RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.02□□□□□ -0.65
MSH3-203ENST00000512531 CARNS1A5YM72 827 aa11.02□□□□□ -0.65
MSH3-203ENST00000512531 M0R2C6 588 aa11.02□□□□□ -0.65
MSH3-203ENST00000512531 IGF2BP3O00425 579 aaKnown RBP eCLIP11.02□□□□□ -0.65
MSH3-203ENST00000512531 CAVIN2O95810 425 aa11.02□□□□□ -0.65
MSH3-203ENST00000512531 FGFR2P21802 821 aa11.02□□□□□ -0.65
MSH3-203ENST00000512531 MCAMP43121 646 aa11.02□□□□□ -0.65
MSH3-203ENST00000512531 EXOSC10Q01780 885 aaKnown RBP11.02□□□□□ -0.65
MSH3-203ENST00000512531 PRKG1Q13976 671 aa11.02□□□□□ -0.65
MSH3-203ENST00000512531 ARHGEF6Q15052 776 aa11.02□□□□□ -0.65
MSH3-203ENST00000512531 ALX1Q15699 326 aa11.02□□□□□ -0.65
MSH3-203ENST00000512531 TMTC2Q8N394 836 aa11.02□□□□□ -0.65
MSH3-203ENST00000512531 WASF1Q92558 559 aa11.02□□□□□ -0.65
MSH3-203ENST00000512531 OSBP2Q969R2 916 aa11.02□□□□□ -0.65
MSH3-203ENST00000512531 SPATA32Q96LK8 384 aa11.02□□□□□ -0.65
MSH3-203ENST00000512531 MTA3Q9BTC8 594 aa11.02□□□□□ -0.65
MSH3-203ENST00000512531 NAPBQ9H115 298 aa11.02□□□□□ -0.65
MSH3-203ENST00000512531 DDX19AQ9NUU7 478 aaKnown RBP11.02□□□□□ -0.65
MSH3-203ENST00000512531 LRP2BPQ9P2M1 347 aa11.02□□□□□ -0.65
MSH3-203ENST00000512531 DENND2AQ9ULE3 1009 aa11.02□□□□□ -0.65
MSH3-203ENST00000512531 CNPY2Q9Y2B0 182 aa11.02□□□□□ -0.65
MSH3-203ENST00000512531 PTPN22Q9Y2R2 807 aa11.02□□□□□ -0.65
MSH3-203ENST00000512531 NDUFB9Q9Y6M9 179 aa11.02□□□□□ -0.65
MSH3-203ENST00000512531 RBBP6Q7Z6E9 1792 aaKnown RBP11.02□□□□□ -0.65
MSH3-203ENST00000512531 SYCE3A1L190 88 aa11.01□□□□□ -0.65
MSH3-203ENST00000512531 PATL2C9JE40 543 aaKnown RBP11.01□□□□□ -0.65
MSH3-203ENST00000512531 USP2O75604 605 aaPredicted RBP11.01□□□□□ -0.65
MSH3-203ENST00000512531 LARGE1O95461 756 aa11.01□□□□□ -0.65
MSH3-203ENST00000512531 FGAP02671 866 aa11.01□□□□□ -0.65
MSH3-203ENST00000512531 CCDC192P0DO97 292 aa11.01□□□□□ -0.65
MSH3-203ENST00000512531 PCP11498 1178 aaKnown RBP11.01□□□□□ -0.65
MSH3-203ENST00000512531 PDE6AP16499 860 aa11.01□□□□□ -0.65
MSH3-203ENST00000512531 MSNP26038 577 aaKnown RBP11.01□□□□□ -0.65
MSH3-203ENST00000512531 TRIM29Q14134 588 aa11.01□□□□□ -0.65
MSH3-203ENST00000512531 SMARCC2Q8TAQ2 1214 aa11.01□□□□□ -0.65
MSH3-203ENST00000512531 CLMNQ96JQ2 1002 aa11.01□□□□□ -0.65
MSH3-203ENST00000512531 PRMT6Q96LA8 375 aaPredicted RBP11.01□□□□□ -0.65
MSH3-203ENST00000512531 CCDC196A0A1B0GTZ2 297 aa11□□□□□ -0.65
MSH3-203ENST00000512531 CFAP99D6REC4 459 aa11□□□□□ -0.65
MSH3-203ENST00000512531 CTAGE5O15320 804 aa11□□□□□ -0.65
MSH3-203ENST00000512531 PRC1O43663 620 aa11□□□□□ -0.65
MSH3-203ENST00000512531 SLC3A2P08195 630 aaKnown RBP11□□□□□ -0.65
MSH3-203ENST00000512531 EVCP57679 992 aa11□□□□□ -0.65
MSH3-203ENST00000512531 SP3Q02447 781 aa11□□□□□ -0.65
MSH3-203ENST00000512531 DNM1Q05193 864 aaKnown RBP11□□□□□ -0.65
MSH3-203ENST00000512531 RASA3Q14644 834 aa11□□□□□ -0.65
MSH3-203ENST00000512531 FOXD4L6Q3SYB3 417 aaPredicted RBP11□□□□□ -0.65
MSH3-203ENST00000512531 NBPF12Q5TAG4 269 aaPredicted RBP11□□□□□ -0.65
MSH3-203ENST00000512531 FOXD4L3Q6VB84 417 aaPredicted RBP11□□□□□ -0.65
MSH3-203ENST00000512531 PACS2Q86VP3 889 aa11□□□□□ -0.65
MSH3-203ENST00000512531 TDRD7Q8NHU6 1098 aaKnown RBP11□□□□□ -0.65
MSH3-203ENST00000512531 PPP1R9BQ96SB3 815 aa11□□□□□ -0.65
MSH3-203ENST00000512531 EFCC1Q9HA90 598 aa11□□□□□ -0.65
MSH3-203ENST00000512531 ZCCHC17Q9NP64 241 aaKnown RBP11□□□□□ -0.65
MSH3-203ENST00000512531 TMEM63CQ9P1W3 806 aa11□□□□□ -0.65
MSH3-203ENST00000512531 ZNF532Q9HCE3 1301 aa11□□□□□ -0.65
MSH3-203ENST00000512531 A0A1B0GUL6 1792 aa10.99□□□□□ -0.65
MSH3-203ENST00000512531 PTPDC1A2A3K4 754 aa10.99□□□□□ -0.65
MSH3-203ENST00000512531 PHKA1P46020 1223 aa10.99□□□□□ -0.65
MSH3-203ENST00000512531 TDO2P48775 406 aa10.99□□□□□ -0.65
MSH3-203ENST00000512531 HDLBPQ00341 1268 aaKnown RBP10.99□□□□□ -0.65
MSH3-203ENST00000512531 VAC14Q08AM6 782 aa10.99□□□□□ -0.65
MSH3-203ENST00000512531 APOBRQ0VD83 1088 aa10.99□□□□□ -0.65
MSH3-203ENST00000512531 SCRN1Q12765 414 aa10.99□□□□□ -0.65
MSH3-203ENST00000512531 CRHR2Q13324 411 aa10.99□□□□□ -0.65
MSH3-203ENST00000512531 PPP2R5BQ15173 497 aa10.99□□□□□ -0.65
MSH3-203ENST00000512531 SWT1Q5T5J6 900 aaKnown RBP10.99□□□□□ -0.65
MSH3-203ENST00000512531 SPTY2D1Q68D10 685 aaPredicted RBP10.99□□□□□ -0.65
MSH3-203ENST00000512531 NFXL1Q6ZNB6 911 aa10.99□□□□□ -0.65
MSH3-203ENST00000512531 BRAPQ7Z569 592 aa10.99□□□□□ -0.65
MSH3-203ENST00000512531 MAGEB6Q8N7X4 407 aa10.99□□□□□ -0.65
MSH3-203ENST00000512531 BICD2Q8TD16 824 aa10.99□□□□□ -0.65
MSH3-203ENST00000512531 TCEANC2Q96MN5 208 aa10.99□□□□□ -0.65
MSH3-203ENST00000512531 MRIQ9BWK5 157 aa10.99□□□□□ -0.65
MSH3-203ENST00000512531 CCDC39Q9UFE4 941 aa10.99□□□□□ -0.65
MSH3-203ENST00000512531 HTTP42858 3142 aa10.99□□□□□ -0.65
MSH3-203ENST00000512531 CLRN2A0PK11 232 aa10.98□□□□□ -0.65
MSH3-203ENST00000512531 CCDC69A6NI79 296 aa10.98□□□□□ -0.65
MSH3-203ENST00000512531 GOLGA8BA8MQT2 603 aa10.98□□□□□ -0.65
MSH3-203ENST00000512531 GOLGA6L6A8MZA4 724 aa10.98□□□□□ -0.65
MSH3-203ENST00000512531 TPM3P06753 285 aa10.98□□□□□ -0.65
MSH3-203ENST00000512531 RFX1P22670 979 aa10.98□□□□□ -0.65
MSH3-203ENST00000512531 PDIA3P30101 505 aaKnown RBP10.98□□□□□ -0.65
MSH3-203ENST00000512531 TNNI2P48788 182 aa10.98□□□□□ -0.65
MSH3-203ENST00000512531 GTF2A2P52657 109 aa10.98□□□□□ -0.65
MSH3-203ENST00000512531 RCAN1P53805 252 aa10.98□□□□□ -0.65
MSH3-203ENST00000512531 GNL2Q13823 731 aaKnown RBP10.98□□□□□ -0.65
MSH3-203ENST00000512531 ZRSR1Q15695 479 aaKnown RBP10.98□□□□□ -0.65
MSH3-203ENST00000512531 HABP4Q5JVS0 413 aaKnown RBP10.98□□□□□ -0.65
MSH3-203ENST00000512531 CCDC73Q6ZRK6 1079 aa10.98□□□□□ -0.65
MSH3-203ENST00000512531 MFSD6Q6ZSS7 791 aa10.98□□□□□ -0.65
MSH3-203ENST00000512531 CERS3Q8IU89 383 aa10.98□□□□□ -0.65
MSH3-203ENST00000512531 AMOTL1Q8IY63 956 aa10.98□□□□□ -0.65
MSH3-203ENST00000512531 HELBQ8NG08 1087 aaPredicted RBP10.98□□□□□ -0.65
MSH3-203ENST00000512531 C8orf76Q96K31 380 aa10.98□□□□□ -0.65
MSH3-203ENST00000512531 TEPSINQ96N21 525 aa10.98□□□□□ -0.65
MSH3-203ENST00000512531 UCN2Q96RP3 112 aa10.98□□□□□ -0.65
MSH3-203ENST00000512531 PTPN18Q99952 460 aa10.98□□□□□ -0.65
MSH3-203ENST00000512531 PUS7LQ9H0K6 701 aaKnown RBP10.98□□□□□ -0.65
MSH3-203ENST00000512531 NUP62CLQ9H1M0 184 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms