RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 ZSCAN25Q6NSZ9 544 aa7□□□□□ -1.29
RNF4-217ENST00000511892 CTR9Q6PD62 1173 aa7□□□□□ -1.29
RNF4-217ENST00000511892 CATSPERGQ6ZRH7 1159 aa7□□□□□ -1.29
RNF4-217ENST00000511892 C16orf86Q6ZW13 317 aa7□□□□□ -1.29
RNF4-217ENST00000511892 UBE2Q1Q7Z7E8 422 aa7□□□□□ -1.29
RNF4-217ENST00000511892 CLEC10AQ8IUN9 316 aa7□□□□□ -1.29
RNF4-217ENST00000511892 GPRC5AQ8NFJ5 357 aa7□□□□□ -1.29
RNF4-217ENST00000511892 PXYLP1Q8TE99 480 aa7□□□□□ -1.29
RNF4-217ENST00000511892 COA7Q96BR5 231 aa7□□□□□ -1.29
RNF4-217ENST00000511892 FEZ1Q99689 392 aa7□□□□□ -1.29
RNF4-217ENST00000511892 RNF208Q9H0X6 261 aa7□□□□□ -1.29
RNF4-217ENST00000511892 PORCNQ9H237 461 aa7□□□□□ -1.29
RNF4-217ENST00000511892 CABP5Q9NP86 173 aa7□□□□□ -1.29
RNF4-217ENST00000511892 BIN2Q9UBW5 565 aaPredicted RBP7□□□□□ -1.29
RNF4-217ENST00000511892 ZNF236Q9UL36 1845 aa6.99□□□□□ -1.29
RNF4-217ENST00000511892 LAMA2P24043 3122 aaKnown RBP6.99□□□□□ -1.29
RNF4-217ENST00000511892 MCM3APO60318 1980 aa6.99□□□□□ -1.29
RNF4-217ENST00000511892 MPHOSPH10O00566 681 aaKnown RBP6.99□□□□□ -1.29
RNF4-217ENST00000511892 UBXN2AP68543 259 aa6.99□□□□□ -1.29
RNF4-217ENST00000511892 HDAC1Q13547 482 aaPredicted RBP6.99□□□□□ -1.29
RNF4-217ENST00000511892 AAMPQ13685 434 aa6.99□□□□□ -1.29
RNF4-217ENST00000511892 SBK1Q52WX2 424 aa6.99□□□□□ -1.29
RNF4-217ENST00000511892 LBX2Q6XYB7 198 aa6.99□□□□□ -1.29
RNF4-217ENST00000511892 TMEM179Q6ZVK1 233 aa6.99□□□□□ -1.29
RNF4-217ENST00000511892 PLPP6Q8IY26 295 aa6.99□□□□□ -1.29
RNF4-217ENST00000511892 APPBP2Q92624 585 aa6.99□□□□□ -1.29
RNF4-217ENST00000511892 USP6NLQ92738 828 aa6.99□□□□□ -1.29
RNF4-217ENST00000511892 KCTD12Q96CX2 325 aaKnown RBP6.99□□□□□ -1.29
RNF4-217ENST00000511892 GPATCH3Q96I76 525 aa6.99□□□□□ -1.29
RNF4-217ENST00000511892 SEC62Q99442 399 aaKnown RBP6.99□□□□□ -1.29
RNF4-217ENST00000511892 PAGR1Q9BTK6 254 aa6.99□□□□□ -1.29
RNF4-217ENST00000511892 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.99□□□□□ -1.29
RNF4-217ENST00000511892 RPAP3Q9H6T3 665 aaPredicted RBP6.99□□□□□ -1.29
RNF4-217ENST00000511892 EPB41L4AQ9HCS5 686 aaPredicted RBP6.99□□□□□ -1.29
RNF4-217ENST00000511892 PAK6Q9NQU5 681 aaPredicted RBP6.99□□□□□ -1.29
RNF4-217ENST00000511892 BTBD7Q9P203 1132 aa6.99□□□□□ -1.29
RNF4-217ENST00000511892 RABGAP1Q9Y3P9 1069 aa6.99□□□□□ -1.29
RNF4-217ENST00000511892 ROBO3Q96MS0 1386 aa6.98□□□□□ -1.29
RNF4-217ENST00000511892 SPDYE16A6NNV3 312 aaPredicted RBP6.98□□□□□ -1.29
RNF4-217ENST00000511892 ERC2O15083 957 aa6.98□□□□□ -1.29
RNF4-217ENST00000511892 GPAA1O43292 621 aa6.98□□□□□ -1.29
RNF4-217ENST00000511892 GLRX3O76003 335 aaKnown RBP6.98□□□□□ -1.29
RNF4-217ENST00000511892 SGPL1O95470 568 aa6.98□□□□□ -1.29
RNF4-217ENST00000511892 ZFYP08048 801 aaPredicted RBP6.98□□□□□ -1.29
RNF4-217ENST00000511892 XRCC5P13010 732 aaKnown RBP6.98□□□□□ -1.29
RNF4-217ENST00000511892 MX1P20591 662 aa6.98□□□□□ -1.29
RNF4-217ENST00000511892 CYP2B6P20813 491 aa6.98□□□□□ -1.29
RNF4-217ENST00000511892 MAPK4P31152 587 aa6.98□□□□□ -1.29
RNF4-217ENST00000511892 MORN1Q5T089 497 aa6.98□□□□□ -1.29
RNF4-217ENST00000511892 ANKRD45Q5TZF3 282 aa6.98□□□□□ -1.29
RNF4-217ENST00000511892 GIMAP6Q6P9H5 292 aa6.98□□□□□ -1.29
RNF4-217ENST00000511892 GPR142Q7Z601 462 aa6.98□□□□□ -1.29
RNF4-217ENST00000511892 NKX2-3Q8TAU0 364 aa6.98□□□□□ -1.29
RNF4-217ENST00000511892 U2AF1L4Q8WU68 220 aaKnown RBP6.98□□□□□ -1.29
RNF4-217ENST00000511892 GTF3C2Q8WUA4 911 aaPredicted RBP6.98□□□□□ -1.29
RNF4-217ENST00000511892 TRIB2Q92519 343 aa6.98□□□□□ -1.29
RNF4-217ENST00000511892 GCC1Q96CN9 775 aa6.98□□□□□ -1.29
RNF4-217ENST00000511892 CCDC17Q96LX7 622 aa6.98□□□□□ -1.29
RNF4-217ENST00000511892 CRISPLD2Q9H0B8 497 aa6.98□□□□□ -1.29
RNF4-217ENST00000511892 ARPP21Q9UBL0 812 aaPredicted RBP6.98□□□□□ -1.29
RNF4-217ENST00000511892 TMX2Q9Y320 296 aa6.98□□□□□ -1.29
RNF4-217ENST00000511892 LAMA4Q16363 1823 aa6.97□□□□□ -1.29
RNF4-217ENST00000511892 MINDY4BA8MYZ0 360 aa6.97□□□□□ -1.29
RNF4-217ENST00000511892 PATL2C9JE40 543 aaKnown RBP6.97□□□□□ -1.29
RNF4-217ENST00000511892 FOXP2O15409 715 aa6.97□□□□□ -1.29
RNF4-217ENST00000511892 IGHDP01880 384 aa6.97□□□□□ -1.29
RNF4-217ENST00000511892 HMGCRP04035 888 aa6.97□□□□□ -1.29
RNF4-217ENST00000511892 EEF2P13639 858 aaKnown RBP6.97□□□□□ -1.29
RNF4-217ENST00000511892 RASA1P20936 1047 aa6.97□□□□□ -1.29
RNF4-217ENST00000511892 IRX6P78412 446 aaPredicted RBP6.97□□□□□ -1.29
RNF4-217ENST00000511892 ICA1Q05084 483 aa6.97□□□□□ -1.29
RNF4-217ENST00000511892 COG2Q14746 738 aa6.97□□□□□ -1.29
RNF4-217ENST00000511892 CCL14Q16627 93 aa6.97□□□□□ -1.29
RNF4-217ENST00000511892 ZMYM1Q5SVZ6 1142 aa6.97□□□□□ -1.29
RNF4-217ENST00000511892 MAP3K21Q5TCX8 1036 aa6.97□□□□□ -1.29
RNF4-217ENST00000511892 PLEKHH3Q7Z736 793 aa6.97□□□□□ -1.29
RNF4-217ENST00000511892 AMOTL1Q8IY63 956 aa6.97□□□□□ -1.29
RNF4-217ENST00000511892 IFNL3Q8IZI9 196 aa6.97□□□□□ -1.29
RNF4-217ENST00000511892 SPICE1Q8N0Z3 855 aa6.97□□□□□ -1.29
RNF4-217ENST00000511892 STK11IPQ8N1F8 1099 aa6.97□□□□□ -1.29
RNF4-217ENST00000511892 DDRGK1Q96HY6 314 aa6.97□□□□□ -1.29
RNF4-217ENST00000511892 CCDC136Q96JN2 1154 aa6.97□□□□□ -1.29
RNF4-217ENST00000511892 DEFB118Q96PH6 123 aa6.97□□□□□ -1.29
RNF4-217ENST00000511892 NUDT12Q9BQG2 462 aa6.97□□□□□ -1.29
RNF4-217ENST00000511892 TANGO6Q9C0B7 1094 aa6.97□□□□□ -1.29
RNF4-217ENST00000511892 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.97□□□□□ -1.29
RNF4-217ENST00000511892 VCPKMTQ9H867 229 aa6.97□□□□□ -1.29
RNF4-217ENST00000511892 ARHGEF10LQ9HCE6 1279 aa6.97□□□□□ -1.29
RNF4-217ENST00000511892 STAP2Q9UGK3 403 aa6.97□□□□□ -1.29
RNF4-217ENST00000511892 IGKV6D-41A0A0C4DH26 115 aa6.96□□□□□ -1.3
RNF4-217ENST00000511892 WDR46O15213 610 aaKnown RBP6.96□□□□□ -1.3
RNF4-217ENST00000511892 TFRCP02786 760 aaKnown RBP6.96□□□□□ -1.3
RNF4-217ENST00000511892 GNAT2P19087 354 aa6.96□□□□□ -1.3
RNF4-217ENST00000511892 PTPREP23469 700 aa6.96□□□□□ -1.3
RNF4-217ENST00000511892 RGS2P41220 211 aa6.96□□□□□ -1.3
RNF4-217ENST00000511892 PDE1AP54750 535 aa6.96□□□□□ -1.3
RNF4-217ENST00000511892 CACNB2Q08289 660 aaPredicted RBP6.96□□□□□ -1.3
RNF4-217ENST00000511892 MAP2K5Q13163 448 aa6.96□□□□□ -1.3
RNF4-217ENST00000511892 GRB14Q14449 540 aa6.96□□□□□ -1.3
RNF4-217ENST00000511892 CCDC129Q6ZRS4 1044 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms