RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 PPFIA3O75145 1194 aa15.12■□□□□ 0.01
DEPDC1B-206ENST00000512452 PPP6R2O75170 966 aa15.12■□□□□ 0.01
DEPDC1B-206ENST00000512452 CCDC192P0DO97 292 aa15.12■□□□□ 0.01
DEPDC1B-206ENST00000512452 RASA1P20936 1047 aa15.12■□□□□ 0.01
DEPDC1B-206ENST00000512452 NOSTRINQ8IVI9 506 aa15.12■□□□□ 0.01
DEPDC1B-206ENST00000512452 MAPKAPK5Q8IW41 473 aa15.12■□□□□ 0.01
DEPDC1B-206ENST00000512452 CERS5Q8N5B7 392 aa15.12■□□□□ 0.01
DEPDC1B-206ENST00000512452 DEFB123Q8N688 67 aa15.12■□□□□ 0.01
DEPDC1B-206ENST00000512452 NEDD1Q8NHV4 660 aa15.12■□□□□ 0.01
DEPDC1B-206ENST00000512452 DPF3Q92784 378 aa15.12■□□□□ 0.01
DEPDC1B-206ENST00000512452 TEKT1Q969V4 418 aa15.12■□□□□ 0.01
DEPDC1B-206ENST00000512452 ARMC5Q96C12 935 aa15.12■□□□□ 0.01
DEPDC1B-206ENST00000512452 AIFM3Q96NN9 605 aa15.12■□□□□ 0.01
DEPDC1B-206ENST00000512452 PANK2Q9BZ23 570 aa15.12■□□□□ 0.01
DEPDC1B-206ENST00000512452 KAT14Q9H8E8 782 aa15.12■□□□□ 0.01
DEPDC1B-206ENST00000512452 DACT1Q9NYF0 836 aa15.12■□□□□ 0.01
DEPDC1B-206ENST00000512452 TTF2Q9UNY4 1162 aaKnown RBP15.12■□□□□ 0.01
DEPDC1B-206ENST00000512452 A0A1W2PPC1 479 aa15.11■□□□□ 0.01
DEPDC1B-206ENST00000512452 CAVIN2O95810 425 aa15.11■□□□□ 0.01
DEPDC1B-206ENST00000512452 TSPY3P0CV98 308 aa15.11■□□□□ 0.01
DEPDC1B-206ENST00000512452 TSPY8P0CW00 308 aa15.11■□□□□ 0.01
DEPDC1B-206ENST00000512452 ME1P48163 572 aa15.11■□□□□ 0.01
DEPDC1B-206ENST00000512452 NOVP48745 357 aa15.11■□□□□ 0.01
DEPDC1B-206ENST00000512452 GMPSP49915 693 aaPredicted RBP15.11■□□□□ 0.01
DEPDC1B-206ENST00000512452 FAM160A1Q05DH4 1040 aa15.11■□□□□ 0.01
DEPDC1B-206ENST00000512452 SLC39A14Q15043 492 aa15.11■□□□□ 0.01
DEPDC1B-206ENST00000512452 SF3A1Q15459 793 aaKnown RBP15.11■□□□□ 0.01
DEPDC1B-206ENST00000512452 FAM47AQ5JRC9 791 aa15.11■□□□□ 0.01
DEPDC1B-206ENST00000512452 CCAR1Q8IX12 1150 aaKnown RBP15.11■□□□□ 0.01
DEPDC1B-206ENST00000512452 NIM1KQ8IY84 436 aa15.11■□□□□ 0.01
DEPDC1B-206ENST00000512452 TRPM4Q8TD43 1214 aa15.11■□□□□ 0.01
DEPDC1B-206ENST00000512452 MRPS27Q92552 414 aaKnown RBP15.11■□□□□ 0.01
DEPDC1B-206ENST00000512452 LZTS2Q9BRK4 669 aa15.11■□□□□ 0.01
DEPDC1B-206ENST00000512452 VPS33BQ9H267 617 aa15.11■□□□□ 0.01
DEPDC1B-206ENST00000512452 TNMDQ9H2S6 317 aa15.11■□□□□ 0.01
DEPDC1B-206ENST00000512452 CDK8P49336 464 aa15.1■□□□□ 0.01
DEPDC1B-206ENST00000512452 PLCD1P51178 756 aa15.1■□□□□ 0.01
DEPDC1B-206ENST00000512452 KIAA2012Q0VF49 1180 aa15.1■□□□□ 0.01
DEPDC1B-206ENST00000512452 GRM4Q14833 912 aa15.1■□□□□ 0.01
DEPDC1B-206ENST00000512452 DOK7Q18PE1 504 aa15.1■□□□□ 0.01
DEPDC1B-206ENST00000512452 RILPL1Q5EBL4 403 aa15.1■□□□□ 0.01
DEPDC1B-206ENST00000512452 PPP4R3BQ5MIZ7 849 aa15.1■□□□□ 0.01
DEPDC1B-206ENST00000512452 OTOP1Q7RTM1 612 aa15.1■□□□□ 0.01
DEPDC1B-206ENST00000512452 KRT26Q7Z3Y9 468 aa15.1■□□□□ 0.01
DEPDC1B-206ENST00000512452 DYNLL2Q96FJ2 89 aa15.1■□□□□ 0.01
DEPDC1B-206ENST00000512452 ZDHHC15Q96MV8 337 aa15.1■□□□□ 0.01
DEPDC1B-206ENST00000512452 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.1■□□□□ 0.01
DEPDC1B-206ENST00000512452 SWAP70Q9UH65 585 aa15.1■□□□□ 0.01
DEPDC1B-206ENST00000512452 PCDHA7Q9UN72 937 aa15.1■□□□□ 0.01
DEPDC1B-206ENST00000512452 CLIC4Q9Y696 253 aa15.1■□□□□ 0.01
DEPDC1B-206ENST00000512452 CNTNAP5Q8WYK1 1306 aa15.1■□□□□ 0.01
DEPDC1B-206ENST00000512452 MYH1P12882 1939 aa15.09■□□□□ 0.01
DEPDC1B-206ENST00000512452 USP17L3A6NCW0 530 aa15.09■□□□□ 0.01
DEPDC1B-206ENST00000512452 USP17L4A6NCW7 530 aa15.09■□□□□ 0.01
DEPDC1B-206ENST00000512452 CMA1P23946 247 aa15.09■□□□□ 0.01
DEPDC1B-206ENST00000512452 SMARCA1P28370 1054 aa15.09■□□□□ 0.01
DEPDC1B-206ENST00000512452 CEBPZQ03701 1054 aaKnown RBP15.09■□□□□ 0.01
DEPDC1B-206ENST00000512452 EVX2Q03828 476 aa15.09■□□□□ 0.01
DEPDC1B-206ENST00000512452 PKN1Q16512 942 aa15.09■□□□□ 0.01
DEPDC1B-206ENST00000512452 DACT2Q5SW24 774 aa15.09■□□□□ 0.01
DEPDC1B-206ENST00000512452 USP17L1Q7RTZ2 530 aa15.09■□□□□ 0.01
DEPDC1B-206ENST00000512452 DIS3L2Q8IYB7 885 aaKnown RBP15.09■□□□□ 0.01
DEPDC1B-206ENST00000512452 PNMA1Q8ND90 353 aa15.09■□□□□ 0.01
DEPDC1B-206ENST00000512452 ENGASEQ8NFI3 743 aa15.09■□□□□ 0.01
DEPDC1B-206ENST00000512452 FBXW7Q969H0 707 aa15.09■□□□□ 0.01
DEPDC1B-206ENST00000512452 BRMS1Q9HCU9 246 aa15.09■□□□□ 0.01
DEPDC1B-206ENST00000512452 SH3GLB2Q9NR46 395 aa15.09■□□□□ 0.01
DEPDC1B-206ENST00000512452 IL17RBQ9NRM6 502 aa15.09■□□□□ 0.01
DEPDC1B-206ENST00000512452 GJB4Q9NTQ9 266 aa15.09■□□□□ 0.01
DEPDC1B-206ENST00000512452 SAP30BPQ9UHR5 308 aaKnown RBP15.09■□□□□ 0.01
DEPDC1B-206ENST00000512452 FAM237AA0A1B0GTK4 181 aa15.08■□□□□ 0
DEPDC1B-206ENST00000512452 ECE2O60344 883 aa15.08■□□□□ 0
DEPDC1B-206ENST00000512452 KINO60870 393 aaKnown RBP15.08■□□□□ 0
DEPDC1B-206ENST00000512452 NR1I2O75469 434 aa15.08■□□□□ 0
DEPDC1B-206ENST00000512452 WDHD1O75717 1129 aaPredicted RBP15.08■□□□□ 0
DEPDC1B-206ENST00000512452 GUCY1A2P33402 732 aa15.08■□□□□ 0
DEPDC1B-206ENST00000512452 GABPAQ06546 454 aa15.08■□□□□ 0
DEPDC1B-206ENST00000512452 GPR153Q6NV75 609 aa15.08■□□□□ 0
DEPDC1B-206ENST00000512452 FSIP1Q8NA03 581 aa15.08■□□□□ 0
DEPDC1B-206ENST00000512452 PHF20Q9BVI0 1012 aa15.08■□□□□ 0
DEPDC1B-206ENST00000512452 FTOQ9C0B1 505 aaKnown RBP eCLIP15.08■□□□□ 0
DEPDC1B-206ENST00000512452 EHD4Q9H223 541 aa15.08■□□□□ 0
DEPDC1B-206ENST00000512452 USP40Q9NVE5 1235 aa15.08■□□□□ 0
DEPDC1B-206ENST00000512452 SERPINA10Q9UK55 444 aa15.08■□□□□ 0
DEPDC1B-206ENST00000512452 CEP131Q9UPN4 1083 aa15.08■□□□□ 0
DEPDC1B-206ENST00000512452 PTPN22Q9Y2R2 807 aa15.08■□□□□ 0
DEPDC1B-206ENST00000512452 MYH6P13533 1939 aa15.07■□□□□ 0
DEPDC1B-206ENST00000512452 NMT2O60551 498 aa15.07■□□□□ 0
DEPDC1B-206ENST00000512452 CUTAO60888 179 aa15.07■□□□□ 0
DEPDC1B-206ENST00000512452 PLEKHA8P1O95397 391 aa15.07■□□□□ 0
DEPDC1B-206ENST00000512452 BMP15O95972 392 aa15.07■□□□□ 0
DEPDC1B-206ENST00000512452 TOP1P11387 765 aaKnown RBP15.07■□□□□ 0
DEPDC1B-206ENST00000512452 KRT2P35908 639 aa15.07■□□□□ 0
DEPDC1B-206ENST00000512452 CRKP46108 304 aa15.07■□□□□ 0
DEPDC1B-206ENST00000512452 TM4SF4P48230 202 aa15.07■□□□□ 0
DEPDC1B-206ENST00000512452 CXCL9Q07325 125 aa15.07■□□□□ 0
DEPDC1B-206ENST00000512452 PTPAQ15257 358 aa15.07■□□□□ 0
DEPDC1B-206ENST00000512452 PFKFB3Q16875 520 aaPredicted RBP15.07■□□□□ 0
DEPDC1B-206ENST00000512452 AXDND1Q5T1B0 1012 aaPredicted RBP15.07■□□□□ 0
DEPDC1B-206ENST00000512452 APOBEC3HQ6NTF7 200 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms