RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 RABGAP1Q9Y3P9 1069 aa16.43■□□□□ 0.22
USP46-209ENST00000514536 CNMDO75829 334 aa16.43■□□□□ 0.22
USP46-209ENST00000514536 TOP1P11387 765 aaKnown RBP16.43■□□□□ 0.22
USP46-209ENST00000514536 FCGRTP55899 365 aa16.43■□□□□ 0.22
USP46-209ENST00000514536 PKN2Q16513 984 aaKnown RBP16.43■□□□□ 0.22
USP46-209ENST00000514536 CREB3L3Q68CJ9 461 aa16.43■□□□□ 0.22
USP46-209ENST00000514536 LBX2Q6XYB7 198 aa16.43■□□□□ 0.22
USP46-209ENST00000514536 CYB5R4Q7L1T6 521 aa16.43■□□□□ 0.22
USP46-209ENST00000514536 ATG4CQ96DT6 458 aa16.43■□□□□ 0.22
USP46-209ENST00000514536 ZSCAN10Q96SZ4 725 aaPredicted RBP16.43■□□□□ 0.22
USP46-209ENST00000514536 BTBD7Q9P203 1132 aa16.43■□□□□ 0.22
USP46-209ENST00000514536 BMP3P12645 472 aa16.42■□□□□ 0.22
USP46-209ENST00000514536 SLC1A4P43007 532 aa16.42■□□□□ 0.22
USP46-209ENST00000514536 ERVK-9P63128 1117 aa16.42■□□□□ 0.22
USP46-209ENST00000514536 ERVK-24P63145 666 aa16.42■□□□□ 0.22
USP46-209ENST00000514536 CCDC178Q5BJE1 867 aa16.42■□□□□ 0.22
USP46-209ENST00000514536 DGKHQ86XP1 1220 aa16.42■□□□□ 0.22
USP46-209ENST00000514536 NCOA7Q8NI08 942 aa16.42■□□□□ 0.22
USP46-209ENST00000514536 ISY1Q9ULR0 285 aaKnown RBP16.42■□□□□ 0.22
USP46-209ENST00000514536 GNRH1P01148 92 aa16.41■□□□□ 0.22
USP46-209ENST00000514536 HOXD10P28358 340 aa16.41■□□□□ 0.22
USP46-209ENST00000514536 MLLT1Q03111 559 aaPredicted RBP16.41■□□□□ 0.22
USP46-209ENST00000514536 FBXO46Q6PJ61 603 aaPredicted RBP16.41■□□□□ 0.22
USP46-209ENST00000514536 RALYLQ86SE5 291 aaKnown RBP16.41■□□□□ 0.22
USP46-209ENST00000514536 GMCL1Q96IK5 515 aa16.41■□□□□ 0.22
USP46-209ENST00000514536 UBAC1Q9BSL1 405 aa16.41■□□□□ 0.22
USP46-209ENST00000514536 PPP1R9AQ9ULJ8 1098 aa16.41■□□□□ 0.22
USP46-209ENST00000514536 PTPN22Q9Y2R2 807 aa16.41■□□□□ 0.22
USP46-209ENST00000514536 TMEM232C9JQI7 657 aa16.4■□□□□ 0.22
USP46-209ENST00000514536 TNPO2O14787 897 aaKnown RBP16.4■□□□□ 0.22
USP46-209ENST00000514536 RASGRP2Q7LDG7 609 aa16.4■□□□□ 0.22
USP46-209ENST00000514536 ENAHQ8N8S7 591 aaPredicted RBP16.4■□□□□ 0.22
USP46-209ENST00000514536 ANKS1AQ92625 1134 aa16.4■□□□□ 0.22
USP46-209ENST00000514536 SLF1Q9BQI6 1058 aa16.4■□□□□ 0.22
USP46-209ENST00000514536 FEM1BQ9UK73 627 aa16.4■□□□□ 0.22
USP46-209ENST00000514536 ADAMTS5Q9UNA0 930 aa16.4■□□□□ 0.22
USP46-209ENST00000514536 TNKSO95271 1327 aa16.4■□□□□ 0.22
USP46-209ENST00000514536 MYPNQ86TC9 1320 aa16.4■□□□□ 0.22
USP46-209ENST00000514536 CCNA1P78396 465 aa16.39■□□□□ 0.21
USP46-209ENST00000514536 PLS1Q14651 629 aa16.39■□□□□ 0.21
USP46-209ENST00000514536 RNF20Q5VTR2 975 aa16.39■□□□□ 0.21
USP46-209ENST00000514536 KCTD1Q719H9 257 aa16.39■□□□□ 0.21
USP46-209ENST00000514536 CHST3Q7LGC8 479 aa16.39■□□□□ 0.21
USP46-209ENST00000514536 CCAR1Q8IX12 1150 aaKnown RBP16.39■□□□□ 0.21
USP46-209ENST00000514536 MB21D1Q8N884 522 aa16.39■□□□□ 0.21
USP46-209ENST00000514536 PRPF38AQ8NAV1 312 aaKnown RBP16.39■□□□□ 0.21
USP46-209ENST00000514536 COA7Q96BR5 231 aa16.39■□□□□ 0.21
USP46-209ENST00000514536 PORCNQ9H237 461 aa16.39■□□□□ 0.21
USP46-209ENST00000514536 SRRDQ9UH36 339 aa16.39■□□□□ 0.21
USP46-209ENST00000514536 VWA5AO00534 786 aa16.38■□□□□ 0.21
USP46-209ENST00000514536 REC8O95072 547 aa16.38■□□□□ 0.21
USP46-209ENST00000514536 CCDC96Q2M329 555 aa16.38■□□□□ 0.21
USP46-209ENST00000514536 DCAF4Q8WV16 495 aa16.38■□□□□ 0.21
USP46-209ENST00000514536 KIFC2Q96AC6 838 aa16.38■□□□□ 0.21
USP46-209ENST00000514536 KAT14Q9H8E8 782 aa16.38■□□□□ 0.21
USP46-209ENST00000514536 GABRQQ9UN88 632 aa16.38■□□□□ 0.21
USP46-209ENST00000514536 LAMA4Q16363 1823 aa16.38■□□□□ 0.21
USP46-209ENST00000514536 IFIT3O14879 490 aaKnown RBP16.38■□□□□ 0.21
USP46-209ENST00000514536 MAPK4P31152 587 aa16.38■□□□□ 0.21
USP46-209ENST00000514536 PRMT2P55345 433 aa16.38■□□□□ 0.21
USP46-209ENST00000514536 IKQ13123 557 aaPredicted RBP16.38■□□□□ 0.21
USP46-209ENST00000514536 TMEM132BQ14DG7 1078 aa16.38■□□□□ 0.21
USP46-209ENST00000514536 SEC23AQ15436 765 aa16.38■□□□□ 0.21
USP46-209ENST00000514536 MB21D2Q8IYB1 491 aaPredicted RBP16.38■□□□□ 0.21
USP46-209ENST00000514536 RASEFQ8IZ41 740 aa16.38■□□□□ 0.21
USP46-209ENST00000514536 CHURC1Q8WUH1 139 aa16.38■□□□□ 0.21
USP46-209ENST00000514536 MOV10L1Q9BXT6 1211 aaKnown RBP16.38■□□□□ 0.21
USP46-209ENST00000514536 SPATC1LQ9H0A9 340 aa16.38■□□□□ 0.21
USP46-209ENST00000514536 HPS5Q9UPZ3 1129 aa16.38■□□□□ 0.21
USP46-209ENST00000514536 PTCH2Q9Y6C5 1203 aa16.38■□□□□ 0.21
USP46-209ENST00000514536 FRMPD2Q68DX3 1309 aaPredicted RBP16.37■□□□□ 0.21
USP46-209ENST00000514536 MYH4Q9Y623 1939 aa16.37■□□□□ 0.21
USP46-209ENST00000514536 PDHBP11177 359 aa16.37■□□□□ 0.21
USP46-209ENST00000514536 STAT2P52630 851 aa16.37■□□□□ 0.21
USP46-209ENST00000514536 ANTXR2P58335 489 aa16.37■□□□□ 0.21
USP46-209ENST00000514536 PRKCZQ05513 592 aa16.37■□□□□ 0.21
USP46-209ENST00000514536 IFIT1BQ5T764 474 aaKnown RBP16.37■□□□□ 0.21
USP46-209ENST00000514536 WDR78Q5VTH9 848 aa16.37■□□□□ 0.21
USP46-209ENST00000514536 TTBK2Q6IQ55 1244 aa16.37■□□□□ 0.21
USP46-209ENST00000514536 FAM160B2Q86V87 743 aa16.37■□□□□ 0.21
USP46-209ENST00000514536 PNMA1Q8ND90 353 aa16.37■□□□□ 0.21
USP46-209ENST00000514536 CWC22Q9HCG8 908 aaKnown RBP16.37■□□□□ 0.21
USP46-209ENST00000514536 GPCPD1Q9NPB8 672 aa16.37■□□□□ 0.21
USP46-209ENST00000514536 ERICH2A1L162 156 aa16.36■□□□□ 0.21
USP46-209ENST00000514536 ZBED4O75132 1171 aa16.36■□□□□ 0.21
USP46-209ENST00000514536 ZKSCAN1P17029 563 aaPredicted RBP16.36■□□□□ 0.21
USP46-209ENST00000514536 FLT3LGP49771 235 aa16.36■□□□□ 0.21
USP46-209ENST00000514536 COL9A3Q14050 684 aaPredicted RBP16.36■□□□□ 0.21
USP46-209ENST00000514536 TSGA10IPQ3SY00 556 aa16.36■□□□□ 0.21
USP46-209ENST00000514536 RAET1EQ8TD07 263 aa16.36■□□□□ 0.21
USP46-209ENST00000514536 CTDP1Q9Y5B0 961 aaPredicted RBP16.36■□□□□ 0.21
USP46-209ENST00000514536 ZSWIM8A7E2V4 1837 aa16.36■□□□□ 0.21
USP46-209ENST00000514536 PRC1O43663 620 aa16.35■□□□□ 0.21
USP46-209ENST00000514536 PLA2G6O60733 806 aa16.35■□□□□ 0.21
USP46-209ENST00000514536 MCM5P33992 734 aa16.35■□□□□ 0.21
USP46-209ENST00000514536 HSPA4P34932 840 aa16.35■□□□□ 0.21
USP46-209ENST00000514536 SLC16A2P36021 539 aa16.35■□□□□ 0.21
USP46-209ENST00000514536 STAT3P40763 770 aa16.35■□□□□ 0.21
USP46-209ENST00000514536 WTAPQ15007 396 aa16.35■□□□□ 0.21
USP46-209ENST00000514536 SART3Q15020 963 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms