RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 CCDC17Q96LX7 622 aa19.02■□□□□ 0.64
LMNA-223ENST00000515459 ARMT1Q9H993 441 aa19.02■□□□□ 0.64
LMNA-223ENST00000515459 XPNPEP3Q9NQH7 507 aa19.02■□□□□ 0.64
LMNA-223ENST00000515459 PHF24Q9UPV7 400 aa19.02■□□□□ 0.64
LMNA-223ENST00000515459 TACC3Q9Y6A5 838 aa19.02■□□□□ 0.64
LMNA-223ENST00000515459 TLE2Q04725 743 aa19.01■□□□□ 0.63
LMNA-223ENST00000515459 TMEM132BQ14DG7 1078 aa19.01■□□□□ 0.63
LMNA-223ENST00000515459 MMP19Q99542 508 aa19.01■□□□□ 0.63
LMNA-223ENST00000515459 ATP8A2Q9NTI2 1148 aa19.01■□□□□ 0.63
LMNA-223ENST00000515459 IFIT2P09913 472 aaKnown RBP19■□□□□ 0.63
LMNA-223ENST00000515459 KCTD2Q14681 263 aa19■□□□□ 0.63
LMNA-223ENST00000515459 RNF180Q86T96 592 aa19■□□□□ 0.63
LMNA-223ENST00000515459 RIOX2Q8IUF8 465 aa19■□□□□ 0.63
LMNA-223ENST00000515459 AMOTL1Q8IY63 956 aa19■□□□□ 0.63
LMNA-223ENST00000515459 KIF1BPQ96EK5 621 aa19■□□□□ 0.63
LMNA-223ENST00000515459 TINF2Q9BSI4 451 aa19■□□□□ 0.63
LMNA-223ENST00000515459 TTYH1Q9H313 450 aaPredicted RBP19■□□□□ 0.63
LMNA-223ENST00000515459 ADAMTS5Q9UNA0 930 aa19■□□□□ 0.63
LMNA-223ENST00000515459 PRKAB2O43741 272 aa18.99■□□□□ 0.63
LMNA-223ENST00000515459 PGK2P07205 417 aa18.99■□□□□ 0.63
LMNA-223ENST00000515459 CLTBP09497 229 aa18.99■□□□□ 0.63
LMNA-223ENST00000515459 CDK8P49336 464 aa18.99■□□□□ 0.63
LMNA-223ENST00000515459 MYLIPQ8WY64 445 aa18.99■□□□□ 0.63
LMNA-223ENST00000515459 DIS3Q9Y2L1 958 aaKnown RBP18.99■□□□□ 0.63
LMNA-223ENST00000515459 ROBO3Q96MS0 1386 aa18.98■□□□□ 0.63
LMNA-223ENST00000515459 APBB1O00213 710 aa18.98■□□□□ 0.63
LMNA-223ENST00000515459 MBD4O95243 580 aa18.98■□□□□ 0.63
LMNA-223ENST00000515459 PGK1P00558 417 aa18.98■□□□□ 0.63
LMNA-223ENST00000515459 EEF2P13639 858 aaKnown RBP18.98■□□□□ 0.63
LMNA-223ENST00000515459 ITGB8P26012 769 aa18.98■□□□□ 0.63
LMNA-223ENST00000515459 ADD2P35612 726 aa18.98■□□□□ 0.63
LMNA-223ENST00000515459 C12orf60Q5U649 245 aa18.98■□□□□ 0.63
LMNA-223ENST00000515459 RNPC3Q96LT9 517 aaKnown RBP18.98■□□□□ 0.63
LMNA-223ENST00000515459 KANSL2Q9H9L4 492 aa18.98■□□□□ 0.63
LMNA-223ENST00000515459 PAG1Q9NWQ8 432 aa18.98■□□□□ 0.63
LMNA-223ENST00000515459 TMEM265A0A087WTH1 108 aa18.97■□□□□ 0.63
LMNA-223ENST00000515459 CYP2D7A0A087X1C5 515 aa18.97■□□□□ 0.63
LMNA-223ENST00000515459 A0A1W2PQ45 241 aaPredicted RBP18.97■□□□□ 0.63
LMNA-223ENST00000515459 A0A1W2PQY0 241 aa18.97■□□□□ 0.63
LMNA-223ENST00000515459 KIAA0355O15063 1070 aa18.97■□□□□ 0.63
LMNA-223ENST00000515459 AKR1A1P14550 325 aa18.97■□□□□ 0.63
LMNA-223ENST00000515459 RAG1P15918 1043 aa18.97■□□□□ 0.63
LMNA-223ENST00000515459 COPB2P35606 906 aa18.97■□□□□ 0.63
LMNA-223ENST00000515459 STAT3P40763 770 aa18.97■□□□□ 0.63
LMNA-223ENST00000515459 ZNF792Q3KQV3 632 aa18.97■□□□□ 0.63
LMNA-223ENST00000515459 C16orf86Q6ZW13 317 aa18.97■□□□□ 0.63
LMNA-223ENST00000515459 PANK1Q8TE04 598 aa18.97■□□□□ 0.63
LMNA-223ENST00000515459 DDRGK1Q96HY6 314 aa18.97■□□□□ 0.63
LMNA-223ENST00000515459 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.97■□□□□ 0.631e-9■□□□□ 8.6
LMNA-223ENST00000515459 GOPCQ9HD26 462 aa18.97■□□□□ 0.63
LMNA-223ENST00000515459 FBXO28Q9NVF7 368 aa18.97■□□□□ 0.63
LMNA-223ENST00000515459 MYH7P12883 1935 aa18.97■□□□□ 0.63
LMNA-223ENST00000515459 USP17L12C9JPN9 530 aa18.96■□□□□ 0.63
LMNA-223ENST00000515459 USP17L21D6R901 530 aa18.96■□□□□ 0.63
LMNA-223ENST00000515459 SMIM22K7EJ46 135 aa18.96■□□□□ 0.63
LMNA-223ENST00000515459 VWA5AO00534 786 aa18.96■□□□□ 0.63
LMNA-223ENST00000515459 PQBP1O60828 265 aaKnown RBP18.96■□□□□ 0.63
LMNA-223ENST00000515459 ZNF865P0CJ78 1059 aaPredicted RBP18.96■□□□□ 0.63
LMNA-223ENST00000515459 FOSL2P15408 326 aa18.96■□□□□ 0.63
LMNA-223ENST00000515459 TAL1P17542 331 aaPredicted RBP18.96■□□□□ 0.63
LMNA-223ENST00000515459 SLFNL1Q499Z3 407 aa18.96■□□□□ 0.63
LMNA-223ENST00000515459 BCL11AQ9H165 835 aa18.96■□□□□ 0.63
LMNA-223ENST00000515459 ZNF214Q9UL59 606 aaPredicted RBP18.96■□□□□ 0.63
LMNA-223ENST00000515459 PPP1R9AQ9ULJ8 1098 aa18.96■□□□□ 0.63
LMNA-223ENST00000515459 CNPY2Q9Y2B0 182 aa18.96■□□□□ 0.63
LMNA-223ENST00000515459 RAD21O60216 631 aa18.95■□□□□ 0.62
LMNA-223ENST00000515459 HMMRO75330 724 aa18.95■□□□□ 0.62
LMNA-223ENST00000515459 EPHB4P54760 987 aa18.95■□□□□ 0.62
LMNA-223ENST00000515459 HNRNPUQ00839 825 aaKnown RBP eCLIP18.95■□□□□ 0.62
LMNA-223ENST00000515459 FPGSQ05932 587 aa18.95■□□□□ 0.62
LMNA-223ENST00000515459 RPAP2Q8IXW5 612 aaPredicted RBP18.95■□□□□ 0.62
LMNA-223ENST00000515459 TSEN34Q9BSV6 310 aaKnown RBP18.95■□□□□ 0.62
LMNA-223ENST00000515459 BOLA2Q9H3K6 86 aa18.95■□□□□ 0.62
LMNA-223ENST00000515459 TMEM39AQ9NV64 488 aa18.95■□□□□ 0.62
LMNA-223ENST00000515459 EYSQ5T1H1 3165 aa18.94■□□□□ 0.62
LMNA-223ENST00000515459 FAM83BQ5T0W9 1011 aa18.94■□□□□ 0.62
LMNA-223ENST00000515459 TOX2Q96NM4 488 aa18.94■□□□□ 0.62
LMNA-223ENST00000515459 CDH23Q9H251 3354 aa18.93■□□□□ 0.62
LMNA-223ENST00000515459 DCDC2CA8MYV0 355 aa18.93■□□□□ 0.62
LMNA-223ENST00000515459 RAB11FIP3O75154 756 aa18.93■□□□□ 0.62
LMNA-223ENST00000515459 ADAMTS4O75173 837 aa18.93■□□□□ 0.62
LMNA-223ENST00000515459 ATP5JP18859 108 aa18.93■□□□□ 0.62
LMNA-223ENST00000515459 FAAP100Q0VG06 881 aa18.93■□□□□ 0.62
LMNA-223ENST00000515459 UBE3CQ15386 1083 aa18.93■□□□□ 0.62
LMNA-223ENST00000515459 ANKRD33Q7Z3H0 272 aa18.93■□□□□ 0.62
LMNA-223ENST00000515459 MSL3Q8N5Y2 521 aaKnown RBP18.93■□□□□ 0.62
LMNA-223ENST00000515459 REPS2Q8NFH8 660 aa18.93■□□□□ 0.62
LMNA-223ENST00000515459 NUP133Q8WUM0 1156 aa18.93■□□□□ 0.62
LMNA-223ENST00000515459 LENG1Q96BZ8 264 aaPredicted RBP18.93■□□□□ 0.62
LMNA-223ENST00000515459 STARD7Q9NQZ5 370 aa18.93■□□□□ 0.62
LMNA-223ENST00000515459 SLC4A4Q9Y6R1 1079 aa18.93■□□□□ 0.62
LMNA-223ENST00000515459 GREB1LQ9C091 1923 aaPredicted RBP18.92■□□□□ 0.62
LMNA-223ENST00000515459 VCANP13611 3396 aa18.92■□□□□ 0.62
LMNA-223ENST00000515459 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.92■□□□□ 0.62
LMNA-223ENST00000515459 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.92■□□□□ 0.62
LMNA-223ENST00000515459 ACLYP53396 1101 aa18.92■□□□□ 0.62
LMNA-223ENST00000515459 CTR9Q6PD62 1173 aa18.92■□□□□ 0.62
LMNA-223ENST00000515459 HAUS7Q99871 368 aa18.92■□□□□ 0.62
LMNA-223ENST00000515459 FAM184BQ9ULE4 1060 aa18.92■□□□□ 0.62
LMNA-223ENST00000515459 ZBED9Q6R2W3 1325 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms