RNA–Protein interactions for RNA: ENST00000515996.1

SCARNA21.1-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.1-201ENST00000515996 A6NJR5 290 aa0.69□□□□□ -2.3
SCARNA21.1-201ENST00000515996 KRTAP4-16G5E9R7 235 aaPredicted RBP0.69□□□□□ -2.3
SCARNA21.1-201ENST00000515996 PIK3CDO00329 1044 aa0.69□□□□□ -2.3
SCARNA21.1-201ENST00000515996 NRDCO43847 1150 aa0.69□□□□□ -2.3
SCARNA21.1-201ENST00000515996 MC3RP41968 323 aa0.69□□□□□ -2.3
SCARNA21.1-201ENST00000515996 EPHB4P54760 987 aa0.69□□□□□ -2.3
SCARNA21.1-201ENST00000515996 C9orf131Q5VYM1 1079 aa0.69□□□□□ -2.3
SCARNA21.1-201ENST00000515996 LRFN4Q6PJG9 635 aa0.69□□□□□ -2.3
SCARNA21.1-201ENST00000515996 TTLL7Q6ZT98 887 aa0.69□□□□□ -2.3
SCARNA21.1-201ENST00000515996 HDXQ7Z353 690 aa0.69□□□□□ -2.3
SCARNA21.1-201ENST00000515996 C1orf210Q8IVY1 113 aa0.69□□□□□ -2.3
SCARNA21.1-201ENST00000515996 RNF214Q8ND24 703 aa0.69□□□□□ -2.3
SCARNA21.1-201ENST00000515996 MYO19Q96H55 970 aa0.69□□□□□ -2.3
SCARNA21.1-201ENST00000515996 PLCD4Q9BRC7 762 aa0.69□□□□□ -2.3
SCARNA21.1-201ENST00000515996 SLC29A3Q9BZD2 475 aa0.69□□□□□ -2.3
SCARNA21.1-201ENST00000515996 CLEC4MQ9H2X3 399 aaPredicted RBP0.69□□□□□ -2.3
SCARNA21.1-201ENST00000515996 IGSF5Q9NSI5 407 aa0.69□□□□□ -2.3
SCARNA21.1-201ENST00000515996 TMEM63CQ9P1W3 806 aa0.69□□□□□ -2.3
SCARNA21.1-201ENST00000515996 ZNF112Q9UJU3 913 aa0.69□□□□□ -2.3
SCARNA21.1-201ENST00000515996 FRMD4BQ9Y2L6 1034 aa0.69□□□□□ -2.3
SCARNA21.1-201ENST00000515996 NDUFB9Q9Y6M9 179 aa0.69□□□□□ -2.3
SCARNA21.1-201ENST00000515996 A0A1W2PP55 124 aa0.68□□□□□ -2.3
SCARNA21.1-201ENST00000515996 SUSD5O60279 629 aa0.68□□□□□ -2.3
SCARNA21.1-201ENST00000515996 GAS8-AS1O95177 125 aa0.68□□□□□ -2.3
SCARNA21.1-201ENST00000515996 GCP02774 474 aa0.68□□□□□ -2.3
SCARNA21.1-201ENST00000515996 CES1P23141 567 aa0.68□□□□□ -2.3
SCARNA21.1-201ENST00000515996 NTF4P34130 210 aa0.68□□□□□ -2.3
SCARNA21.1-201ENST00000515996 ZNF81P51508 661 aa0.68□□□□□ -2.3
SCARNA21.1-201ENST00000515996 HYAL1Q12794 435 aa0.68□□□□□ -2.3
SCARNA21.1-201ENST00000515996 NCOA4Q13772 614 aa0.68□□□□□ -2.3
SCARNA21.1-201ENST00000515996 CBX2Q14781 532 aaPredicted RBP0.68□□□□□ -2.3
SCARNA21.1-201ENST00000515996 SLC14A2Q15849 920 aa0.68□□□□□ -2.3
SCARNA21.1-201ENST00000515996 FAM26FQ5R3K3 315 aa0.68□□□□□ -2.3
SCARNA21.1-201ENST00000515996 STRIP1Q5VSL9 837 aa0.68□□□□□ -2.3
SCARNA21.1-201ENST00000515996 RD3Q7Z3Z2 195 aa0.68□□□□□ -2.3
SCARNA21.1-201ENST00000515996 HDGFL2Q7Z4V5 671 aaPredicted RBP0.68□□□□□ -2.3
SCARNA21.1-201ENST00000515996 ETFBKMTQ8IXQ9 262 aa0.68□□□□□ -2.3
SCARNA21.1-201ENST00000515996 IL17DQ8TAD2 202 aa0.68□□□□□ -2.3
SCARNA21.1-201ENST00000515996 ZBTB9Q96C00 473 aa0.68□□□□□ -2.3
SCARNA21.1-201ENST00000515996 ZC3H12CQ9C0D7 883 aaKnown RBP0.68□□□□□ -2.3
SCARNA21.1-201ENST00000515996 DUSP15Q9H1R2 295 aaPredicted RBP0.68□□□□□ -2.3
SCARNA21.1-201ENST00000515996 JADE2Q9NQC1 790 aa0.68□□□□□ -2.3
SCARNA21.1-201ENST00000515996 UTP3Q9NQZ2 479 aaKnown RBP eCLIP0.68□□□□□ -2.3
SCARNA21.1-201ENST00000515996 FNDC3AQ9Y2H6 1198 aaKnown RBP0.68□□□□□ -2.3
SCARNA21.1-201ENST00000515996 REXO2Q9Y3B8 237 aaKnown RBP0.68□□□□□ -2.3
SCARNA21.1-201ENST00000515996 COX11Q9Y6N1 276 aa0.68□□□□□ -2.3
SCARNA21.1-201ENST00000515996 TRIM66O15016 1216 aa0.67□□□□□ -2.3
SCARNA21.1-201ENST00000515996 TEKQ02763 1124 aa0.67□□□□□ -2.3
SCARNA21.1-201ENST00000515996 KIR3DS1Q14943 382 aa0.67□□□□□ -2.3
SCARNA21.1-201ENST00000515996 KRTAP21-2Q3LI59 83 aa0.67□□□□□ -2.3
SCARNA21.1-201ENST00000515996 SH3D19Q5HYK7 790 aa0.67□□□□□ -2.3
SCARNA21.1-201ENST00000515996 SLFN13Q68D06 897 aa0.67□□□□□ -2.3
SCARNA21.1-201ENST00000515996 ZC3H14Q6PJT7 736 aaKnown RBP0.67□□□□□ -2.3
SCARNA21.1-201ENST00000515996 CEP128Q6ZU80 1094 aa0.67□□□□□ -2.3
SCARNA21.1-201ENST00000515996 DDX54Q8TDD1 881 aaKnown RBP0.67□□□□□ -2.3
SCARNA21.1-201ENST00000515996 PIK3R5Q8WYR1 880 aa0.67□□□□□ -2.3
SCARNA21.1-201ENST00000515996 ZNF778Q96MU6 729 aa0.67□□□□□ -2.3
SCARNA21.1-201ENST00000515996 NOX5Q96PH1 765 aa0.67□□□□□ -2.3
SCARNA21.1-201ENST00000515996 MIPEPQ99797 713 aa0.67□□□□□ -2.3
SCARNA21.1-201ENST00000515996 C1QTNF7Q9BXJ2 289 aa0.67□□□□□ -2.3
SCARNA21.1-201ENST00000515996 MEGF9Q9H1U4 602 aa0.67□□□□□ -2.3
SCARNA21.1-201ENST00000515996 R3HDMLQ9H3Y0 253 aa0.67□□□□□ -2.3
SCARNA21.1-201ENST00000515996 ZNF768Q9H5H4 540 aaKnown RBP0.67□□□□□ -2.3
SCARNA21.1-201ENST00000515996 ELP3Q9H9T3 547 aa0.67□□□□□ -2.3
SCARNA21.1-201ENST00000515996 FOXS1O43638 330 aa0.66□□□□□ -2.3
SCARNA21.1-201ENST00000515996 KRT86O43790 486 aa0.66□□□□□ -2.3
SCARNA21.1-201ENST00000515996 LRIG2O94898 1065 aa0.66□□□□□ -2.3
SCARNA21.1-201ENST00000515996 RHOBTB3O94955 611 aa0.66□□□□□ -2.3
SCARNA21.1-201ENST00000515996 B3GALT4O96024 378 aa0.66□□□□□ -2.3
SCARNA21.1-201ENST00000515996 TKTP29401 623 aaKnown RBP0.66□□□□□ -2.3
SCARNA21.1-201ENST00000515996 ARL4AP40617 200 aa0.66□□□□□ -2.3
SCARNA21.1-201ENST00000515996 KIR3DL1P43629 444 aa0.66□□□□□ -2.3
SCARNA21.1-201ENST00000515996 MAPKAPK2P49137 400 aa0.66□□□□□ -2.3
SCARNA21.1-201ENST00000515996 ERVK-24P63145 666 aa0.66□□□□□ -2.3
SCARNA21.1-201ENST00000515996 CLDN10P78369 228 aa0.66□□□□□ -2.3
SCARNA21.1-201ENST00000515996 AP3B2Q13367 1082 aa0.66□□□□□ -2.3
SCARNA21.1-201ENST00000515996 KRT81Q14533 505 aa0.66□□□□□ -2.3
SCARNA21.1-201ENST00000515996 ZNF628Q5EBL2 1059 aa0.66□□□□□ -2.3
SCARNA21.1-201ENST00000515996 MCTP2Q6DN12 878 aa0.66□□□□□ -2.3
SCARNA21.1-201ENST00000515996 BARGINQ6ZT62 677 aa0.66□□□□□ -2.3
SCARNA21.1-201ENST00000515996 B3GNT8Q7Z7M8 397 aa0.66□□□□□ -2.3
SCARNA21.1-201ENST00000515996 TRIM50Q86XT4 487 aa0.66□□□□□ -2.3
SCARNA21.1-201ENST00000515996 ZSCAN29Q8IWY8 852 aaPredicted RBP0.66□□□□□ -2.3
SCARNA21.1-201ENST00000515996 ANKS1AQ92625 1134 aa0.66□□□□□ -2.3
SCARNA21.1-201ENST00000515996 EDAQ92838 391 aa0.66□□□□□ -2.3
SCARNA21.1-201ENST00000515996 RNF38Q9H0F5 515 aa0.66□□□□□ -2.3
SCARNA21.1-201ENST00000515996 TRIT1Q9H3H1 467 aaKnown RBP0.66□□□□□ -2.3
SCARNA21.1-201ENST00000515996 TNFRSF12AQ9NP84 129 aa0.66□□□□□ -2.3
SCARNA21.1-201ENST00000515996 MTMR4Q9NYA4 1195 aa0.66□□□□□ -2.3
SCARNA21.1-201ENST00000515996 TULP1O00294 542 aaPredicted RBP0.65□□□□□ -2.31
SCARNA21.1-201ENST00000515996 LGR5O75473 907 aa0.65□□□□□ -2.31
SCARNA21.1-201ENST00000515996 MT3P25713 68 aa0.65□□□□□ -2.31
SCARNA21.1-201ENST00000515996 GJA4P35212 333 aa0.65□□□□□ -2.31
SCARNA21.1-201ENST00000515996 PPP2CBP62714 309 aa0.65□□□□□ -2.31
SCARNA21.1-201ENST00000515996 PPP2CAP67775 309 aa0.65□□□□□ -2.31
SCARNA21.1-201ENST00000515996 FOXF2Q12947 444 aa0.65□□□□□ -2.31
SCARNA21.1-201ENST00000515996 SMAD4Q13485 552 aaKnown RBP0.65□□□□□ -2.31
SCARNA21.1-201ENST00000515996 FHL1Q13642 323 aa0.65□□□□□ -2.31
SCARNA21.1-201ENST00000515996 COL9A2Q14055 689 aaPredicted RBP0.65□□□□□ -2.31
SCARNA21.1-201ENST00000515996 ZC3H12AQ5D1E8 599 aaKnown RBP0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms