aa4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 AMPD1P23109 780 aa4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 CAP2P40123 477 aa4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 KCNJ6P48051 423 aa4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 NEK2P51955 445 aa4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 GABREP78334 506 aa4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 SRSF11Q05519 484 aaKnown RBP4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 ITKQ08881 620 aa4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 AUHQ13825 339 aaKnown RBP4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 STAT4Q14765 748 aa4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 NTRK3Q16288 839 aa4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 PRSS53Q2L4Q9 553 aa4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 ANKRD39Q53RE8 183 aa4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 NUTM2GQ5VZR2 741 aa4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 GTF2IRD2BQ6EKJ0 949 aa4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 KIAA1211Q6ZU35 1233 aa4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 GTF2IRD2Q86UP8 949 aa4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 EXOC8Q8IYI6 725 aa4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 AHI1Q8N157 1196 aa4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 DNAJB8Q8NHS0 232 aa4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 PMM1Q92871 262 aa4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 KREMEN1Q96MU8 473 aa4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 NOL6Q9H6R4 1146 aaKnown RBP4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 PRDM6Q9NQX0 595 aa4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 SLC5A4Q9NY91 659 aa4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 NXF1Q9UBU9 619 aaKnown RBP4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 FBXL21Q9UKT6 434 aa4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 TRAF6Q9Y4K3 522 aa4.37□□□□□ -1.71
SCARNA15.2-201ENST00000516409 KRBA1A5PL33 1030 aa4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 H3BM21 787 aa4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 GPR39O43194 453 aa4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 EFCAB14O75071 495 aa4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 LRIG2O94898 1065 aa4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 ADAMTS2O95450 1211 aa4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 ASLP04424 464 aa4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 SNRPB2P08579 225 aaKnown RBP4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 IGFALSP35858 605 aa4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 ASPAP45381 313 aa4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 ID4P47928 161 aa4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 RAB27AP51159 221 aa4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 GFRA1P56159 465 aa4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 ZNF445P59923 1031 aa4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 RNF4P78317 190 aa4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 TMPRSS15P98073 1019 aa4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 KRT76Q01546 638 aa4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 SOX4Q06945 474 aaPredicted RBP4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 SNW1Q13573 536 aaKnown RBP4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 SKOR2Q2VWA4 1001 aaPredicted RBP4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 NOL9Q5SY16 702 aaKnown RBP4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 TRAPPC3LQ5T215 181 aa4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 GORABQ5T7V8 394 aa4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 POMZP3Q6PJE2 187 aa4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 USP53Q70EK8 1073 aa4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 NECAB2Q7Z6G3 386 aa4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 CDH24Q86UP0 819 aa4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 CCAR1Q8IX12 1150 aaKnown RBP4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 SMYD4Q8IYR2 804 aaPredicted RBP4.36□□□□□ -1.71
SCARNA15.2-201ENST00000516409 ARHGEF39Q8N4T4 335 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms