RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 TDRD3Q9H7E2 651 aaKnown RBP17.7■□□□□ 0.42
THUMPD3-210ENST00000515662 BARHL2Q9NY43 387 aa17.7■□□□□ 0.42
THUMPD3-210ENST00000515662 PI4KBQ9UBF8 816 aa17.7■□□□□ 0.42
THUMPD3-210ENST00000515662 CLIP2Q9UDT6 1046 aa17.7■□□□□ 0.42
THUMPD3-210ENST00000515662 PCDHA4Q9UN74 947 aa17.7■□□□□ 0.42
THUMPD3-210ENST00000515662 GREB1LQ9C091 1923 aaPredicted RBP17.7■□□□□ 0.42
THUMPD3-210ENST00000515662 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.69■□□□□ 0.42
THUMPD3-210ENST00000515662 STXBP3O00186 592 aa17.69■□□□□ 0.42
THUMPD3-210ENST00000515662 WNT7AO00755 349 aa17.69■□□□□ 0.42
THUMPD3-210ENST00000515662 EIF6P56537 245 aaKnown RBP17.69■□□□□ 0.42
THUMPD3-210ENST00000515662 HEATR3Q7Z4Q2 680 aa17.69■□□□□ 0.42
THUMPD3-210ENST00000515662 FAM177A1Q8N128 213 aaPredicted RBP17.69■□□□□ 0.42
THUMPD3-210ENST00000515662 LRRC47Q8N1G4 583 aaKnown RBP17.69■□□□□ 0.42
THUMPD3-210ENST00000515662 ERCC4Q92889 916 aaPredicted RBP17.69■□□□□ 0.42
THUMPD3-210ENST00000515662 PRMT6Q96LA8 375 aaPredicted RBP17.69■□□□□ 0.42
THUMPD3-210ENST00000515662 CCDC17Q96LX7 622 aa17.69■□□□□ 0.42
THUMPD3-210ENST00000515662 VPS33BQ9H267 617 aa17.69■□□□□ 0.42
THUMPD3-210ENST00000515662 KIAA1468Q9P260 1216 aa17.69■□□□□ 0.42
THUMPD3-210ENST00000515662 RAD17O75943 681 aa17.69■□□□□ 0.42
THUMPD3-210ENST00000515662 BMP15O95972 392 aa17.69■□□□□ 0.42
THUMPD3-210ENST00000515662 VIL1P09327 827 aaKnown RBP17.69■□□□□ 0.42
THUMPD3-210ENST00000515662 SNHG28P0DPA3 235 aa17.69■□□□□ 0.42
THUMPD3-210ENST00000515662 ZNF165P49910 485 aa17.69■□□□□ 0.42
THUMPD3-210ENST00000515662 TGFB2P61812 414 aa17.69■□□□□ 0.42
THUMPD3-210ENST00000515662 TTC38Q5R3I4 469 aa17.69■□□□□ 0.42
THUMPD3-210ENST00000515662 PIK3AP1Q6ZUJ8 805 aa17.69■□□□□ 0.42
THUMPD3-210ENST00000515662 CCDC148Q8NFR7 591 aa17.69■□□□□ 0.42
THUMPD3-210ENST00000515662 KCNH3Q9ULD8 1083 aa17.69■□□□□ 0.42
THUMPD3-210ENST00000515662 TRAPPC10P48553 1259 aa17.68■□□□□ 0.42
THUMPD3-210ENST00000515662 SOGA3Q5TF21 947 aa17.68■□□□□ 0.42
THUMPD3-210ENST00000515662 ZSCAN29Q8IWY8 852 aaPredicted RBP17.68■□□□□ 0.42
THUMPD3-210ENST00000515662 GMLQ99445 158 aa17.68■□□□□ 0.42
THUMPD3-210ENST00000515662 PIM2Q9P1W9 311 aa17.68■□□□□ 0.42
THUMPD3-210ENST00000515662 M0R2N6 131 aa17.68■□□□□ 0.42
THUMPD3-210ENST00000515662 PSMD14O00487 310 aa17.68■□□□□ 0.42
THUMPD3-210ENST00000515662 MPHOSPH10O00566 681 aaKnown RBP17.68■□□□□ 0.42
THUMPD3-210ENST00000515662 ADCY5O95622 1261 aa17.68■□□□□ 0.42
THUMPD3-210ENST00000515662 PRKCSHP14314 528 aaPredicted RBP17.68■□□□□ 0.42
THUMPD3-210ENST00000515662 ASPRV1Q53RT3 343 aa17.68■□□□□ 0.42
THUMPD3-210ENST00000515662 HS1BP3Q53T59 392 aa17.68■□□□□ 0.42
THUMPD3-210ENST00000515662 SPECC1Q5M775 1068 aa17.68■□□□□ 0.42
THUMPD3-210ENST00000515662 GALNT17Q6IS24 598 aa17.68■□□□□ 0.42
THUMPD3-210ENST00000515662 C11orf57Q6ZUT1 292 aaPredicted RBP17.68■□□□□ 0.42
THUMPD3-210ENST00000515662 DAGLBQ8NCG7 672 aa17.68■□□□□ 0.42
THUMPD3-210ENST00000515662 RRP36Q96EU6 259 aaKnown RBP17.68■□□□□ 0.42
THUMPD3-210ENST00000515662 ANO10Q9NW15 660 aa17.68■□□□□ 0.42
THUMPD3-210ENST00000515662 ATF5Q9Y2D1 282 aaPredicted RBP17.68■□□□□ 0.42
THUMPD3-210ENST00000515662 FAM196BA6NMK8 535 aa17.67■□□□□ 0.42
THUMPD3-210ENST00000515662 AP5Z1O43299 807 aa17.67■□□□□ 0.42
THUMPD3-210ENST00000515662 ENTPD3O75355 529 aa17.67■□□□□ 0.42
THUMPD3-210ENST00000515662 ZNF174Q15697 407 aa17.67■□□□□ 0.42
THUMPD3-210ENST00000515662 FOXP4Q8IVH2 680 aaPredicted RBP17.67■□□□□ 0.42
THUMPD3-210ENST00000515662 RIOX1Q9H6W3 641 aa17.67■□□□□ 0.42
THUMPD3-210ENST00000515662 FRMPD2Q68DX3 1309 aaPredicted RBP17.67■□□□□ 0.42
THUMPD3-210ENST00000515662 ATRNL1Q5VV63 1379 aa17.67■□□□□ 0.42
THUMPD3-210ENST00000515662 TATDN1Q6P1N9 297 aa17.67■□□□□ 0.42
THUMPD3-210ENST00000515662 UBA5Q9GZZ9 404 aa17.67■□□□□ 0.42
THUMPD3-210ENST00000515662 FAM13BQ9NYF5 915 aa17.67■□□□□ 0.42
THUMPD3-210ENST00000515662 A0A087WWV3 80 aa17.66■□□□□ 0.42
THUMPD3-210ENST00000515662 LONRF3Q496Y0 759 aa17.66■□□□□ 0.42
THUMPD3-210ENST00000515662 PPP4R3BQ5MIZ7 849 aa17.66■□□□□ 0.42
THUMPD3-210ENST00000515662 METTL16Q86W50 562 aaKnown RBP17.66■□□□□ 0.42
THUMPD3-210ENST00000515662 MTFR1LQ9H019 292 aa17.66■□□□□ 0.42
THUMPD3-210ENST00000515662 CSRNP2Q9H175 543 aa17.66■□□□□ 0.42
THUMPD3-210ENST00000515662 ZNRF3Q9ULT6 936 aa17.66■□□□□ 0.42
THUMPD3-210ENST00000515662 COL2A1P02458 1487 aaPredicted RBP17.66■□□□□ 0.42
THUMPD3-210ENST00000515662 SPDYE2BA6NHP3 402 aa17.66■□□□□ 0.42
THUMPD3-210ENST00000515662 SPDYE6P0CI01 402 aa17.66■□□□□ 0.42
THUMPD3-210ENST00000515662 POLD1P28340 1107 aa17.66■□□□□ 0.42
THUMPD3-210ENST00000515662 IQCB1Q15051 598 aa17.66■□□□□ 0.42
THUMPD3-210ENST00000515662 CERKLQ49MI3 558 aaPredicted RBP17.66■□□□□ 0.42
THUMPD3-210ENST00000515662 KRBA2Q6ZNG9 492 aa17.66■□□□□ 0.42
THUMPD3-210ENST00000515662 HOMER1Q86YM7 354 aa17.66■□□□□ 0.42
THUMPD3-210ENST00000515662 FERMT2Q96AC1 680 aa17.66■□□□□ 0.42
THUMPD3-210ENST00000515662 PIGSQ96S52 555 aa17.66■□□□□ 0.42
THUMPD3-210ENST00000515662 TRIM34Q9BYJ4 488 aa17.66■□□□□ 0.42
THUMPD3-210ENST00000515662 VAT1LQ9HCJ6 419 aa17.66■□□□□ 0.42
THUMPD3-210ENST00000515662 SEC63Q9UGP8 760 aaKnown RBP17.66■□□□□ 0.42
THUMPD3-210ENST00000515662 PCDHA6Q9UN73 950 aa17.66■□□□□ 0.42
THUMPD3-210ENST00000515662 PCDHA8Q9Y5H6 950 aa17.66■□□□□ 0.42
THUMPD3-210ENST00000515662 GOLGB1Q14789 3259 aaKnown RBP17.66■□□□□ 0.42
THUMPD3-210ENST00000515662 ZNF543Q08ER8 600 aa17.65■□□□□ 0.42
THUMPD3-210ENST00000515662 NIM1KQ8IY84 436 aa17.65■□□□□ 0.42
THUMPD3-210ENST00000515662 RASGRP4Q8TDF6 673 aa17.65■□□□□ 0.42
THUMPD3-210ENST00000515662 ZMYND12Q9H0C1 365 aa17.65■□□□□ 0.42
THUMPD3-210ENST00000515662 ATP2C1P98194 919 aaPredicted RBP17.65■□□□□ 0.42
THUMPD3-210ENST00000515662 PLCB2Q00722 1185 aa17.65■□□□□ 0.42
THUMPD3-210ENST00000515662 CCDC12Q8WUD4 166 aaPredicted RBP17.65■□□□□ 0.42
THUMPD3-210ENST00000515662 HDAC9Q9UKV0 1011 aa17.65■□□□□ 0.42
THUMPD3-210ENST00000515662 NAPAP54920 295 aa17.64■□□□□ 0.41
THUMPD3-210ENST00000515662 ATP2B2Q01814 1243 aa17.64■□□□□ 0.41
THUMPD3-210ENST00000515662 PTGDRQ13258 359 aa17.64■□□□□ 0.41
THUMPD3-210ENST00000515662 SHROOM1Q2M3G4 852 aaPredicted RBP17.64■□□□□ 0.41
THUMPD3-210ENST00000515662 DALRD3Q5D0E6 543 aaKnown RBP17.64■□□□□ 0.41
THUMPD3-210ENST00000515662 ELOA2Q8IYF1 753 aaPredicted RBP17.64■□□□□ 0.41
THUMPD3-210ENST00000515662 GPCPD1Q9NPB8 672 aa17.64■□□□□ 0.41
THUMPD3-210ENST00000515662 ZBTB12Q9Y330 459 aaPredicted RBP17.64■□□□□ 0.41
THUMPD3-210ENST00000515662 CCDC194A0A1B0GVG4 234 aa17.64■□□□□ 0.41
THUMPD3-210ENST00000515662 USP49Q70CQ1 688 aa17.64■□□□□ 0.41
THUMPD3-210ENST00000515662 CEP57L1Q8IYX8 460 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms