RNA–Protein interactions for RNA: ENST00000514534.1

DDR1-276, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-276ENST00000514534 GABPAQ06546 454 aa12.36□□□□□ -0.43
DDR1-276ENST00000514534 AKNAD1Q5T1N1 836 aa12.36□□□□□ -0.43
DDR1-276ENST00000514534 TMEM179Q6ZVK1 233 aa12.36□□□□□ -0.43
DDR1-276ENST00000514534 SSH3Q8TE77 659 aa12.36□□□□□ -0.43
DDR1-276ENST00000514534 ATG4CQ96DT6 458 aa12.36□□□□□ -0.43
DDR1-276ENST00000514534 MMP19Q99542 508 aa12.36□□□□□ -0.43
DDR1-276ENST00000514534 TINF2Q9BSI4 451 aa12.36□□□□□ -0.43
DDR1-276ENST00000514534 DBNLQ9UJU6 430 aaKnown RBP12.36□□□□□ -0.43
DDR1-276ENST00000514534 MROH7Q68CQ1 1323 aa12.36□□□□□ -0.43
DDR1-276ENST00000514534 MOXD2PA6NHM9 499 aa12.35□□□□□ -0.43
DDR1-276ENST00000514534 WDR46O15213 610 aaKnown RBP12.35□□□□□ -0.43
DDR1-276ENST00000514534 TIMP1P01033 207 aa12.35□□□□□ -0.43
DDR1-276ENST00000514534 TRIM27P14373 513 aa12.35□□□□□ -0.43
DDR1-276ENST00000514534 COPB2P35606 906 aa12.35□□□□□ -0.43
DDR1-276ENST00000514534 FAAP100Q0VG06 881 aa12.35□□□□□ -0.43
DDR1-276ENST00000514534 PPIGQ13427 754 aaKnown RBP eCLIP12.35□□□□□ -0.43
DDR1-276ENST00000514534 KCTD2Q14681 263 aa12.35□□□□□ -0.43
DDR1-276ENST00000514534 CCDC129Q6ZRS4 1044 aa12.35□□□□□ -0.43
DDR1-276ENST00000514534 IL27Q8NEV9 243 aa12.35□□□□□ -0.43
DDR1-276ENST00000514534 RIOK1Q9BRS2 568 aaKnown RBP12.35□□□□□ -0.43
DDR1-276ENST00000514534 CRNKL1Q9BZJ0 848 aaKnown RBP12.35□□□□□ -0.43
DDR1-276ENST00000514534 CCDC8Q9H0W5 538 aaPredicted RBP12.35□□□□□ -0.43
DDR1-276ENST00000514534 VCPKMTQ9H867 229 aa12.35□□□□□ -0.43
DDR1-276ENST00000514534 MCM9Q9NXL9 1143 aa12.35□□□□□ -0.43
DDR1-276ENST00000514534 SWAP70Q9UH65 585 aa12.35□□□□□ -0.43
DDR1-276ENST00000514534 CNPY2Q9Y2B0 182 aa12.35□□□□□ -0.43
DDR1-276ENST00000514534 CDH23Q9H251 3354 aa12.34□□□□□ -0.43
DDR1-276ENST00000514534 MAGEB6P1A0A0J9YX57 407 aa12.34□□□□□ -0.43
DDR1-276ENST00000514534 ADAMTS4O75173 837 aa12.34□□□□□ -0.43
DDR1-276ENST00000514534 ATP8B2P98198 1209 aa12.34□□□□□ -0.43
DDR1-276ENST00000514534 MFSD5Q6N075 450 aa12.34□□□□□ -0.43
DDR1-276ENST00000514534 RIOX2Q8IUF8 465 aa12.34□□□□□ -0.43
DDR1-276ENST00000514534 MSL3Q8N5Y2 521 aaKnown RBP12.34□□□□□ -0.43
DDR1-276ENST00000514534 PPM1EQ8WY54 764 aa12.34□□□□□ -0.43
DDR1-276ENST00000514534 ASB2Q96Q27 587 aa12.34□□□□□ -0.43
DDR1-276ENST00000514534 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.34□□□□□ -0.43
DDR1-276ENST00000514534 TMX2Q9Y320 296 aa12.34□□□□□ -0.43
DDR1-276ENST00000514534 PRUNE2Q8WUY3 3088 aa12.34□□□□□ -0.43
DDR1-276ENST00000514534 ZNF316A6NFI3 1004 aaPredicted RBP12.33□□□□□ -0.44
DDR1-276ENST00000514534 ZNF865P0CJ78 1059 aaPredicted RBP12.33□□□□□ -0.44
DDR1-276ENST00000514534 PLA2G5P39877 138 aa12.33□□□□□ -0.44
DDR1-276ENST00000514534 ACLYP53396 1101 aa12.33□□□□□ -0.44
DDR1-276ENST00000514534 MRPS5P82675 430 aaKnown RBP12.33□□□□□ -0.44
DDR1-276ENST00000514534 ICA1Q05084 483 aa12.33□□□□□ -0.44
DDR1-276ENST00000514534 TMEM132BQ14DG7 1078 aa12.33□□□□□ -0.44
DDR1-276ENST00000514534 TTF1Q15361 905 aaPredicted RBP12.33□□□□□ -0.44
DDR1-276ENST00000514534 ZNF792Q3KQV3 632 aa12.33□□□□□ -0.44
DDR1-276ENST00000514534 PSRC1Q6PGN9 363 aaPredicted RBP12.33□□□□□ -0.44
DDR1-276ENST00000514534 SAMD1Q6SPF0 538 aaPredicted RBP12.33□□□□□ -0.44
DDR1-276ENST00000514534 SPICE1Q8N0Z3 855 aa12.33□□□□□ -0.44
DDR1-276ENST00000514534 TMEM199Q8N511 208 aa12.33□□□□□ -0.44
DDR1-276ENST00000514534 GLT1D1Q96MS3 346 aa12.33□□□□□ -0.44
DDR1-276ENST00000514534 PBX4Q9BYU1 374 aa12.33□□□□□ -0.44
DDR1-276ENST00000514534 TSPYL2Q9H2G4 693 aaPredicted RBP12.33□□□□□ -0.44
DDR1-276ENST00000514534 ANTXR1Q9H6X2 564 aa12.33□□□□□ -0.44
DDR1-276ENST00000514534 MSRAQ9UJ68 235 aa12.33□□□□□ -0.44
DDR1-276ENST00000514534 NOP58Q9Y2X3 529 aaKnown RBP12.33□□□□□ -0.44
DDR1-276ENST00000514534 PGK2P07205 417 aa12.32□□□□□ -0.44
DDR1-276ENST00000514534 STAT3P40763 770 aa12.32□□□□□ -0.44
DDR1-276ENST00000514534 RAB30Q15771 203 aa12.32□□□□□ -0.44
DDR1-276ENST00000514534 KIAA1755Q5JYT7 1200 aa12.32□□□□□ -0.44
DDR1-276ENST00000514534 PCSK9Q8NBP7 692 aaKnown RBP12.32□□□□□ -0.44
DDR1-276ENST00000514534 KLHDC9Q8NEP7 349 aa12.32□□□□□ -0.44
DDR1-276ENST00000514534 ADAMTS19Q8TE59 1207 aa12.32□□□□□ -0.44
DDR1-276ENST00000514534 FRAT1Q92837 279 aaPredicted RBP12.32□□□□□ -0.44
DDR1-276ENST00000514534 CLUAP1Q96AJ1 413 aa12.32□□□□□ -0.44
DDR1-276ENST00000514534 EAF2Q96CJ1 260 aaPredicted RBP12.32□□□□□ -0.44
DDR1-276ENST00000514534 FAM122AQ96E09 287 aa12.32□□□□□ -0.44
DDR1-276ENST00000514534 CCDC17Q96LX7 622 aa12.32□□□□□ -0.44
DDR1-276ENST00000514534 UHRF1Q96T88 793 aaPredicted RBP12.32□□□□□ -0.44
DDR1-276ENST00000514534 MTIF3Q9H2K0 278 aaKnown RBP12.32□□□□□ -0.44
DDR1-276ENST00000514534 PRDM12Q9H4Q4 367 aa12.32□□□□□ -0.44
DDR1-276ENST00000514534 SPC25Q9HBM1 224 aa12.32□□□□□ -0.44
DDR1-276ENST00000514534 TLR7Q9NYK1 1049 aaKnown RBP12.32□□□□□ -0.44
DDR1-276ENST00000514534 TBX21Q9UL17 535 aa12.32□□□□□ -0.44
DDR1-276ENST00000514534 FAM184BQ9ULE4 1060 aa12.32□□□□□ -0.44
DDR1-276ENST00000514534 ADAMTS5Q9UNA0 930 aa12.32□□□□□ -0.44
DDR1-276ENST00000514534 ELP1O95163 1332 aa12.32□□□□□ -0.44
DDR1-276ENST00000514534 SYNRGQ9UMZ2 1314 aa12.32□□□□□ -0.44
DDR1-276ENST00000514534 NCOR1O75376 2440 aa12.31□□□□□ -0.44
DDR1-276ENST00000514534 TLR3O15455 904 aaKnown RBP12.31□□□□□ -0.44
DDR1-276ENST00000514534 BCAR3O75815 825 aa12.31□□□□□ -0.44
DDR1-276ENST00000514534 TAL1P17542 331 aaPredicted RBP12.31□□□□□ -0.44
DDR1-276ENST00000514534 KCNA10Q16322 511 aa12.31□□□□□ -0.44
DDR1-276ENST00000514534 TMEM240Q5SV17 173 aa12.31□□□□□ -0.44
DDR1-276ENST00000514534 RASIP1Q5U651 963 aa12.31□□□□□ -0.44
DDR1-276ENST00000514534 AMOTL1Q8IY63 956 aa12.31□□□□□ -0.44
DDR1-276ENST00000514534 DCP1AQ9NPI6 582 aaPredicted RBP12.31□□□□□ -0.44
DDR1-276ENST00000514534 GBF1Q92538 1859 aa12.31□□□□□ -0.44
DDR1-276ENST00000514534 SYNGAP1Q96PV0 1343 aa12.31□□□□□ -0.44
DDR1-276ENST00000514534 APBB1O00213 710 aa12.3□□□□□ -0.44
DDR1-276ENST00000514534 DUSP11O75319 330 aaKnown RBP12.3□□□□□ -0.44
DDR1-276ENST00000514534 IGFBP4P22692 258 aa12.3□□□□□ -0.44
DDR1-276ENST00000514534 CST5P28325 142 aaPredicted RBP12.3□□□□□ -0.44
DDR1-276ENST00000514534 PBX2P40425 430 aa12.3□□□□□ -0.44
DDR1-276ENST00000514534 SLC9C2Q5TAH2 1124 aa12.3□□□□□ -0.44
DDR1-276ENST00000514534 ERC1Q8IUD2 1116 aa12.3□□□□□ -0.44
DDR1-276ENST00000514534 TMEM57Q8N5G2 664 aa12.3□□□□□ -0.44
DDR1-276ENST00000514534 SDR42E1Q8WUS8 393 aa12.3□□□□□ -0.44
DDR1-276ENST00000514534 VTI1AQ96AJ9 217 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms