RNA–Protein interactions for RNA: ENST00000514362.5

SEC31A-239, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 3

Gene SEC31A, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-239ENST00000514362 FERD3LQ96RJ6 166 aa6.86□□□□□ -1.31
SEC31A-239ENST00000514362 NSUN3Q9H649 340 aaKnown RBP6.86□□□□□ -1.31
SEC31A-239ENST00000514362 ANTXR1Q9H6X2 564 aa6.86□□□□□ -1.31
SEC31A-239ENST00000514362 MEIS3P2A8K0S8 358 aa6.85□□□□□ -1.31
SEC31A-239ENST00000514362 SCAMP3O14828 347 aaKnown RBP6.85□□□□□ -1.31
SEC31A-239ENST00000514362 RPL10P27635 214 aaKnown RBP6.85□□□□□ -1.31
SEC31A-239ENST00000514362 TRHRP34981 398 aaPredicted RBP6.85□□□□□ -1.31
SEC31A-239ENST00000514362 PCBP3P57721 371 aaKnown RBP6.85□□□□□ -1.31
SEC31A-239ENST00000514362 TEKQ02763 1124 aa6.85□□□□□ -1.31
SEC31A-239ENST00000514362 CHRNEQ04844 493 aa6.85□□□□□ -1.31
SEC31A-239ENST00000514362 FBXW10Q5XX13 1052 aa6.85□□□□□ -1.31
SEC31A-239ENST00000514362 ANKS4BQ8N8V4 417 aa6.85□□□□□ -1.31
SEC31A-239ENST00000514362 FBXO15Q8NCQ5 510 aaPredicted RBP6.85□□□□□ -1.31
SEC31A-239ENST00000514362 BHLHE22Q8NFJ8 381 aaPredicted RBP6.85□□□□□ -1.31
SEC31A-239ENST00000514362 ZNF512BQ96KM6 892 aaPredicted RBP6.85□□□□□ -1.31
SEC31A-239ENST00000514362 MKRN2Q9H000 416 aaKnown RBP6.85□□□□□ -1.31
SEC31A-239ENST00000514362 C19orf44Q9H6X5 657 aa6.85□□□□□ -1.31
SEC31A-239ENST00000514362 DCP1AQ9NPI6 582 aaPredicted RBP6.85□□□□□ -1.31
SEC31A-239ENST00000514362 ZMYM5Q9UJ78 669 aa6.85□□□□□ -1.31
SEC31A-239ENST00000514362 PCDHGB7Q9Y5F8 929 aa6.85□□□□□ -1.31
SEC31A-239ENST00000514362 DBX1A6NMT0 343 aa6.84□□□□□ -1.31
SEC31A-239ENST00000514362 TNFRSF10CO14798 259 aa6.84□□□□□ -1.31
SEC31A-239ENST00000514362 RAP1GAPP47736 663 aa6.84□□□□□ -1.31
SEC31A-239ENST00000514362 INTS3Q68E01 1043 aaKnown RBP6.84□□□□□ -1.31
SEC31A-239ENST00000514362 SYDE1Q6ZW31 735 aaPredicted RBP6.84□□□□□ -1.31
SEC31A-239ENST00000514362 WAPLQ7Z5K2 1190 aa6.84□□□□□ -1.31
SEC31A-239ENST00000514362 TMC3Q7Z5M5 1100 aa6.84□□□□□ -1.31
SEC31A-239ENST00000514362 TCTN2Q96GX1 697 aa6.84□□□□□ -1.31
SEC31A-239ENST00000514362 SLC6A18Q96N87 628 aa6.84□□□□□ -1.31
SEC31A-239ENST00000514362 HDAC8Q9BY41 377 aa6.84□□□□□ -1.31
SEC31A-239ENST00000514362 KRTAP4-11Q9BYQ6 195 aa6.84□□□□□ -1.31
SEC31A-239ENST00000514362 EPB41L4BQ9H329 900 aa6.84□□□□□ -1.31
SEC31A-239ENST00000514362 FBXL21Q9UKT6 434 aa6.84□□□□□ -1.31
SEC31A-239ENST00000514362 TCFL5Q9UL49 500 aa6.84□□□□□ -1.31
SEC31A-239ENST00000514362 VAMP1P23763 118 aa6.83□□□□□ -1.32
SEC31A-239ENST00000514362 SNW1Q13573 536 aaKnown RBP6.83□□□□□ -1.32
SEC31A-239ENST00000514362 SNX17Q15036 470 aa6.83□□□□□ -1.32
SEC31A-239ENST00000514362 NR0B2Q15466 257 aa6.83□□□□□ -1.32
SEC31A-239ENST00000514362 TMEM192Q8IY95 271 aa6.83□□□□□ -1.32
SEC31A-239ENST00000514362 ZNF654Q8IZM8 581 aa6.83□□□□□ -1.32
SEC31A-239ENST00000514362 USHBP1Q8N6Y0 703 aa6.83□□□□□ -1.32
SEC31A-239ENST00000514362 SLC9A7Q96T83 725 aa6.83□□□□□ -1.32
SEC31A-239ENST00000514362 FOXP3Q9BZS1 431 aa6.83□□□□□ -1.32
SEC31A-239ENST00000514362 PRDM14Q9GZV8 571 aa6.83□□□□□ -1.32
SEC31A-239ENST00000514362 RNF32Q9H0A6 362 aa6.83□□□□□ -1.32
SEC31A-239ENST00000514362 CWC22Q9HCG8 908 aaKnown RBP6.83□□□□□ -1.32
SEC31A-239ENST00000514362 DDX41Q9UJV9 622 aaKnown RBP6.83□□□□□ -1.32
SEC31A-239ENST00000514362 ZNRF3Q9ULT6 936 aa6.83□□□□□ -1.32
SEC31A-239ENST00000514362 PCDHB12Q9Y5F1 795 aa6.83□□□□□ -1.32
SEC31A-239ENST00000514362 FAM86C2PA6NEL3 165 aa6.82□□□□□ -1.32
SEC31A-239ENST00000514362 SIGLEC6O43699 453 aa6.82□□□□□ -1.32
SEC31A-239ENST00000514362 PRAMEF1O95521 474 aa6.82□□□□□ -1.32
SEC31A-239ENST00000514362 SYPP08247 313 aa6.82□□□□□ -1.32
SEC31A-239ENST00000514362 TMEM253P0C7T8 217 aa6.82□□□□□ -1.32
SEC31A-239ENST00000514362 SLC14A2Q15849 920 aa6.82□□□□□ -1.32
SEC31A-239ENST00000514362 LINC00116Q8NCU8 138 aa6.82□□□□□ -1.32
SEC31A-239ENST00000514362 SLC6A17Q9H1V8 727 aa6.82□□□□□ -1.32
SEC31A-239ENST00000514362 CHST7Q9NS84 486 aa6.82□□□□□ -1.32
SEC31A-239ENST00000514362 GPR160Q9UJ42 338 aa6.82□□□□□ -1.32
SEC31A-239ENST00000514362 NFIBO00712 420 aa6.81□□□□□ -1.32
SEC31A-239ENST00000514362 ANKLE2Q86XL3 938 aa6.81□□□□□ -1.32
SEC31A-239ENST00000514362 CCDC144CPQ8IYA2 1237 aa6.81□□□□□ -1.32
SEC31A-239ENST00000514362 LINC01599Q8WXQ3 324 aa6.81□□□□□ -1.32
SEC31A-239ENST00000514362 SPATA32Q96LK8 384 aa6.81□□□□□ -1.32
SEC31A-239ENST00000514362 CRBNQ96SW2 442 aa6.81□□□□□ -1.32
SEC31A-239ENST00000514362 TM9SF2Q99805 663 aa6.81□□□□□ -1.32
SEC31A-239ENST00000514362 FKTNO75072 461 aa6.8□□□□□ -1.32
SEC31A-239ENST00000514362 RECKO95980 971 aa6.8□□□□□ -1.32
SEC31A-239ENST00000514362 ENDOUP21128 410 aaKnown RBP6.8□□□□□ -1.32
SEC31A-239ENST00000514362 RACK1P63244 317 aaKnown RBP6.8□□□□□ -1.32
SEC31A-239ENST00000514362 TRIM26Q12899 539 aaPredicted RBP6.8□□□□□ -1.32
SEC31A-239ENST00000514362 AUHQ13825 339 aaKnown RBP6.8□□□□□ -1.32
SEC31A-239ENST00000514362 COL9A2Q14055 689 aaPredicted RBP6.8□□□□□ -1.32
SEC31A-239ENST00000514362 SP110Q9HB58 689 aa6.8□□□□□ -1.32
SEC31A-239ENST00000514362 GFOD1Q9NXC2 390 aa6.8□□□□□ -1.32
SEC31A-239ENST00000514362 SUCOQ9UBS9 1254 aaKnown RBP6.8□□□□□ -1.32
SEC31A-239ENST00000514362 MEIS1O00470 390 aa6.79□□□□□ -1.32
SEC31A-239ENST00000514362 TSPAN15O95858 294 aa6.79□□□□□ -1.32
SEC31A-239ENST00000514362 PDE6BP35913 854 aa6.79□□□□□ -1.32
SEC31A-239ENST00000514362 KIR2DL1P43626 348 aaPredicted RBP6.79□□□□□ -1.32
SEC31A-239ENST00000514362 KIR2DL2P43627 348 aaPredicted RBP6.79□□□□□ -1.32
SEC31A-239ENST00000514362 IRF2BP1Q8IU81 584 aa6.79□□□□□ -1.32
SEC31A-239ENST00000514362 C7orf61Q8IZ16 206 aa6.79□□□□□ -1.32
SEC31A-239ENST00000514362 TAB3Q8N5C8 712 aaPredicted RBP6.79□□□□□ -1.32
SEC31A-239ENST00000514362 KCNN1Q92952 543 aa6.79□□□□□ -1.32
SEC31A-239ENST00000514362 MRRFQ96E11 262 aaKnown RBP6.79□□□□□ -1.32
SEC31A-239ENST00000514362 TOX2Q96NM4 488 aa6.79□□□□□ -1.32
SEC31A-239ENST00000514362 SLC26A8Q96RN1 970 aa6.79□□□□□ -1.32
SEC31A-239ENST00000514362 DSCC1Q9BVC3 393 aa6.79□□□□□ -1.32
SEC31A-239ENST00000514362 EBF1Q9UH73 591 aa6.79□□□□□ -1.32
SEC31A-239ENST00000514362 PPT2Q9UMR5 302 aa6.79□□□□□ -1.32
SEC31A-239ENST00000514362 YBX2Q9Y2T7 364 aaKnown RBP6.79□□□□□ -1.32
SEC31A-239ENST00000514362 ZNF281Q9Y2X9 895 aa6.79□□□□□ -1.32
SEC31A-239ENST00000514362 PSPNO60542 156 aa6.78□□□□□ -1.32
SEC31A-239ENST00000514362 ACRP10323 421 aa6.78□□□□□ -1.32
SEC31A-239ENST00000514362 PMS1P54277 932 aaKnown RBP6.78□□□□□ -1.32
SEC31A-239ENST00000514362 PAK2Q13177 524 aa6.78□□□□□ -1.32
SEC31A-239ENST00000514362 TIGD5Q53EQ6 642 aa6.78□□□□□ -1.32
SEC31A-239ENST00000514362 NOL9Q5SY16 702 aaKnown RBP6.78□□□□□ -1.32
SEC31A-239ENST00000514362 TMEM132EQ6IEE7 984 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms