RNA–Protein interactions for RNA: ENST00000515546.1

HMGCLL1-209, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 4

Gene HMGCLL1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-209ENST00000515546 TSPY8P0CW00 308 aa17.61■□□□□ 0.41
HMGCLL1-209ENST00000515546 GSPT1P15170 499 aaKnown RBP17.61■□□□□ 0.41
HMGCLL1-209ENST00000515546 RGS2P41220 211 aa17.61■□□□□ 0.41
HMGCLL1-209ENST00000515546 MFAP1P55081 439 aaKnown RBP17.61■□□□□ 0.41
HMGCLL1-209ENST00000515546 TFAP4Q01664 338 aa17.61■□□□□ 0.41
HMGCLL1-209ENST00000515546 CTDSPL2Q05D32 466 aa17.61■□□□□ 0.41
HMGCLL1-209ENST00000515546 KLRC3Q07444 240 aa17.61■□□□□ 0.41
HMGCLL1-209ENST00000515546 GRB14Q14449 540 aa17.61■□□□□ 0.41
HMGCLL1-209ENST00000515546 FAM47AQ5JRC9 791 aa17.61■□□□□ 0.41
HMGCLL1-209ENST00000515546 FAM83BQ5T0W9 1011 aa17.61■□□□□ 0.41
HMGCLL1-209ENST00000515546 MAP3K21Q5TCX8 1036 aa17.61■□□□□ 0.41
HMGCLL1-209ENST00000515546 CCAR1Q8IX12 1150 aaKnown RBP17.61■□□□□ 0.41
HMGCLL1-209ENST00000515546 TRMT44Q8IYL2 757 aaKnown RBP17.61■□□□□ 0.41
HMGCLL1-209ENST00000515546 GMCL1P1Q8NEA9 526 aa17.61■□□□□ 0.41
HMGCLL1-209ENST00000515546 FBXO28Q9NVF7 368 aa17.61■□□□□ 0.41
HMGCLL1-209ENST00000515546 CLIP2Q9UDT6 1046 aa17.61■□□□□ 0.41
HMGCLL1-209ENST00000515546 PPP1R9AQ9ULJ8 1098 aa17.61■□□□□ 0.41
HMGCLL1-209ENST00000515546 LAMA4Q16363 1823 aa17.61■□□□□ 0.41
HMGCLL1-209ENST00000515546 HOXC6P09630 235 aa17.6■□□□□ 0.41
HMGCLL1-209ENST00000515546 CYP2B6P20813 491 aa17.6■□□□□ 0.41
HMGCLL1-209ENST00000515546 PTPREP23469 700 aa17.6■□□□□ 0.41
HMGCLL1-209ENST00000515546 NOVP48745 357 aa17.6■□□□□ 0.41
HMGCLL1-209ENST00000515546 MAP2K5Q13163 448 aa17.6■□□□□ 0.41
HMGCLL1-209ENST00000515546 TTC22Q5TAA0 569 aa17.6■□□□□ 0.41
HMGCLL1-209ENST00000515546 UBE2Q1Q7Z7E8 422 aa17.6■□□□□ 0.41
HMGCLL1-209ENST00000515546 NBPF3Q9H094 633 aa17.6■□□□□ 0.41
HMGCLL1-209ENST00000515546 DIAPH3Q9NSV4 1193 aa17.6■□□□□ 0.41
HMGCLL1-209ENST00000515546 MYH4Q9Y623 1939 aa17.6■□□□□ 0.41
HMGCLL1-209ENST00000515546 ZKSCAN1P17029 563 aaPredicted RBP17.59■□□□□ 0.41
HMGCLL1-209ENST00000515546 TRIM32Q13049 653 aa17.59■□□□□ 0.41
HMGCLL1-209ENST00000515546 TMEM132BQ14DG7 1078 aa17.59■□□□□ 0.41
HMGCLL1-209ENST00000515546 PPP4R3BQ5MIZ7 849 aa17.59■□□□□ 0.41
HMGCLL1-209ENST00000515546 LRRC47Q8N1G4 583 aaKnown RBP17.59■□□□□ 0.41
HMGCLL1-209ENST00000515546 REPS2Q8NFH8 660 aa17.59■□□□□ 0.41
HMGCLL1-209ENST00000515546 U2AF1L4Q8WU68 220 aaKnown RBP17.59■□□□□ 0.41
HMGCLL1-209ENST00000515546 NUP88Q99567 741 aaPredicted RBP17.59■□□□□ 0.41
HMGCLL1-209ENST00000515546 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.59■□□□□ 0.41
HMGCLL1-209ENST00000515546 CWC22Q9HCG8 908 aaKnown RBP17.59■□□□□ 0.41
HMGCLL1-209ENST00000515546 INCENPQ9NQS7 918 aa17.59■□□□□ 0.41
HMGCLL1-209ENST00000515546 VWA5AO00534 786 aa17.58■□□□□ 0.4
HMGCLL1-209ENST00000515546 IGHA2P01877 340 aa17.58■□□□□ 0.4
HMGCLL1-209ENST00000515546 CAPN2P17655 700 aa17.58■□□□□ 0.4
HMGCLL1-209ENST00000515546 ERCC3P19447 782 aa17.58■□□□□ 0.4
HMGCLL1-209ENST00000515546 CWC27Q6UX04 472 aaKnown RBP17.58■□□□□ 0.4
HMGCLL1-209ENST00000515546 SLF1Q9BQI6 1058 aa17.58■□□□□ 0.4
HMGCLL1-209ENST00000515546 CRISPLD2Q9H0B8 497 aa17.58■□□□□ 0.4
HMGCLL1-209ENST00000515546 MROH8Q9H579 483 aa17.58■□□□□ 0.4
HMGCLL1-209ENST00000515546 IL17RBQ9NRM6 502 aa17.58■□□□□ 0.4
HMGCLL1-209ENST00000515546 ZNF214Q9UL59 606 aaPredicted RBP17.58■□□□□ 0.4
HMGCLL1-209ENST00000515546 RPTORQ8N122 1335 aa17.57■□□□□ 0.4
HMGCLL1-209ENST00000515546 COL11A1P12107 1806 aaPredicted RBP17.57■□□□□ 0.4
HMGCLL1-209ENST00000515546 TSPY2A6NKD2 308 aa17.57■□□□□ 0.4
HMGCLL1-209ENST00000515546 RAD21O60216 631 aa17.57■□□□□ 0.4
HMGCLL1-209ENST00000515546 SGPL1O95470 568 aa17.57■□□□□ 0.4
HMGCLL1-209ENST00000515546 PCP11498 1178 aaKnown RBP17.57■□□□□ 0.4
HMGCLL1-209ENST00000515546 CCL14Q16627 93 aa17.57■□□□□ 0.4
HMGCLL1-209ENST00000515546 WDR78Q5VTH9 848 aa17.57■□□□□ 0.4
HMGCLL1-209ENST00000515546 ABRAQ8N0Z2 381 aa17.57■□□□□ 0.4
HMGCLL1-209ENST00000515546 GMCL1Q96IK5 515 aa17.57■□□□□ 0.4
HMGCLL1-209ENST00000515546 IVNS1ABPQ9Y6Y0 642 aa17.57■□□□□ 0.4
HMGCLL1-209ENST00000515546 STRNO43815 780 aa17.56■□□□□ 0.4
HMGCLL1-209ENST00000515546 PRKAR2AP13861 404 aaKnown RBP17.56■□□□□ 0.4
HMGCLL1-209ENST00000515546 PRPF38BQ5VTL8 546 aaKnown RBP17.56■□□□□ 0.4
HMGCLL1-209ENST00000515546 RIOX2Q8IUF8 465 aa17.56■□□□□ 0.4
HMGCLL1-209ENST00000515546 TBC1D10CQ8IV04 446 aa17.56■□□□□ 0.4
HMGCLL1-209ENST00000515546 STAG1Q8WVM7 1258 aa17.56■□□□□ 0.4
HMGCLL1-209ENST00000515546 DEFB118Q96PH6 123 aa17.56■□□□□ 0.4
HMGCLL1-209ENST00000515546 FLRT1Q9NZU1 646 aa17.56■□□□□ 0.4
HMGCLL1-209ENST00000515546 RAD50Q92878 1312 aa17.55■□□□□ 0.4
HMGCLL1-209ENST00000515546 RANBP6O60518 1105 aaKnown RBP17.55■□□□□ 0.4
HMGCLL1-209ENST00000515546 NMT2O60551 498 aa17.55■□□□□ 0.4
HMGCLL1-209ENST00000515546 SLC25A27O95847 323 aa17.55■□□□□ 0.4
HMGCLL1-209ENST00000515546 ADORA2AP29274 412 aa17.55■□□□□ 0.4
HMGCLL1-209ENST00000515546 COPB2P35606 906 aa17.55■□□□□ 0.4
HMGCLL1-209ENST00000515546 HAND2P61296 217 aa17.55■□□□□ 0.4
HMGCLL1-209ENST00000515546 PLS1Q14651 629 aa17.55■□□□□ 0.4
HMGCLL1-209ENST00000515546 SLFN13Q68D06 897 aa17.55■□□□□ 0.4
HMGCLL1-209ENST00000515546 PRPF38AQ8NAV1 312 aaKnown RBP17.55■□□□□ 0.4
HMGCLL1-209ENST00000515546 DSCC1Q9BVC3 393 aa17.55■□□□□ 0.4
HMGCLL1-209ENST00000515546 IL25Q9H293 177 aa17.55■□□□□ 0.4
HMGCLL1-209ENST00000515546 HMX1Q9NP08 348 aaPredicted RBP17.55■□□□□ 0.4
HMGCLL1-209ENST00000515546 FEM1BQ9UK73 627 aa17.55■□□□□ 0.4
HMGCLL1-209ENST00000515546 ATP2A1O14983 1001 aa17.54■□□□□ 0.4
HMGCLL1-209ENST00000515546 BMP3P12645 472 aa17.54■□□□□ 0.4
HMGCLL1-209ENST00000515546 NT5C2P49902 561 aa17.54■□□□□ 0.4
HMGCLL1-209ENST00000515546 CACNB2Q08289 660 aaPredicted RBP17.54■□□□□ 0.4
HMGCLL1-209ENST00000515546 AKNAD1Q5T1N1 836 aa17.54■□□□□ 0.4
HMGCLL1-209ENST00000515546 SAMD1Q6SPF0 538 aaPredicted RBP17.54■□□□□ 0.4
HMGCLL1-209ENST00000515546 NCAPG2Q86XI2 1143 aa17.54■□□□□ 0.4
HMGCLL1-209ENST00000515546 NPLOC4Q8TAT6 608 aa17.54■□□□□ 0.4
HMGCLL1-209ENST00000515546 TEX13BQ9BXU2 312 aa17.54■□□□□ 0.4
HMGCLL1-209ENST00000515546 TCP11L1Q9NUJ3 509 aa17.54■□□□□ 0.4
HMGCLL1-209ENST00000515546 STX8Q9UNK0 236 aa17.54■□□□□ 0.4
HMGCLL1-209ENST00000515546 FARP2O94887 1054 aaPredicted RBP17.53■□□□□ 0.4
HMGCLL1-209ENST00000515546 STAT3P40763 770 aa17.53■□□□□ 0.4
HMGCLL1-209ENST00000515546 OLFML2BQ68BL8 750 aa17.53■□□□□ 0.4
HMGCLL1-209ENST00000515546 RNF41Q9H4P4 317 aaPredicted RBP17.53■□□□□ 0.4
HMGCLL1-209ENST00000515546 SLC38A10Q9HBR0 1119 aa17.53■□□□□ 0.4
HMGCLL1-209ENST00000515546 NEDD4P46934 1319 aa17.52■□□□□ 0.4
HMGCLL1-209ENST00000515546 PLA2G6O60733 806 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms