RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 MAP7Q14244 749 aa7.15□□□□□ -1.26
RFC1-216ENST00000514572 BRDTQ58F21 947 aaPredicted RBP7.15□□□□□ -1.26
RFC1-216ENST00000514572 ZNF385CQ66K41 422 aaPredicted RBP7.15□□□□□ -1.26
RFC1-216ENST00000514572 ANKRD34AQ69YU3 496 aa7.15□□□□□ -1.26
RFC1-216ENST00000514572 NSMFQ6X4W1 530 aa7.15□□□□□ -1.26
RFC1-216ENST00000514572 DYMQ7RTS9 669 aa7.15□□□□□ -1.26
RFC1-216ENST00000514572 FERMT3Q86UX7 667 aa7.15□□□□□ -1.26
RFC1-216ENST00000514572 TMEM130Q8N3G9 435 aa7.15□□□□□ -1.26
RFC1-216ENST00000514572 FBXL18Q96ME1 805 aa7.15□□□□□ -1.26
RFC1-216ENST00000514572 KREMEN1Q96MU8 473 aa7.15□□□□□ -1.26
RFC1-216ENST00000514572 PIDD1Q9HB75 910 aa7.15□□□□□ -1.26
RFC1-216ENST00000514572 GP6Q9HCN6 339 aa7.15□□□□□ -1.26
RFC1-216ENST00000514572 CEP131Q9UPN4 1083 aa7.15□□□□□ -1.26
RFC1-216ENST00000514572 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.14□□□□□ -1.27
RFC1-216ENST00000514572 PRODHO43272 600 aa7.14□□□□□ -1.27
RFC1-216ENST00000514572 PPM1BO75688 479 aa7.14□□□□□ -1.27
RFC1-216ENST00000514572 EYA4O95677 639 aa7.14□□□□□ -1.27
RFC1-216ENST00000514572 ELNP15502 786 aa7.14□□□□□ -1.27
RFC1-216ENST00000514572 CNGA1P29973 690 aa7.14□□□□□ -1.27
RFC1-216ENST00000514572 RNF4P78317 190 aa7.14□□□□□ -1.27
RFC1-216ENST00000514572 ODR4Q5SWX8 454 aa7.14□□□□□ -1.27
RFC1-216ENST00000514572 SLC7A14Q8TBB6 771 aa7.14□□□□□ -1.27
RFC1-216ENST00000514572 C1orf159Q96HA4 380 aa7.14□□□□□ -1.27
RFC1-216ENST00000514572 ASPNQ9BXN1 380 aa7.14□□□□□ -1.27
RFC1-216ENST00000514572 MKRN2Q9H000 416 aaKnown RBP7.14□□□□□ -1.27
RFC1-216ENST00000514572 PRR13Q9NZ81 148 aa7.14□□□□□ -1.27
RFC1-216ENST00000514572 LRP2BPQ9P2M1 347 aa7.14□□□□□ -1.27
RFC1-216ENST00000514572 CGGBP1Q9UFW8 167 aaPredicted RBP7.14□□□□□ -1.27
RFC1-216ENST00000514572 SFMBT1Q9UHJ3 866 aa7.14□□□□□ -1.27
RFC1-216ENST00000514572 PCOLCE2Q9UKZ9 415 aa7.14□□□□□ -1.27
RFC1-216ENST00000514572 ADAMTS8Q9UP79 889 aa7.14□□□□□ -1.27
RFC1-216ENST00000514572 F8W735 103 aaPredicted RBP7.13□□□□□ -1.27
RFC1-216ENST00000514572 DLX3O60479 287 aa7.13□□□□□ -1.27
RFC1-216ENST00000514572 SLITRK5O94991 958 aa7.13□□□□□ -1.27
RFC1-216ENST00000514572 EVA1CP58658 441 aa7.13□□□□□ -1.27
RFC1-216ENST00000514572 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.13□□□□□ -1.27
RFC1-216ENST00000514572 XAGE3Q8WTP9 111 aa7.13□□□□□ -1.27
RFC1-216ENST00000514572 RNF141Q8WVD5 230 aa7.13□□□□□ -1.27
RFC1-216ENST00000514572 DDX1Q92499 740 aaKnown RBP7.13□□□□□ -1.27
RFC1-216ENST00000514572 SLC52A2Q9HAB3 445 aa7.13□□□□□ -1.27
RFC1-216ENST00000514572 FAN1Q9Y2M0 1017 aa7.13□□□□□ -1.27
RFC1-216ENST00000514572 SUGT1Q9Y2Z0 365 aa7.13□□□□□ -1.27
RFC1-216ENST00000514572 FHOD1Q9Y613 1164 aa7.13□□□□□ -1.27
RFC1-216ENST00000514572 ALG1L2C9J202 215 aa7.12□□□□□ -1.27
RFC1-216ENST00000514572 RNGTTO60942 597 aaKnown RBP7.12□□□□□ -1.27
RFC1-216ENST00000514572 SCG5P05408 212 aa7.12□□□□□ -1.27
RFC1-216ENST00000514572 ITGA4P13612 1032 aa7.12□□□□□ -1.27
RFC1-216ENST00000514572 PREPP48147 710 aa7.12□□□□□ -1.27
RFC1-216ENST00000514572 GFRA1P56159 465 aa7.12□□□□□ -1.27
RFC1-216ENST00000514572 ZNF445P59923 1031 aa7.12□□□□□ -1.27
RFC1-216ENST00000514572 NFKB2Q00653 900 aa7.12□□□□□ -1.27
RFC1-216ENST00000514572 CYP4F3Q08477 520 aa7.12□□□□□ -1.27
RFC1-216ENST00000514572 KCNMA1Q12791 1236 aa7.12□□□□□ -1.27
RFC1-216ENST00000514572 MAP4K2Q12851 820 aa7.12□□□□□ -1.27
RFC1-216ENST00000514572 GRB10Q13322 594 aa7.12□□□□□ -1.27
RFC1-216ENST00000514572 NBPF9Q3BBW0 867 aa7.12□□□□□ -1.27
RFC1-216ENST00000514572 LETMD1Q6P1Q0 360 aa7.12□□□□□ -1.27
RFC1-216ENST00000514572 FDX2Q6P4F2 183 aa7.12□□□□□ -1.27
RFC1-216ENST00000514572 SVOPQ8N4V2 548 aa7.12□□□□□ -1.27
RFC1-216ENST00000514572 UBR7Q8N806 425 aa7.12□□□□□ -1.27
RFC1-216ENST00000514572 C12orf50Q8NA57 414 aaPredicted RBP7.12□□□□□ -1.27
RFC1-216ENST00000514572 SYTL5Q8TDW5 730 aaPredicted RBP7.12□□□□□ -1.27
RFC1-216ENST00000514572 BTN2A2Q8WVV5 523 aa7.12□□□□□ -1.27
RFC1-216ENST00000514572 JDP2Q8WYK2 163 aa7.12□□□□□ -1.27
RFC1-216ENST00000514572 IPO9Q96P70 1041 aaKnown RBP7.12□□□□□ -1.27
RFC1-216ENST00000514572 MCM8Q9UJA3 840 aa7.12□□□□□ -1.27
RFC1-216ENST00000514572 G3BP2Q9UN86 482 aaKnown RBP7.12□□□□□ -1.27
RFC1-216ENST00000514572 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.11□□□□□ -1.27
RFC1-216ENST00000514572 ARHGEF15O94989 841 aa7.11□□□□□ -1.27
RFC1-216ENST00000514572 GSK3AP49840 483 aa7.11□□□□□ -1.27
RFC1-216ENST00000514572 SNRPNP63162 240 aaKnown RBP7.11□□□□□ -1.27
RFC1-216ENST00000514572 GABREP78334 506 aa7.11□□□□□ -1.27
RFC1-216ENST00000514572 NTRK3Q16288 839 aa7.11□□□□□ -1.27
RFC1-216ENST00000514572 SLC35F1Q5T1Q4 408 aa7.11□□□□□ -1.27
RFC1-216ENST00000514572 GPAT2Q6NUI2 795 aa7.11□□□□□ -1.27
RFC1-216ENST00000514572 POMZP3Q6PJE2 187 aa7.11□□□□□ -1.27
RFC1-216ENST00000514572 SEZ6L2Q6UXD5 910 aa7.11□□□□□ -1.27
RFC1-216ENST00000514572 BRAPQ7Z569 592 aa7.11□□□□□ -1.27
RFC1-216ENST00000514572 ADAT2Q7Z6V5 191 aaKnown RBP7.11□□□□□ -1.27
RFC1-216ENST00000514572 AGGF1Q8N302 714 aaeCLIP7.11□□□□□ -1.27
RFC1-216ENST00000514572 PPM1KQ8N3J5 372 aa7.11□□□□□ -1.27
RFC1-216ENST00000514572 CRACR2BQ8N4Y2 399 aaPredicted RBP7.11□□□□□ -1.27
RFC1-216ENST00000514572 RIN3Q8TB24 985 aa7.11□□□□□ -1.27
RFC1-216ENST00000514572 EZH1Q92800 747 aaPredicted RBP7.11□□□□□ -1.27
RFC1-216ENST00000514572 SCLYQ96I15 445 aa7.11□□□□□ -1.27
RFC1-216ENST00000514572 PLVAPQ9BX97 442 aa7.11□□□□□ -1.27
RFC1-216ENST00000514572 SEMA6CQ9H3T2 930 aa7.11□□□□□ -1.27
RFC1-216ENST00000514572 AKT3Q9Y243 479 aa7.11□□□□□ -1.27
RFC1-216ENST00000514572 NOP56O00567 594 aaKnown RBP7.1□□□□□ -1.27
RFC1-216ENST00000514572 GNB5O14775 395 aa7.1□□□□□ -1.27
RFC1-216ENST00000514572 EFCAB14O75071 495 aa7.1□□□□□ -1.27
RFC1-216ENST00000514572 NPTXRO95502 500 aa7.1□□□□□ -1.27
RFC1-216ENST00000514572 SF1Q15637 639 aaKnown RBP7.1□□□□□ -1.27
RFC1-216ENST00000514572 GTF2IRD2BQ6EKJ0 949 aa7.1□□□□□ -1.27
RFC1-216ENST00000514572 FGD2Q7Z6J4 655 aa7.1□□□□□ -1.27
RFC1-216ENST00000514572 STRA8Q7Z7C7 330 aa7.1□□□□□ -1.27
RFC1-216ENST00000514572 GTF2IRD2Q86UP8 949 aa7.1□□□□□ -1.27
RFC1-216ENST00000514572 ADCY4Q8NFM4 1077 aa7.1□□□□□ -1.27
RFC1-216ENST00000514572 PPP1R14AQ96A00 147 aa7.1□□□□□ -1.27
RFC1-216ENST00000514572 MIPEPQ99797 713 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms