RNA–Protein interactions for RNA: ENST00000512665.5

NEDD9-213, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-213ENST00000512665 KCNA10Q16322 511 aa12.18□□□□□ -0.46
NEDD9-213ENST00000512665 PKN1Q16512 942 aa12.18□□□□□ -0.46
NEDD9-213ENST00000512665 ATP2B3Q16720 1220 aa12.18□□□□□ -0.46
NEDD9-213ENST00000512665 SHROOM1Q2M3G4 852 aaPredicted RBP12.18□□□□□ -0.46
NEDD9-213ENST00000512665 SAMD1Q6SPF0 538 aaPredicted RBP12.18□□□□□ -0.46
NEDD9-213ENST00000512665 RPUSD2Q8IZ73 545 aaKnown RBP12.18□□□□□ -0.46
NEDD9-213ENST00000512665 MB21D1Q8N884 522 aa12.18□□□□□ -0.46
NEDD9-213ENST00000512665 PCSK9Q8NBP7 692 aaKnown RBP12.18□□□□□ -0.46
NEDD9-213ENST00000512665 KLHDC4Q8TBB5 520 aa12.18□□□□□ -0.46
NEDD9-213ENST00000512665 FEZ1Q99689 392 aa12.18□□□□□ -0.46
NEDD9-213ENST00000512665 TINF2Q9BSI4 451 aa12.18□□□□□ -0.46
NEDD9-213ENST00000512665 HIPK3Q9H422 1215 aa12.18□□□□□ -0.46
NEDD9-213ENST00000512665 ABCF2Q9UG63 623 aa12.18□□□□□ -0.46
NEDD9-213ENST00000512665 CACNA1BQ00975 2339 aa12.18□□□□□ -0.46
NEDD9-213ENST00000512665 GDF11O95390 407 aa12.17□□□□□ -0.46
NEDD9-213ENST00000512665 ATG9AQ7Z3C6 839 aa12.17□□□□□ -0.46
NEDD9-213ENST00000512665 BMP8AQ7Z5Y6 402 aa12.17□□□□□ -0.46
NEDD9-213ENST00000512665 MSL3Q8N5Y2 521 aaKnown RBP12.17□□□□□ -0.46
NEDD9-213ENST00000512665 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.17□□□□□ -0.46
NEDD9-213ENST00000512665 PHOSPHO2Q8TCD6 241 aa12.17□□□□□ -0.46
NEDD9-213ENST00000512665 HOXC10Q9NYD6 342 aa12.17□□□□□ -0.46
NEDD9-213ENST00000512665 PRKAG3Q9UGI9 489 aa12.17□□□□□ -0.46
NEDD9-213ENST00000512665 CACNA1HO95180 2353 aa12.16□□□□□ -0.46
NEDD9-213ENST00000512665 IL16Q14005 1332 aa12.16□□□□□ -0.46
NEDD9-213ENST00000512665 KMT2BQ9UMN6 2715 aaPredicted RBP12.16□□□□□ -0.46
NEDD9-213ENST00000512665 GRXCR2A6NFK2 248 aa12.16□□□□□ -0.46
NEDD9-213ENST00000512665 DUSP11O75319 330 aaKnown RBP12.16□□□□□ -0.46
NEDD9-213ENST00000512665 FCER1AP12319 257 aa12.16□□□□□ -0.46
NEDD9-213ENST00000512665 RFX5P48382 616 aaPredicted RBP12.16□□□□□ -0.46
NEDD9-213ENST00000512665 CCDC102BQ68D86 513 aa12.16□□□□□ -0.46
NEDD9-213ENST00000512665 ERICH6Q7L0X2 663 aa12.16□□□□□ -0.46
NEDD9-213ENST00000512665 TEX11Q8IYF3 940 aa12.16□□□□□ -0.46
NEDD9-213ENST00000512665 SLC43A3Q8NBI5 491 aa12.16□□□□□ -0.46
NEDD9-213ENST00000512665 VWCEQ96DN2 955 aa12.16□□□□□ -0.46
NEDD9-213ENST00000512665 SLC9A7Q96T83 725 aa12.16□□□□□ -0.46
NEDD9-213ENST00000512665 SEZ6LQ9BYH1 1024 aa12.16□□□□□ -0.46
NEDD9-213ENST00000512665 TRIM34Q9BYJ4 488 aa12.16□□□□□ -0.46
NEDD9-213ENST00000512665 RPAP3Q9H6T3 665 aaPredicted RBP12.16□□□□□ -0.46
NEDD9-213ENST00000512665 CNPY2Q9Y2B0 182 aa12.16□□□□□ -0.46
NEDD9-213ENST00000512665 FOCADQ5VW36 1801 aa12.16□□□□□ -0.46
NEDD9-213ENST00000512665 ZNF536O15090 1300 aa12.15□□□□□ -0.46
NEDD9-213ENST00000512665 EPG5Q9HCE0 2579 aa12.15□□□□□ -0.46
NEDD9-213ENST00000512665 C19orf67A6NJJ6 358 aa12.15□□□□□ -0.46
NEDD9-213ENST00000512665 VAMP4O75379 141 aa12.15□□□□□ -0.46
NEDD9-213ENST00000512665 CIAO1O76071 339 aa12.15□□□□□ -0.46
NEDD9-213ENST00000512665 RGS20O76081 388 aa12.15□□□□□ -0.46
NEDD9-213ENST00000512665 GH2P01242 217 aa12.15□□□□□ -0.46
NEDD9-213ENST00000512665 ASGR1P07306 291 aa12.15□□□□□ -0.46
NEDD9-213ENST00000512665 IL9P15248 144 aa12.15□□□□□ -0.46
NEDD9-213ENST00000512665 TAL1P17542 331 aaPredicted RBP12.15□□□□□ -0.46
NEDD9-213ENST00000512665 NKX3-2P78367 333 aa12.15□□□□□ -0.46
NEDD9-213ENST00000512665 COG2Q14746 738 aa12.15□□□□□ -0.46
NEDD9-213ENST00000512665 CCDC27Q2M243 656 aa12.15□□□□□ -0.46
NEDD9-213ENST00000512665 PTCRAQ6ISU1 281 aaPredicted RBP12.15□□□□□ -0.46
NEDD9-213ENST00000512665 ATF7IPQ6VMQ6 1270 aa12.15□□□□□ -0.46
NEDD9-213ENST00000512665 CRACR2BQ8N4Y2 399 aaPredicted RBP12.15□□□□□ -0.46
NEDD9-213ENST00000512665 ARNTL2Q8WYA1 636 aa12.15□□□□□ -0.46
NEDD9-213ENST00000512665 LENG1Q96BZ8 264 aaPredicted RBP12.15□□□□□ -0.46
NEDD9-213ENST00000512665 NSUN4Q96CB9 384 aaKnown RBP12.15□□□□□ -0.46
NEDD9-213ENST00000512665 UPF3BQ9BZI7 483 aaKnown RBP12.15□□□□□ -0.46
NEDD9-213ENST00000512665 IRF2BPLQ9H1B7 796 aa12.15□□□□□ -0.46
NEDD9-213ENST00000512665 UPF3AQ9H1J1 476 aaKnown RBP12.15□□□□□ -0.46
NEDD9-213ENST00000512665 ZP2Q05996 745 aa12.14□□□□□ -0.47
NEDD9-213ENST00000512665 TCF15Q12870 199 aa12.14□□□□□ -0.47
NEDD9-213ENST00000512665 ZYXQ15942 572 aaKnown RBP12.14□□□□□ -0.47
NEDD9-213ENST00000512665 ZNF792Q3KQV3 632 aa12.14□□□□□ -0.47
NEDD9-213ENST00000512665 ANKS1AQ92625 1134 aa12.14□□□□□ -0.47
NEDD9-213ENST00000512665 NOC4LQ9BVI4 516 aaKnown RBP12.14□□□□□ -0.47
NEDD9-213ENST00000512665 WNT8AQ9H1J5 351 aa12.14□□□□□ -0.47
NEDD9-213ENST00000512665 CERS4Q9HA82 394 aa12.14□□□□□ -0.47
NEDD9-213ENST00000512665 FAM184BQ9ULE4 1060 aa12.14□□□□□ -0.47
NEDD9-213ENST00000512665 MYO15AQ9UKN7 3530 aa12.14□□□□□ -0.47
NEDD9-213ENST00000512665 FLT1P17948 1338 aa12.13□□□□□ -0.47
NEDD9-213ENST00000512665 UMODL1Q5DID0 1318 aa12.13□□□□□ -0.47
NEDD9-213ENST00000512665 MYADML2A6NDP7 307 aa12.13□□□□□ -0.47
NEDD9-213ENST00000512665 ZBBXA8MT70 800 aa12.13□□□□□ -0.47
NEDD9-213ENST00000512665 PROB1E7EW31 1015 aa12.13□□□□□ -0.47
NEDD9-213ENST00000512665 SLC25A27O95847 323 aa12.13□□□□□ -0.47
NEDD9-213ENST00000512665 PLCG2P16885 1265 aa12.13□□□□□ -0.47
NEDD9-213ENST00000512665 KCNA5P22460 613 aa12.13□□□□□ -0.47
NEDD9-213ENST00000512665 HERC4Q5GLZ8 1057 aaPredicted RBP12.13□□□□□ -0.47
NEDD9-213ENST00000512665 TATDN1Q6P1N9 297 aa12.13□□□□□ -0.47
NEDD9-213ENST00000512665 NEK9Q8TD19 979 aa12.13□□□□□ -0.47
NEDD9-213ENST00000512665 CEP126Q9P2H0 1117 aa12.13□□□□□ -0.47
NEDD9-213ENST00000512665 FAM50BQ9Y247 325 aa12.13□□□□□ -0.47
NEDD9-213ENST00000512665 ARHGEF15O94989 841 aa12.12□□□□□ -0.47
NEDD9-213ENST00000512665 GJA9P57773 515 aa12.12□□□□□ -0.47
NEDD9-213ENST00000512665 SLC4A10Q6U841 1118 aa12.12□□□□□ -0.47
NEDD9-213ENST00000512665 NCAPG2Q86XI2 1143 aa12.12□□□□□ -0.47
NEDD9-213ENST00000512665 CCER1Q8TC90 406 aaPredicted RBP12.12□□□□□ -0.47
NEDD9-213ENST00000512665 SH3RF3Q8TEJ3 882 aaPredicted RBP12.12□□□□□ -0.47
NEDD9-213ENST00000512665 SPC25Q9HBM1 224 aa12.12□□□□□ -0.47
NEDD9-213ENST00000512665 PTPRZ1P23471 2315 aaPredicted RBP12.12□□□□□ -0.47
NEDD9-213ENST00000512665 CDK5RAP2Q96SN8 1893 aa12.12□□□□□ -0.47
NEDD9-213ENST00000512665 ZNFX1Q9P2E3 1918 aaKnown RBP12.11□□□□□ -0.47
NEDD9-213ENST00000512665 TECTAO75443 2155 aa12.11□□□□□ -0.47
NEDD9-213ENST00000512665 KIF28PB7ZC32 967 aa12.11□□□□□ -0.47
NEDD9-213ENST00000512665 CABYRO75952 493 aa12.11□□□□□ -0.47
NEDD9-213ENST00000512665 HLA-DOAP06340 250 aa12.11□□□□□ -0.47
NEDD9-213ENST00000512665 C6orf222P0C671 652 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms