RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 USP17L4A6NCW7 530 aa14.68□□□□□ -0.06
PCDHA4-202ENST00000512229 CETN3O15182 167 aa14.68□□□□□ -0.06
PCDHA4-202ENST00000512229 CDK8P49336 464 aa14.68□□□□□ -0.06
PCDHA4-202ENST00000512229 USP17L1Q7RTZ2 530 aa14.68□□□□□ -0.06
PCDHA4-202ENST00000512229 IL25Q9H293 177 aa14.68□□□□□ -0.06
PCDHA4-202ENST00000512229 ZDHHC9Q9Y397 364 aa14.68□□□□□ -0.06
PCDHA4-202ENST00000512229 STK24Q9Y6E0 443 aa14.68□□□□□ -0.06
PCDHA4-202ENST00000512229 PLEKHG2Q9H7P9 1386 aa14.68□□□□□ -0.06
PCDHA4-202ENST00000512229 CLRN2A0PK11 232 aa14.68□□□□□ -0.06
PCDHA4-202ENST00000512229 PRKG1Q13976 671 aa14.68□□□□□ -0.06
PCDHA4-202ENST00000512229 KARSQ15046 597 aaKnown RBP14.68□□□□□ -0.06
PCDHA4-202ENST00000512229 IFI16Q16666 785 aaKnown RBP14.68□□□□□ -0.06
PCDHA4-202ENST00000512229 STOX1Q6ZVD7 989 aa14.68□□□□□ -0.06
PCDHA4-202ENST00000512229 RRAGDQ9NQL2 400 aaPredicted RBP14.68□□□□□ -0.06
PCDHA4-202ENST00000512229 TMEM232C9JQI7 657 aa14.67□□□□□ -0.06
PCDHA4-202ENST00000512229 NTSR2O95665 410 aa14.67□□□□□ -0.06
PCDHA4-202ENST00000512229 ZNF827Q17R98 1081 aa14.67□□□□□ -0.06
PCDHA4-202ENST00000512229 USP17L2Q6R6M4 530 aa14.67□□□□□ -0.06
PCDHA4-202ENST00000512229 SH3RF3Q8TEJ3 882 aaPredicted RBP14.67□□□□□ -0.06
PCDHA4-202ENST00000512229 PI4KBQ9UBF8 816 aa14.67□□□□□ -0.06
PCDHA4-202ENST00000512229 KDM6AO15550 1401 aaPredicted RBP14.67□□□□□ -0.06
PCDHA4-202ENST00000512229 NEDD4P46934 1319 aa14.67□□□□□ -0.06
PCDHA4-202ENST00000512229 TACC1O75410 805 aa14.67□□□□□ -0.06
PCDHA4-202ENST00000512229 SYT10Q6XYQ8 523 aa14.67□□□□□ -0.06
PCDHA4-202ENST00000512229 TMEM87AQ8NBN3 555 aa14.67□□□□□ -0.06
PCDHA4-202ENST00000512229 RASGRP4Q8TDF6 673 aa14.67□□□□□ -0.06
PCDHA4-202ENST00000512229 SYMPKQ92797 1274 aaKnown RBP14.67□□□□□ -0.06
PCDHA4-202ENST00000512229 HOMER2Q9NSB8 354 aa14.67□□□□□ -0.06
PCDHA4-202ENST00000512229 MYOM1P52179 1685 aa14.67□□□□□ -0.06
PCDHA4-202ENST00000512229 MYO5BQ9ULV0 1848 aa14.67□□□□□ -0.06
PCDHA4-202ENST00000512229 RAD17O75943 681 aa14.67□□□□□ -0.06
PCDHA4-202ENST00000512229 CYP2D6P10635 497 aa14.67□□□□□ -0.06
PCDHA4-202ENST00000512229 MYCLP12524 364 aaPredicted RBP14.67□□□□□ -0.06
PCDHA4-202ENST00000512229 HSPA1LP34931 641 aa14.67□□□□□ -0.06
PCDHA4-202ENST00000512229 LONP1P36776 959 aaKnown RBP14.67□□□□□ -0.06
PCDHA4-202ENST00000512229 NELFBQ8WX92 580 aa14.67□□□□□ -0.06
PCDHA4-202ENST00000512229 ZNF512BQ96KM6 892 aaPredicted RBP14.67□□□□□ -0.06
PCDHA4-202ENST00000512229 CSRNP2Q9H175 543 aa14.67□□□□□ -0.06
PCDHA4-202ENST00000512229 PCDHA4Q9UN74 947 aa14.67□□□□□ -0.06
PCDHA4-202ENST00000512229 PXDNQ92626 1479 aa14.67□□□□□ -0.06
PCDHA4-202ENST00000512229 ADGRB2O60241 1585 aa14.67□□□□□ -0.06
PCDHA4-202ENST00000512229 ZNF609O15014 1411 aa14.67□□□□□ -0.06
PCDHA4-202ENST00000512229 ARHGEF35A5YM69 484 aa14.66□□□□□ -0.06
PCDHA4-202ENST00000512229 SLU7O95391 586 aaKnown RBP14.66□□□□□ -0.06
PCDHA4-202ENST00000512229 RAD51AP2Q09MP3 1159 aa14.66□□□□□ -0.06
PCDHA4-202ENST00000512229 CCDC93Q567U6 631 aa14.66□□□□□ -0.06
PCDHA4-202ENST00000512229 PODNQ7Z5L7 613 aa14.66□□□□□ -0.06
PCDHA4-202ENST00000512229 NAA15Q9BXJ9 866 aaKnown RBP14.66□□□□□ -0.06
PCDHA4-202ENST00000512229 SRRTQ9BXP5 876 aaKnown RBP14.66□□□□□ -0.06
PCDHA4-202ENST00000512229 POTEB2H3BUK9 544 aa14.66□□□□□ -0.06
PCDHA4-202ENST00000512229 TRIM14Q14142 442 aa14.66□□□□□ -0.06
PCDHA4-202ENST00000512229 AMNQ9BXJ7 453 aa14.66□□□□□ -0.06
PCDHA4-202ENST00000512229 GUCA1BQ9UMX6 200 aa14.66□□□□□ -0.06
PCDHA4-202ENST00000512229 KDM4FA0A1W2PPD8 638 aa14.66□□□□□ -0.06
PCDHA4-202ENST00000512229 KRT9P35527 623 aa14.66□□□□□ -0.06
PCDHA4-202ENST00000512229 DCAF17Q5H9S7 520 aaPredicted RBP14.66□□□□□ -0.06
PCDHA4-202ENST00000512229 TTLL6Q8N841 843 aa14.66□□□□□ -0.06
PCDHA4-202ENST00000512229 DRC1Q96MC2 740 aa14.66□□□□□ -0.06
PCDHA4-202ENST00000512229 TIGD1Q96MW7 591 aa14.66□□□□□ -0.06
PCDHA4-202ENST00000512229 TAB2Q9NYJ8 693 aa14.66□□□□□ -0.06
PCDHA4-202ENST00000512229 MRVI1Q9Y6F6 885 aa14.66□□□□□ -0.06
PCDHA4-202ENST00000512229 PNPLA7Q6ZV29 1317 aa14.66□□□□□ -0.06
PCDHA4-202ENST00000512229 CTAGE9A4FU28 777 aa14.66□□□□□ -0.06
PCDHA4-202ENST00000512229 MYCNP04198 464 aaPredicted RBP14.66□□□□□ -0.06
PCDHA4-202ENST00000512229 PRPF4BQ13523 1007 aaKnown RBP14.66□□□□□ -0.06
PCDHA4-202ENST00000512229 CLEC17AQ6ZS10 378 aa14.66□□□□□ -0.06
PCDHA4-202ENST00000512229 EXOSC10Q01780 885 aaKnown RBP14.65□□□□□ -0.06
PCDHA4-202ENST00000512229 PUF60Q9UHX1 559 aaKnown RBP14.65□□□□□ -0.06
PCDHA4-202ENST00000512229 SIGLEC1Q9BZZ2 1709 aa14.65□□□□□ -0.06
PCDHA4-202ENST00000512229 PHACTR2O75167 634 aa14.65□□□□□ -0.06
PCDHA4-202ENST00000512229 PRR16Q569H4 304 aa14.65□□□□□ -0.06
PCDHA4-202ENST00000512229 DCAF15Q66K64 600 aa14.65□□□□□ -0.06
PCDHA4-202ENST00000512229 LEKR1Q6ZMV7 388 aa14.65□□□□□ -0.06
PCDHA4-202ENST00000512229 ENAHQ8N8S7 591 aaPredicted RBP14.65□□□□□ -0.06
PCDHA4-202ENST00000512229 LY9Q9HBG7 655 aa14.65□□□□□ -0.06
PCDHA4-202ENST00000512229 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.65□□□□□ -0.06
PCDHA4-202ENST00000512229 GTPBP6O43824 516 aaPredicted RBP14.65□□□□□ -0.06
PCDHA4-202ENST00000512229 PLEKHA8P1O95397 391 aa14.65□□□□□ -0.06
PCDHA4-202ENST00000512229 SPECC1LQ69YQ0 1117 aa14.65□□□□□ -0.06
PCDHA4-202ENST00000512229 INTS5Q6P9B9 1019 aaKnown RBP14.65□□□□□ -0.06
PCDHA4-202ENST00000512229 SPICE1Q8N0Z3 855 aa14.65□□□□□ -0.06
PCDHA4-202ENST00000512229 DNAI2Q9GZS0 605 aa14.65□□□□□ -0.06
PCDHA4-202ENST00000512229 FANCLQ9NW38 375 aa14.65□□□□□ -0.06
PCDHA4-202ENST00000512229 CTAGE15A4D2H0 777 aa14.64□□□□□ -0.07
PCDHA4-202ENST00000512229 FOSP01100 380 aaPredicted RBP14.64□□□□□ -0.07
PCDHA4-202ENST00000512229 CTAGE8P0CG41 777 aa14.64□□□□□ -0.07
PCDHA4-202ENST00000512229 ZNF569Q5MCW4 686 aa14.64□□□□□ -0.07
PCDHA4-202ENST00000512229 CTAGE6Q86UF2 777 aa14.64□□□□□ -0.07
PCDHA4-202ENST00000512229 SGMS1Q86VZ5 419 aa14.64□□□□□ -0.07
PCDHA4-202ENST00000512229 FOXP4Q8IVH2 680 aaPredicted RBP14.64□□□□□ -0.07
PCDHA4-202ENST00000512229 CTAGE4Q8IX94 777 aa14.64□□□□□ -0.07
PCDHA4-202ENST00000512229 PIGSQ96S52 555 aa14.64□□□□□ -0.07
PCDHA4-202ENST00000512229 FRMD4BQ9Y2L6 1034 aa14.64□□□□□ -0.07
PCDHA4-202ENST00000512229 MRPL11Q9Y3B7 192 aaKnown RBP14.64□□□□□ -0.07
PCDHA4-202ENST00000512229 ARHGAP6O43182 974 aa14.64□□□□□ -0.07
PCDHA4-202ENST00000512229 EPB41P11171 864 aaKnown RBP14.64□□□□□ -0.07
PCDHA4-202ENST00000512229 TMTC3Q6ZXV5 915 aa14.64□□□□□ -0.07
PCDHA4-202ENST00000512229 C17orf53Q8N3J3 647 aaPredicted RBP14.64□□□□□ -0.07
PCDHA4-202ENST00000512229 TBC1D7Q9P0N9 293 aa14.64□□□□□ -0.07
PCDHA4-202ENST00000512229 DDX39AO00148 427 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms