RNA–Protein interactions for RNA: ENST00000513965.5

COPG1-208, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 2

Gene COPG1, Length 730 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-208ENST00000513965 DNAH12Q6ZR08 3092 aa13.7□□□□□ -0.22
COPG1-208ENST00000513965 TAL1P17542 331 aaPredicted RBP13.69□□□□□ -0.22
COPG1-208ENST00000513965 ADD2P35612 726 aa13.69□□□□□ -0.22
COPG1-208ENST00000513965 KCTD2Q14681 263 aa13.69□□□□□ -0.22
COPG1-208ENST00000513965 C12orf60Q5U649 245 aa13.69□□□□□ -0.22
COPG1-208ENST00000513965 AMOTL1Q8IY63 956 aa13.69□□□□□ -0.22
COPG1-208ENST00000513965 ABRAQ8N0Z2 381 aa13.69□□□□□ -0.22
COPG1-208ENST00000513965 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.69□□□□□ -0.22
COPG1-208ENST00000513965 XPNPEP3Q9NQH7 507 aa13.69□□□□□ -0.22
COPG1-208ENST00000513965 ATP8A2Q9NTI2 1148 aa13.69□□□□□ -0.22
COPG1-208ENST00000513965 COG6Q9Y2V7 657 aa13.69□□□□□ -0.22
COPG1-208ENST00000513965 SLC4A4Q9Y6R1 1079 aa13.69□□□□□ -0.22
COPG1-208ENST00000513965 WDR46O15213 610 aaKnown RBP13.68□□□□□ -0.22
COPG1-208ENST00000513965 HMMRO75330 724 aa13.68□□□□□ -0.22
COPG1-208ENST00000513965 SLC25A27O95847 323 aa13.68□□□□□ -0.22
COPG1-208ENST00000513965 RARBP10826 455 aa13.68□□□□□ -0.22
COPG1-208ENST00000513965 ITGB8P26012 769 aa13.68□□□□□ -0.22
COPG1-208ENST00000513965 STAT3P40763 770 aa13.68□□□□□ -0.22
COPG1-208ENST00000513965 FAM83BQ5T0W9 1011 aa13.68□□□□□ -0.22
COPG1-208ENST00000513965 SIRT2Q8IXJ6 389 aa13.68□□□□□ -0.22
COPG1-208ENST00000513965 RPAP2Q8IXW5 612 aaPredicted RBP13.68□□□□□ -0.22
COPG1-208ENST00000513965 MIER1Q8N108 512 aa13.68□□□□□ -0.22
COPG1-208ENST00000513965 LENG1Q96BZ8 264 aaPredicted RBP13.68□□□□□ -0.22
COPG1-208ENST00000513965 DDRGK1Q96HY6 314 aa13.68□□□□□ -0.22
COPG1-208ENST00000513965 CCDC17Q96LX7 622 aa13.68□□□□□ -0.22
COPG1-208ENST00000513965 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.68□□□□□ -0.222e-6■□□□□ 10
COPG1-208ENST00000513965 KANSL2Q9H9L4 492 aa13.68□□□□□ -0.22
COPG1-208ENST00000513965 PDLIM7Q9NR12 457 aa13.68□□□□□ -0.22
COPG1-208ENST00000513965 VWA5AO00534 786 aa13.67□□□□□ -0.22
COPG1-208ENST00000513965 PQBP1O60828 265 aaKnown RBP13.67□□□□□ -0.22
COPG1-208ENST00000513965 RAB11FIP3O75154 756 aa13.67□□□□□ -0.22
COPG1-208ENST00000513965 RNF180Q86T96 592 aa13.67□□□□□ -0.22
COPG1-208ENST00000513965 RIOX2Q8IUF8 465 aa13.67□□□□□ -0.22
COPG1-208ENST00000513965 MYLIPQ8WY64 445 aa13.67□□□□□ -0.22
COPG1-208ENST00000513965 NUP88Q99567 741 aaPredicted RBP13.67□□□□□ -0.22
COPG1-208ENST00000513965 TINF2Q9BSI4 451 aa13.67□□□□□ -0.22
COPG1-208ENST00000513965 GOPCQ9HD26 462 aa13.67□□□□□ -0.22
COPG1-208ENST00000513965 TACC3Q9Y6A5 838 aa13.67□□□□□ -0.22
COPG1-208ENST00000513965 RAG1P15918 1043 aa13.66□□□□□ -0.22
COPG1-208ENST00000513965 ATP5JP18859 108 aa13.66□□□□□ -0.22
COPG1-208ENST00000513965 EPHB4P54760 987 aa13.66□□□□□ -0.22
COPG1-208ENST00000513965 SNX17Q15036 470 aa13.66□□□□□ -0.22
COPG1-208ENST00000513965 ZNF792Q3KQV3 632 aa13.66□□□□□ -0.22
COPG1-208ENST00000513965 CTR9Q6PD62 1173 aa13.66□□□□□ -0.22
COPG1-208ENST00000513965 C16orf86Q6ZW13 317 aa13.66□□□□□ -0.22
COPG1-208ENST00000513965 MAFAQ8NHW3 353 aaPredicted RBP13.66□□□□□ -0.22
COPG1-208ENST00000513965 HAUS7Q99871 368 aa13.66□□□□□ -0.22
COPG1-208ENST00000513965 PUS7LQ9H0K6 701 aaKnown RBP13.66□□□□□ -0.22
COPG1-208ENST00000513965 TMEM39AQ9NV64 488 aa13.66□□□□□ -0.22
COPG1-208ENST00000513965 ADAMTS5Q9UNA0 930 aa13.66□□□□□ -0.22
COPG1-208ENST00000513965 PHF24Q9UPV7 400 aa13.66□□□□□ -0.22
COPG1-208ENST00000513965 FRMPD3Q5JV73 1810 aa13.66□□□□□ -0.22
COPG1-208ENST00000513965 MINDY4BA8MYZ0 360 aa13.65□□□□□ -0.22
COPG1-208ENST00000513965 SMARCA5O60264 1052 aaPredicted RBP13.65□□□□□ -0.22
COPG1-208ENST00000513965 CLTBP09497 229 aa13.65□□□□□ -0.22
COPG1-208ENST00000513965 MS4A1P11836 297 aa13.65□□□□□ -0.22
COPG1-208ENST00000513965 CPXCR1Q8N123 301 aa13.65□□□□□ -0.22
COPG1-208ENST00000513965 DDX11Q96FC9 970 aa13.65□□□□□ -0.22
COPG1-208ENST00000513965 RNPC3Q96LT9 517 aaKnown RBP13.65□□□□□ -0.22
COPG1-208ENST00000513965 TTYH1Q9H313 450 aaPredicted RBP13.65□□□□□ -0.22
COPG1-208ENST00000513965 ZBTB40Q9NUA8 1239 aa13.65□□□□□ -0.22
COPG1-208ENST00000513965 PPP1R9AQ9ULJ8 1098 aa13.65□□□□□ -0.22
COPG1-208ENST00000513965 CNPY2Q9Y2B0 182 aa13.65□□□□□ -0.22
COPG1-208ENST00000513965 UNC80Q8N2C7 3258 aa13.65□□□□□ -0.22
COPG1-208ENST00000513965 NAV1Q8NEY1 1877 aa13.65□□□□□ -0.22
COPG1-208ENST00000513965 LAMA2P24043 3122 aaKnown RBP13.64□□□□□ -0.23
COPG1-208ENST00000513965 A0A1W2PQ45 241 aaPredicted RBP13.64□□□□□ -0.23
COPG1-208ENST00000513965 A0A1W2PQY0 241 aa13.64□□□□□ -0.23
COPG1-208ENST00000513965 ZNF865P0CJ78 1059 aaPredicted RBP13.64□□□□□ -0.23
COPG1-208ENST00000513965 SMAD3P84022 425 aaKnown RBP13.64□□□□□ -0.23
COPG1-208ENST00000513965 UBE3CQ15386 1083 aa13.64□□□□□ -0.23
COPG1-208ENST00000513965 C1orf53Q5VUE5 145 aa13.64□□□□□ -0.23
COPG1-208ENST00000513965 VTI1AQ96AJ9 217 aa13.64□□□□□ -0.23
COPG1-208ENST00000513965 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.64□□□□□ -0.23
COPG1-208ENST00000513965 MKNK2Q9HBH9 465 aa13.64□□□□□ -0.23
COPG1-208ENST00000513965 ZNF214Q9UL59 606 aaPredicted RBP13.64□□□□□ -0.23
COPG1-208ENST00000513965 DDX19BQ9UMR2 479 aa13.64□□□□□ -0.23
COPG1-208ENST00000513965 RIPK3Q9Y572 518 aa13.64□□□□□ -0.23
COPG1-208ENST00000513965 CTDP1Q9Y5B0 961 aaPredicted RBP13.64□□□□□ -0.23
COPG1-208ENST00000513965 RLFQ13129 1914 aa13.63□□□□□ -0.23
COPG1-208ENST00000513965 AKR1A1P14550 325 aa13.63□□□□□ -0.23
COPG1-208ENST00000513965 SNRNP48Q6IEG0 339 aaKnown RBP13.63□□□□□ -0.23
COPG1-208ENST00000513965 ZSCAN25Q6NSZ9 544 aa13.63□□□□□ -0.23
COPG1-208ENST00000513965 CHMP4CQ96CF2 233 aa13.63□□□□□ -0.23
COPG1-208ENST00000513965 SLF1Q9BQI6 1058 aa13.63□□□□□ -0.23
COPG1-208ENST00000513965 STARD7Q9NQZ5 370 aa13.63□□□□□ -0.23
COPG1-208ENST00000513965 CLIP2Q9UDT6 1046 aa13.63□□□□□ -0.23
COPG1-208ENST00000513965 NRBP1Q9UHY1 535 aa13.63□□□□□ -0.23
COPG1-208ENST00000513965 ZHX1Q9UKY1 873 aaPredicted RBP13.63□□□□□ -0.23
COPG1-208ENST00000513965 DIS3Q9Y2L1 958 aaKnown RBP13.63□□□□□ -0.23
COPG1-208ENST00000513965 SMCHD1A6NHR9 2005 aa13.63□□□□□ -0.23
COPG1-208ENST00000513965 DCDC2CA8MYV0 355 aa13.62□□□□□ -0.23
COPG1-208ENST00000513965 F5H6K3 240 aa13.62□□□□□ -0.23
COPG1-208ENST00000513965 KIAA0355O15063 1070 aa13.62□□□□□ -0.23
COPG1-208ENST00000513965 SNAI1O95863 264 aaPredicted RBP13.62□□□□□ -0.23
COPG1-208ENST00000513965 FOSL2P15408 326 aa13.62□□□□□ -0.23
COPG1-208ENST00000513965 ACLYP53396 1101 aa13.62□□□□□ -0.23
COPG1-208ENST00000513965 IRX5P78411 483 aaPredicted RBP13.62□□□□□ -0.23
COPG1-208ENST00000513965 FPGSQ05932 587 aa13.62□□□□□ -0.23
COPG1-208ENST00000513965 KLRC3Q07444 240 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms