RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 PNLIPP16233 465 aa7.39□□□□□ -1.23
NEDD4-211ENST00000514893 GBP1P32455 592 aa7.39□□□□□ -1.23
NEDD4-211ENST00000514893 KCNA1Q09470 495 aa7.39□□□□□ -1.23
NEDD4-211ENST00000514893 NMIQ13287 307 aaPredicted RBP7.39□□□□□ -1.23
NEDD4-211ENST00000514893 MEI1Q5TIA1 1274 aa7.39□□□□□ -1.23
NEDD4-211ENST00000514893 WAPLQ7Z5K2 1190 aa7.39□□□□□ -1.23
NEDD4-211ENST00000514893 DAGLBQ8NCG7 672 aa7.39□□□□□ -1.23
NEDD4-211ENST00000514893 GATAD2BQ8WXI9 593 aa7.39□□□□□ -1.23
NEDD4-211ENST00000514893 REV1Q9UBZ9 1251 aa7.39□□□□□ -1.23
NEDD4-211ENST00000514893 FAM221AA4D161 298 aa7.38□□□□□ -1.23
NEDD4-211ENST00000514893 PCBP3P57721 371 aaKnown RBP7.38□□□□□ -1.23
NEDD4-211ENST00000514893 YBX1P67809 324 aaKnown RBP7.38□□□□□ -1.23
NEDD4-211ENST00000514893 LMNB2Q03252 620 aa7.38□□□□□ -1.23
NEDD4-211ENST00000514893 CAMK2GQ13555 558 aaPredicted RBP7.38□□□□□ -1.23
NEDD4-211ENST00000514893 BNC2Q6ZN30 1099 aaPredicted RBP7.38□□□□□ -1.23
NEDD4-211ENST00000514893 CEP128Q6ZU80 1094 aa7.38□□□□□ -1.23
NEDD4-211ENST00000514893 ZNF655Q8N720 491 aaPredicted RBP7.38□□□□□ -1.23
NEDD4-211ENST00000514893 KLHL3Q9UH77 587 aa7.38□□□□□ -1.23
NEDD4-211ENST00000514893 CELA3BP08861 270 aa7.37□□□□□ -1.23
NEDD4-211ENST00000514893 VIPR1P32241 457 aa7.37□□□□□ -1.23
NEDD4-211ENST00000514893 RNF4P78317 190 aa7.37□□□□□ -1.23
NEDD4-211ENST00000514893 MLECQ14165 292 aa7.37□□□□□ -1.23
NEDD4-211ENST00000514893 EAPPQ56P03 285 aaPredicted RBP7.37□□□□□ -1.23
NEDD4-211ENST00000514893 PRRT2Q7Z6L0 340 aaPredicted RBP7.37□□□□□ -1.23
NEDD4-211ENST00000514893 VWCEQ96DN2 955 aa7.37□□□□□ -1.23
NEDD4-211ENST00000514893 BORCS6Q96GS4 357 aa7.37□□□□□ -1.23
NEDD4-211ENST00000514893 MAP6Q96JE9 813 aa7.37□□□□□ -1.23
NEDD4-211ENST00000514893 CNTD2Q9H8S5 307 aa7.37□□□□□ -1.23
NEDD4-211ENST00000514893 OTOL1A6NHN0 477 aaPredicted RBP7.36□□□□□ -1.23
NEDD4-211ENST00000514893 USP2O75604 605 aaPredicted RBP7.36□□□□□ -1.23
NEDD4-211ENST00000514893 HTR3BO95264 441 aa7.36□□□□□ -1.23
NEDD4-211ENST00000514893 RELL1Q8IUW5 271 aa7.36□□□□□ -1.23
NEDD4-211ENST00000514893 SP8Q8IXZ3 490 aa7.36□□□□□ -1.23
NEDD4-211ENST00000514893 LINC00116Q8NCU8 138 aa7.36□□□□□ -1.23
NEDD4-211ENST00000514893 KIF2CQ99661 725 aa7.36□□□□□ -1.23
NEDD4-211ENST00000514893 F13A1P00488 732 aa7.35□□□□□ -1.23
NEDD4-211ENST00000514893 MPOP05164 745 aa7.35□□□□□ -1.23
NEDD4-211ENST00000514893 ARL4AP40617 200 aa7.35□□□□□ -1.23
NEDD4-211ENST00000514893 TMEM62Q0P6H9 643 aa7.35□□□□□ -1.23
NEDD4-211ENST00000514893 CNKSR3Q6P9H4 555 aa7.35□□□□□ -1.23
NEDD4-211ENST00000514893 MZB1Q8WU39 189 aa7.35□□□□□ -1.23
NEDD4-211ENST00000514893 TCTN2Q96GX1 697 aa7.35□□□□□ -1.23
NEDD4-211ENST00000514893 HDAC8Q9BY41 377 aa7.35□□□□□ -1.23
NEDD4-211ENST00000514893 FOXP3Q9BZS1 431 aa7.35□□□□□ -1.23
NEDD4-211ENST00000514893 TCFL5Q9UL49 500 aa7.35□□□□□ -1.23
NEDD4-211ENST00000514893 USP31Q70CQ4 1352 aa7.34□□□□□ -1.23
NEDD4-211ENST00000514893 SLC22A31A6NKX4 558 aa7.34□□□□□ -1.23
NEDD4-211ENST00000514893 RGS13O14921 159 aa7.34□□□□□ -1.23
NEDD4-211ENST00000514893 PF4P02776 101 aa7.34□□□□□ -1.23
NEDD4-211ENST00000514893 EPHB3P54753 998 aa7.34□□□□□ -1.23
NEDD4-211ENST00000514893 RTP1P59025 263 aa7.34□□□□□ -1.23
NEDD4-211ENST00000514893 PSMD2Q13200 908 aa7.34□□□□□ -1.23
NEDD4-211ENST00000514893 SKOR2Q2VWA4 1001 aaPredicted RBP7.34□□□□□ -1.23
NEDD4-211ENST00000514893 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.34□□□□□ -1.23
NEDD4-211ENST00000514893 TNFRSF10DQ9UBN6 386 aa7.34□□□□□ -1.23
NEDD4-211ENST00000514893 IRS4O14654 1257 aaPredicted RBP7.33□□□□□ -1.24
NEDD4-211ENST00000514893 ERVFRD-1P60508 538 aa7.33□□□□□ -1.24
NEDD4-211ENST00000514893 LAPTM5Q13571 262 aa7.33□□□□□ -1.24
NEDD4-211ENST00000514893 PWP1Q13610 501 aa7.33□□□□□ -1.24
NEDD4-211ENST00000514893 GALNT18Q6P9A2 607 aa7.33□□□□□ -1.24
NEDD4-211ENST00000514893 ERICH6Q7L0X2 663 aa7.33□□□□□ -1.24
NEDD4-211ENST00000514893 FEZF2Q8TBJ5 459 aa7.33□□□□□ -1.24
NEDD4-211ENST00000514893 HHIPL1Q96JK4 782 aa7.33□□□□□ -1.24
NEDD4-211ENST00000514893 RNF19AQ9NV58 838 aa7.33□□□□□ -1.24
NEDD4-211ENST00000514893 PARP2Q9UGN5 583 aa7.33□□□□□ -1.24
NEDD4-211ENST00000514893 WTIPA6NIX2 430 aaPredicted RBP7.32□□□□□ -1.24
NEDD4-211ENST00000514893 SUPT5HO00267 1087 aaKnown RBP7.32□□□□□ -1.24
NEDD4-211ENST00000514893 GRIN3BO60391 1043 aa7.32□□□□□ -1.24
NEDD4-211ENST00000514893 ZDHHC14Q8IZN3 488 aa7.32□□□□□ -1.24
NEDD4-211ENST00000514893 TMEM74Q96NL1 305 aa7.32□□□□□ -1.24
NEDD4-211ENST00000514893 EPB41L4AQ9HCS5 686 aaPredicted RBP7.32□□□□□ -1.24
NEDD4-211ENST00000514893 LUC7LQ9NQ29 371 aaKnown RBP7.32□□□□□ -1.24
NEDD4-211ENST00000514893 POLR3KQ9Y2Y1 108 aaPredicted RBP7.32□□□□□ -1.24
NEDD4-211ENST00000514893 TMEM82A0PJX8 343 aa7.31□□□□□ -1.24
NEDD4-211ENST00000514893 EFEMP2O95967 443 aa7.31□□□□□ -1.24
NEDD4-211ENST00000514893 SYPP08247 313 aa7.31□□□□□ -1.24
NEDD4-211ENST00000514893 ADRB1P08588 477 aa7.31□□□□□ -1.24
NEDD4-211ENST00000514893 ENDOUP21128 410 aaKnown RBP7.31□□□□□ -1.24
NEDD4-211ENST00000514893 SDHBP21912 280 aa7.31□□□□□ -1.24
NEDD4-211ENST00000514893 GBP2P32456 591 aaPredicted RBP7.31□□□□□ -1.24
NEDD4-211ENST00000514893 DAB2P98082 770 aa7.31□□□□□ -1.24
NEDD4-211ENST00000514893 RAD51AP2Q09MP3 1159 aa7.31□□□□□ -1.24
NEDD4-211ENST00000514893 VMACQ2NL98 169 aa7.31□□□□□ -1.24
NEDD4-211ENST00000514893 NBPF9Q3BBW0 867 aa7.31□□□□□ -1.24
NEDD4-211ENST00000514893 LDHDQ86WU2 507 aa7.31□□□□□ -1.24
NEDD4-211ENST00000514893 FAM129CQ86XR2 697 aa7.31□□□□□ -1.24
NEDD4-211ENST00000514893 TEPSINQ96N21 525 aa7.31□□□□□ -1.24
NEDD4-211ENST00000514893 RSRP1Q9BUV0 290 aa7.31□□□□□ -1.24
NEDD4-211ENST00000514893 ZC3H12DA2A288 527 aaKnown RBP7.3□□□□□ -1.24
NEDD4-211ENST00000514893 PATL2C9JE40 543 aaKnown RBP7.3□□□□□ -1.24
NEDD4-211ENST00000514893 RAG1P15918 1043 aa7.3□□□□□ -1.24
NEDD4-211ENST00000514893 CDR1P51861 262 aa7.3□□□□□ -1.24
NEDD4-211ENST00000514893 XPCQ01831 940 aaPredicted RBP7.3□□□□□ -1.24
NEDD4-211ENST00000514893 MPP2Q14168 576 aa7.3□□□□□ -1.24
NEDD4-211ENST00000514893 TMEFF1Q8IYR6 380 aa7.3□□□□□ -1.24
NEDD4-211ENST00000514893 LINC01356Q8N9X3 169 aa7.3□□□□□ -1.24
NEDD4-211ENST00000514893 PWWP2AQ96N64 755 aa7.3□□□□□ -1.24
NEDD4-211ENST00000514893 KLHL14Q9P2G3 628 aa7.3□□□□□ -1.24
NEDD4-211ENST00000514893 TAF6LQ9Y6J9 622 aa7.3□□□□□ -1.24
NEDD4-211ENST00000514893 ANKRD33BA6NCL7 494 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms