RNA–Protein interactions for RNA: ENST00000511408.1

NDNF-203, Transcript of neuron derived neurotrophic factor, humanhuman

TSL 4

Gene NDNF, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDNF-203ENST00000511408 PLA2G6O60733 806 aa17.12■□□□□ 0.33
NDNF-203ENST00000511408 BMP3P12645 472 aa17.12■□□□□ 0.33
NDNF-203ENST00000511408 GNAQP50148 359 aa17.12■□□□□ 0.33
NDNF-203ENST00000511408 CLEC10AQ8IUN9 316 aa17.12■□□□□ 0.33
NDNF-203ENST00000511408 SIAH1Q8IUQ4 282 aa17.12■□□□□ 0.33
NDNF-203ENST00000511408 CTCFLQ8NI51 663 aaPredicted RBP17.12■□□□□ 0.33
NDNF-203ENST00000511408 AGXT2Q9BYV1 514 aa17.12■□□□□ 0.33
NDNF-203ENST00000511408 TANGO6Q9C0B7 1094 aa17.12■□□□□ 0.33
NDNF-203ENST00000511408 ALDH8A1Q9H2A2 487 aaPredicted RBP17.12■□□□□ 0.33
NDNF-203ENST00000511408 EMILIN3Q9NT22 766 aa17.12■□□□□ 0.33
NDNF-203ENST00000511408 ISY1Q9ULR0 285 aaKnown RBP17.12■□□□□ 0.33
NDNF-203ENST00000511408 BTBD19C9JJ37 291 aa17.11■□□□□ 0.33
NDNF-203ENST00000511408 STAT2P52630 851 aa17.11■□□□□ 0.33
NDNF-203ENST00000511408 CCDC96Q2M329 555 aa17.11■□□□□ 0.33
NDNF-203ENST00000511408 MB21D1Q8N884 522 aa17.11■□□□□ 0.33
NDNF-203ENST00000511408 SMCR8Q8TEV9 937 aaPredicted RBP17.11■□□□□ 0.33
NDNF-203ENST00000511408 RPAP3Q9H6T3 665 aaPredicted RBP17.11■□□□□ 0.33
NDNF-203ENST00000511408 ZFYVE28Q9HCC9 887 aa17.11■□□□□ 0.33
NDNF-203ENST00000511408 RBM28Q9NW13 759 aaKnown RBP17.11■□□□□ 0.33
NDNF-203ENST00000511408 HOXC10Q9NYD6 342 aa17.11■□□□□ 0.33
NDNF-203ENST00000511408 PDHXO00330 501 aa17.1■□□□□ 0.33
NDNF-203ENST00000511408 PARP1P09874 1014 aaKnown RBP17.1■□□□□ 0.33
NDNF-203ENST00000511408 SNHG28P0DPA3 235 aa17.1■□□□□ 0.33
NDNF-203ENST00000511408 PDHBP11177 359 aa17.1■□□□□ 0.33
NDNF-203ENST00000511408 GCLCP48506 637 aaPredicted RBP17.1■□□□□ 0.33
NDNF-203ENST00000511408 MCM2P49736 904 aa17.1■□□□□ 0.33
NDNF-203ENST00000511408 HTRA3P83110 453 aa17.1■□□□□ 0.33
NDNF-203ENST00000511408 IKQ13123 557 aaPredicted RBP17.1■□□□□ 0.33
NDNF-203ENST00000511408 Q6ZUG5 572 aa17.1■□□□□ 0.33
NDNF-203ENST00000511408 CHST3Q7LGC8 479 aa17.1■□□□□ 0.33
NDNF-203ENST00000511408 ZNF654Q8IZM8 581 aa17.1■□□□□ 0.33
NDNF-203ENST00000511408 LZTS2Q9BRK4 669 aa17.1■□□□□ 0.33
NDNF-203ENST00000511408 CFHR5Q9BXR6 569 aa17.1■□□□□ 0.33
NDNF-203ENST00000511408 UPF3BQ9BZI7 483 aaKnown RBP17.1■□□□□ 0.33
NDNF-203ENST00000511408 ZBTB43O43298 467 aa17.09■□□□□ 0.33
NDNF-203ENST00000511408 AOC2O75106 756 aa17.09■□□□□ 0.33
NDNF-203ENST00000511408 NEK4P51957 841 aa17.09■□□□□ 0.33
NDNF-203ENST00000511408 TRAF1Q13077 416 aa17.09■□□□□ 0.33
NDNF-203ENST00000511408 COG2Q14746 738 aa17.09■□□□□ 0.33
NDNF-203ENST00000511408 TAF1CQ15572 869 aaPredicted RBP17.09■□□□□ 0.33
NDNF-203ENST00000511408 APOA5Q6Q788 366 aa17.09■□□□□ 0.33
NDNF-203ENST00000511408 CATSPERGQ6ZRH7 1159 aa17.09■□□□□ 0.33
NDNF-203ENST00000511408 SPICE1Q8N0Z3 855 aa17.09■□□□□ 0.33
NDNF-203ENST00000511408 CTDP1Q9Y5B0 961 aaPredicted RBP17.09■□□□□ 0.33
NDNF-203ENST00000511408 DHX16O60231 1041 aaKnown RBP17.08■□□□□ 0.32
NDNF-203ENST00000511408 FLOT1O75955 427 aa17.08■□□□□ 0.32
NDNF-203ENST00000511408 COPB2P35606 906 aa17.08■□□□□ 0.32
NDNF-203ENST00000511408 ZNF543Q08ER8 600 aa17.08■□□□□ 0.32
NDNF-203ENST00000511408 MOGSQ13724 837 aa17.08■□□□□ 0.32
NDNF-203ENST00000511408 FAM83BQ5T0W9 1011 aa17.08■□□□□ 0.32
NDNF-203ENST00000511408 GPAT2Q6NUI2 795 aa17.08■□□□□ 0.32
NDNF-203ENST00000511408 CPLX2Q6PUV4 134 aaKnown RBP17.08■□□□□ 0.32
NDNF-203ENST00000511408 LBX2Q6XYB7 198 aa17.08■□□□□ 0.32
NDNF-203ENST00000511408 PRPF38AQ8NAV1 312 aaKnown RBP17.08■□□□□ 0.32
NDNF-203ENST00000511408 BRF1Q92994 677 aa17.08■□□□□ 0.32
NDNF-203ENST00000511408 SLF1Q9BQI6 1058 aa17.08■□□□□ 0.32
NDNF-203ENST00000511408 NID2Q14112 1375 aa17.07■□□□□ 0.32
NDNF-203ENST00000511408 KLF18A0A0U1RQI7 1052 aa17.07■□□□□ 0.32
NDNF-203ENST00000511408 GOLGA8BA8MQT2 603 aa17.07■□□□□ 0.32
NDNF-203ENST00000511408 SMARCA1P28370 1054 aa17.07■□□□□ 0.32
NDNF-203ENST00000511408 EVCP57679 992 aa17.07■□□□□ 0.32
NDNF-203ENST00000511408 TROAPQ12815 778 aa17.07■□□□□ 0.32
NDNF-203ENST00000511408 GRM4Q14833 912 aa17.07■□□□□ 0.32
NDNF-203ENST00000511408 NUP133Q8WUM0 1156 aa17.07■□□□□ 0.32
NDNF-203ENST00000511408 ZNF274Q96GC6 653 aaPredicted RBP17.07■□□□□ 0.32
NDNF-203ENST00000511408 LRRC2Q9BYS8 371 aa17.07■□□□□ 0.32
NDNF-203ENST00000511408 ASCC2Q9H1I8 757 aaPredicted RBP17.07■□□□□ 0.32
NDNF-203ENST00000511408 RBM27Q9P2N5 1060 aaKnown RBP17.07■□□□□ 0.32
NDNF-203ENST00000511408 PPP1R9AQ9ULJ8 1098 aa17.07■□□□□ 0.32
NDNF-203ENST00000511408 IGF2BP3O00425 579 aaKnown RBP eCLIP17.06■□□□□ 0.32
NDNF-203ENST00000511408 METAP2P50579 478 aaKnown RBP eCLIP17.06■□□□□ 0.32
NDNF-203ENST00000511408 CCNA1P78396 465 aa17.06■□□□□ 0.32
NDNF-203ENST00000511408 NOM1Q5C9Z4 860 aaKnown RBP17.06■□□□□ 0.32
NDNF-203ENST00000511408 TREML2Q5T2D2 321 aa17.06■□□□□ 0.32
NDNF-203ENST00000511408 BTNL9Q6UXG8 535 aa17.06■□□□□ 0.32
NDNF-203ENST00000511408 MICU3Q86XE3 530 aa17.06■□□□□ 0.32
NDNF-203ENST00000511408 FAM43AQ8N2R8 423 aa17.06■□□□□ 0.32
NDNF-203ENST00000511408 DNAJC5GQ8N7S2 189 aa17.06■□□□□ 0.32
NDNF-203ENST00000511408 JMYQ8N9B5 988 aa17.06■□□□□ 0.32
NDNF-203ENST00000511408 ZSCAN31Q96LW9 406 aaPredicted RBP17.06■□□□□ 0.32
NDNF-203ENST00000511408 NAP1L2Q9ULW6 460 aaPredicted RBP17.06■□□□□ 0.32
NDNF-203ENST00000511408 MTMR7Q9Y216 660 aa17.06■□□□□ 0.32
NDNF-203ENST00000511408 GOLGA8AA7E2F4 631 aa17.05■□□□□ 0.32
NDNF-203ENST00000511408 TMEM232C9JQI7 657 aa17.05■□□□□ 0.32
NDNF-203ENST00000511408 ZBED4O75132 1171 aa17.05■□□□□ 0.32
NDNF-203ENST00000511408 OAZ1P54368 228 aa17.05■□□□□ 0.32
NDNF-203ENST00000511408 HERVK_113P62684 666 aa17.05■□□□□ 0.32
NDNF-203ENST00000511408 ARHGEF6Q15052 776 aa17.05■□□□□ 0.32
NDNF-203ENST00000511408 RTN1Q16799 776 aa17.05■□□□□ 0.32
NDNF-203ENST00000511408 TCEANC2Q96MN5 208 aa17.05■□□□□ 0.32
NDNF-203ENST00000511408 PTPN18Q99952 460 aa17.05■□□□□ 0.32
NDNF-203ENST00000511408 SH2B1Q9NRF2 756 aaPredicted RBP17.05■□□□□ 0.32
NDNF-203ENST00000511408 RABGAP1Q9Y3P9 1069 aa17.05■□□□□ 0.32
NDNF-203ENST00000511408 TLR2O60603 784 aa17.04■□□□□ 0.32
NDNF-203ENST00000511408 CDKL5O76039 1030 aa17.04■□□□□ 0.32
NDNF-203ENST00000511408 CPA1P15085 419 aa17.04■□□□□ 0.32
NDNF-203ENST00000511408 DSG3P32926 999 aa17.04■□□□□ 0.32
NDNF-203ENST00000511408 FAM110CQ1W6H9 321 aa17.04■□□□□ 0.32
NDNF-203ENST00000511408 SYDE2Q5VT97 1194 aa17.04■□□□□ 0.32
NDNF-203ENST00000511408 FANCBQ8NB91 859 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms