RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 E7EWF7 191 aa8.36□□□□□ -1.07
SMAD1-213ENST00000514778 SMIM22K7EJ46 135 aa8.36□□□□□ -1.07
SMAD1-213ENST00000514778 SLC27A2O14975 620 aa8.36□□□□□ -1.07
SMAD1-213ENST00000514778 RANBP6O60518 1105 aaKnown RBP8.36□□□□□ -1.07
SMAD1-213ENST00000514778 PRDM1O75626 825 aa8.36□□□□□ -1.07
SMAD1-213ENST00000514778 MCCP23508 829 aa8.36□□□□□ -1.07
SMAD1-213ENST00000514778 HSPA4P34932 840 aa8.36□□□□□ -1.07
SMAD1-213ENST00000514778 ANAPC15P60006 121 aa8.36□□□□□ -1.07
SMAD1-213ENST00000514778 HAND2P61296 217 aa8.36□□□□□ -1.07
SMAD1-213ENST00000514778 JAG1P78504 1218 aa8.36□□□□□ -1.07
SMAD1-213ENST00000514778 SEPT2Q15019 361 aa8.36□□□□□ -1.07
SMAD1-213ENST00000514778 CCL15Q16663 113 aa8.36□□□□□ -1.07
SMAD1-213ENST00000514778 CREB3L3Q68CJ9 461 aa8.36□□□□□ -1.07
SMAD1-213ENST00000514778 SIAH1Q8IUQ4 282 aa8.36□□□□□ -1.07
SMAD1-213ENST00000514778 TBC1D10CQ8IV04 446 aa8.36□□□□□ -1.07
SMAD1-213ENST00000514778 NCOA7Q8NI08 942 aa8.36□□□□□ -1.07
SMAD1-213ENST00000514778 ANKS1AQ92625 1134 aa8.36□□□□□ -1.07
SMAD1-213ENST00000514778 BEGAINQ9BUH8 593 aa8.36□□□□□ -1.07
SMAD1-213ENST00000514778 USP26Q9BXU7 913 aa8.36□□□□□ -1.07
SMAD1-213ENST00000514778 ADAM33Q9BZ11 813 aa8.36□□□□□ -1.07
SMAD1-213ENST00000514778 TMOD4Q9NZQ9 345 aa8.36□□□□□ -1.07
SMAD1-213ENST00000514778 PNMA3Q9UL41 463 aa8.36□□□□□ -1.07
SMAD1-213ENST00000514778 AGTPBP1Q9UPW5 1226 aa8.36□□□□□ -1.07
SMAD1-213ENST00000514778 BAZ2AQ9UIF9 1905 aaKnown RBP8.35□□□□□ -1.07
SMAD1-213ENST00000514778 TRIM75PA6NK02 468 aa8.35□□□□□ -1.07
SMAD1-213ENST00000514778 EEF2P13639 858 aaKnown RBP8.35□□□□□ -1.07
SMAD1-213ENST00000514778 HOXA7P31268 230 aaPredicted RBP8.35□□□□□ -1.07
SMAD1-213ENST00000514778 MTMR2Q13614 643 aa8.35□□□□□ -1.07
SMAD1-213ENST00000514778 MOGSQ13724 837 aa8.35□□□□□ -1.07
SMAD1-213ENST00000514778 SART3Q15020 963 aaKnown RBP8.35□□□□□ -1.07
SMAD1-213ENST00000514778 RCSD1Q6JBY9 416 aa8.35□□□□□ -1.07
SMAD1-213ENST00000514778 RALYLQ86SE5 291 aaKnown RBP8.35□□□□□ -1.07
SMAD1-213ENST00000514778 TMTC2Q8N394 836 aa8.35□□□□□ -1.07
SMAD1-213ENST00000514778 FBXL16Q8N461 479 aa8.35□□□□□ -1.07
SMAD1-213ENST00000514778 GMCL1P1Q8NEA9 526 aa8.35□□□□□ -1.07
SMAD1-213ENST00000514778 GTF3C2Q8WUA4 911 aaPredicted RBP8.35□□□□□ -1.07
SMAD1-213ENST00000514778 BRI3BPQ8WY22 251 aa8.35□□□□□ -1.07
SMAD1-213ENST00000514778 IL17RAQ96F46 866 aa8.35□□□□□ -1.07
SMAD1-213ENST00000514778 CEP95Q96GE4 821 aa8.35□□□□□ -1.07
SMAD1-213ENST00000514778 ZBED2Q9BTP6 218 aa8.35□□□□□ -1.07
SMAD1-213ENST00000514778 VCPKMTQ9H867 229 aa8.35□□□□□ -1.07
SMAD1-213ENST00000514778 GOPCQ9HD26 462 aa8.35□□□□□ -1.07
SMAD1-213ENST00000514778 RTN4Q9NQC3 1192 aaKnown RBP8.35□□□□□ -1.07
SMAD1-213ENST00000514778 WBP1LQ9NX94 342 aa8.35□□□□□ -1.07
SMAD1-213ENST00000514778 PCDHGA10Q9Y5H3 936 aa8.35□□□□□ -1.07
SMAD1-213ENST00000514778 LAMA4Q16363 1823 aa8.35□□□□□ -1.07
SMAD1-213ENST00000514778 A0A1W2PRG0 241 aa8.34□□□□□ -1.07
SMAD1-213ENST00000514778 WDR46O15213 610 aaKnown RBP8.34□□□□□ -1.07
SMAD1-213ENST00000514778 AOC2O75106 756 aa8.34□□□□□ -1.07
SMAD1-213ENST00000514778 KDM4AO75164 1064 aa8.34□□□□□ -1.07
SMAD1-213ENST00000514778 TOP1P11387 765 aaKnown RBP8.34□□□□□ -1.07
SMAD1-213ENST00000514778 PSMA5P28066 241 aa8.34□□□□□ -1.07
SMAD1-213ENST00000514778 MCM5P33992 734 aa8.34□□□□□ -1.07
SMAD1-213ENST00000514778 GRM1Q13255 1194 aa8.34□□□□□ -1.07
SMAD1-213ENST00000514778 FAM47AQ5JRC9 791 aa8.34□□□□□ -1.07
SMAD1-213ENST00000514778 RRP12Q5JTH9 1297 aaKnown RBP8.34□□□□□ -1.07
SMAD1-213ENST00000514778 GMCL1Q96IK5 515 aa8.34□□□□□ -1.07
SMAD1-213ENST00000514778 TMEM87BQ96K49 555 aa8.34□□□□□ -1.07
SMAD1-213ENST00000514778 ZSCAN10Q96SZ4 725 aaPredicted RBP8.34□□□□□ -1.07
SMAD1-213ENST00000514778 FEZ1Q99689 392 aa8.34□□□□□ -1.07
SMAD1-213ENST00000514778 PTPN18Q99952 460 aa8.34□□□□□ -1.07
SMAD1-213ENST00000514778 UBAC1Q9BSL1 405 aa8.34□□□□□ -1.07
SMAD1-213ENST00000514778 TM6SF1Q9BZW5 370 aa8.34□□□□□ -1.07
SMAD1-213ENST00000514778 IL17RBQ9NRM6 502 aa8.34□□□□□ -1.07
SMAD1-213ENST00000514778 TOMM22Q9NS69 142 aa8.34□□□□□ -1.07
SMAD1-213ENST00000514778 ZSWIM5Q9P217 1185 aa8.34□□□□□ -1.07
SMAD1-213ENST00000514778 TACC3Q9Y6A5 838 aa8.34□□□□□ -1.07
SMAD1-213ENST00000514778 GREB1LQ9C091 1923 aaPredicted RBP8.34□□□□□ -1.07
SMAD1-213ENST00000514778 NEDD4P46934 1319 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 MYPNQ86TC9 1320 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 ERICH2A1L162 156 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 B4E1Z4 1266 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 USP17L15C9J2P7 530 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 BTBD19C9JJ37 291 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 USP17L13C9JLJ4 530 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 BHMG1C9JSJ3 638 aaPredicted RBP8.33□□□□□ -1.08
SMAD1-213ENST00000514778 USP17L11C9JVI0 530 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 USP17L18D6R9N7 530 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 USP17L22D6RA61 530 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 USP17L17D6RBQ6 530 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 USP17L19D6RCP7 530 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 USP17L20D6RJB6 530 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 F5H6K3 240 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 PDHXO00330 501 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 IGF2BP3O00425 579 aaKnown RBP eCLIP8.33□□□□□ -1.08
SMAD1-213ENST00000514778 PLA2G6O60733 806 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 FDX1P10109 184 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 OSBPP22059 807 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 LIFRP42702 1097 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 GCLCP48506 637 aaPredicted RBP8.33□□□□□ -1.08
SMAD1-213ENST00000514778 HMGCS2P54868 508 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 KLRC3Q07444 240 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 USP17L24Q0WX57 530 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 SHROOM1Q2M3G4 852 aaPredicted RBP8.33□□□□□ -1.08
SMAD1-213ENST00000514778 C8orf34Q49A92 452 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 GPAT2Q6NUI2 795 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 TYW1BQ6NUM6 668 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 LBX2Q6XYB7 198 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 MB21D2Q8IYB1 491 aaPredicted RBP8.33□□□□□ -1.08
SMAD1-213ENST00000514778 STK11IPQ8N1F8 1099 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms